RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 IL18RAPO95256 599 aa17.96■□□□□ 0.47
CAPN1-205ENST00000526954 PSMC2P35998 433 aaKnown RBP17.96■□□□□ 0.47
CAPN1-205ENST00000526954 ZNF165P49910 485 aa17.96■□□□□ 0.47
CAPN1-205ENST00000526954 ENPEPQ07075 957 aa17.96■□□□□ 0.47
CAPN1-205ENST00000526954 CYP24A1Q07973 514 aa17.96■□□□□ 0.47
CAPN1-205ENST00000526954 GLB1LQ6UWU2 654 aa17.96■□□□□ 0.47
CAPN1-205ENST00000526954 RDH13Q8NBN7 331 aa17.96■□□□□ 0.47
CAPN1-205ENST00000526954 GSTCDQ8NEC7 633 aa17.96■□□□□ 0.47
CAPN1-205ENST00000526954 NOC3LQ8WTT2 800 aaKnown RBP17.96■□□□□ 0.47
CAPN1-205ENST00000526954 ZNF689Q96CS4 500 aaPredicted RBP17.96■□□□□ 0.47
CAPN1-205ENST00000526954 BORCS6Q96GS4 357 aa17.96■□□□□ 0.47
CAPN1-205ENST00000526954 CASD1Q96PB1 797 aa17.96■□□□□ 0.47
CAPN1-205ENST00000526954 GAD1Q99259 594 aa17.96■□□□□ 0.47
CAPN1-205ENST00000526954 TMEM117Q9H0C3 514 aa17.96■□□□□ 0.47
CAPN1-205ENST00000526954 TSPY26PQ9H489 355 aa17.96■□□□□ 0.47
CAPN1-205ENST00000526954 THAP9Q9H5L6 903 aa17.96■□□□□ 0.47
CAPN1-205ENST00000526954 ASB7Q9H672 318 aa17.96■□□□□ 0.47
CAPN1-205ENST00000526954 RC3H2Q9HBD1 1191 aaKnown RBP17.96■□□□□ 0.47
CAPN1-205ENST00000526954 RBAKQ9NYW8 714 aaPredicted RBP17.96■□□□□ 0.47
CAPN1-205ENST00000526954 CNTN3Q9P232 1028 aa17.96■□□□□ 0.47
CAPN1-205ENST00000526954 COL4A6Q14031 1691 aa17.96■□□□□ 0.47
CAPN1-205ENST00000526954 LACTBL1A8MY62 500 aa17.95■□□□□ 0.46
CAPN1-205ENST00000526954 GJB5O95377 273 aa17.95■□□□□ 0.46
CAPN1-205ENST00000526954 GNA14O95837 355 aa17.95■□□□□ 0.46
CAPN1-205ENST00000526954 EPB41P11171 864 aaKnown RBP17.95■□□□□ 0.46
CAPN1-205ENST00000526954 FGFR1P11362 822 aa17.95■□□□□ 0.46
CAPN1-205ENST00000526954 KCNE1P15382 129 aa17.95■□□□□ 0.46
CAPN1-205ENST00000526954 ATP2A2P16615 1042 aaKnown RBP17.95■□□□□ 0.46
CAPN1-205ENST00000526954 IBSPP21815 317 aaPredicted RBP17.95■□□□□ 0.46
CAPN1-205ENST00000526954 MYL5Q02045 173 aa17.95■□□□□ 0.46
CAPN1-205ENST00000526954 PPP2R3AQ06190 1150 aa17.95■□□□□ 0.46
CAPN1-205ENST00000526954 NCAPHQ15003 741 aa17.95■□□□□ 0.46
CAPN1-205ENST00000526954 PSMD6Q15008 389 aa17.95■□□□□ 0.46
CAPN1-205ENST00000526954 SURF1Q15526 300 aa17.95■□□□□ 0.46
CAPN1-205ENST00000526954 HERC6Q8IVU3 1022 aa17.95■□□□□ 0.46
CAPN1-205ENST00000526954 FAM186BQ8IYM0 893 aa17.95■□□□□ 0.46
CAPN1-205ENST00000526954 EEF2KMTQ96G04 330 aa17.95■□□□□ 0.46
CAPN1-205ENST00000526954 ZFP42Q96MM3 310 aa17.95■□□□□ 0.46
CAPN1-205ENST00000526954 KLK14Q9P0G3 267 aa17.95■□□□□ 0.46
CAPN1-205ENST00000526954 KANSL3Q9P2N6 904 aa17.95■□□□□ 0.46
CAPN1-205ENST00000526954 PTGESO14684 152 aa17.94■□□□□ 0.46
CAPN1-205ENST00000526954 MLH1P40692 756 aa17.94■□□□□ 0.46
CAPN1-205ENST00000526954 MARSP56192 900 aaKnown RBP17.94■□□□□ 0.46
CAPN1-205ENST00000526954 HTRA4P83105 476 aaPredicted RBP17.94■□□□□ 0.46
CAPN1-205ENST00000526954 IQCB1Q15051 598 aa17.94■□□□□ 0.46
CAPN1-205ENST00000526954 TPD52L1Q16890 204 aaPredicted RBP17.94■□□□□ 0.46
CAPN1-205ENST00000526954 NOMO2Q5JPE7 1267 aa17.94■□□□□ 0.46
CAPN1-205ENST00000526954 INTS8Q75QN2 995 aaKnown RBP17.94■□□□□ 0.46
CAPN1-205ENST00000526954 FRMD5Q7Z6J6 570 aa17.94■□□□□ 0.46
CAPN1-205ENST00000526954 TMCO2Q7Z6W1 182 aaPredicted RBP17.94■□□□□ 0.46
CAPN1-205ENST00000526954 IRF2BP1Q8IU81 584 aa17.94■□□□□ 0.46
CAPN1-205ENST00000526954 DHX40Q8IX18 779 aaKnown RBP17.94■□□□□ 0.46
CAPN1-205ENST00000526954 TDHQ8IZJ6 230 aa17.94■□□□□ 0.46
CAPN1-205ENST00000526954 ABI1Q8IZP0 508 aa17.94■□□□□ 0.46
CAPN1-205ENST00000526954 HELQQ8TDG4 1101 aa17.94■□□□□ 0.46
CAPN1-205ENST00000526954 TMC2Q8TDI7 906 aa17.94■□□□□ 0.46
CAPN1-205ENST00000526954 CXCL16Q9H2A7 254 aa17.94■□□□□ 0.46
CAPN1-205ENST00000526954 METTL14Q9HCE5 456 aaKnown RBP17.94■□□□□ 0.46
CAPN1-205ENST00000526954 DERAQ9Y315 318 aa17.94■□□□□ 0.46
CAPN1-205ENST00000526954 NFE2L3Q9Y4A8 694 aa17.94■□□□□ 0.46
CAPN1-205ENST00000526954 SMIM28A0A1B0GU29 152 aa17.93■□□□□ 0.46
CAPN1-205ENST00000526954 SMTNL1A8MU46 457 aa17.93■□□□□ 0.46
CAPN1-205ENST00000526954 GATMP50440 423 aa17.93■□□□□ 0.46
CAPN1-205ENST00000526954 AFF1P51825 1210 aaKnown RBP17.93■□□□□ 0.46
CAPN1-205ENST00000526954 WNT7BP56706 349 aa17.93■□□□□ 0.46
CAPN1-205ENST00000526954 CLDN10P78369 228 aa17.93■□□□□ 0.46
CAPN1-205ENST00000526954 ZBTB6Q15916 424 aa17.93■□□□□ 0.46
CAPN1-205ENST00000526954 NT5DC4Q86YG4 428 aa17.93■□□□□ 0.46
CAPN1-205ENST00000526954 AOPEPQ8N6M6 819 aa17.93■□□□□ 0.46
CAPN1-205ENST00000526954 URGCPQ8TCY9 931 aa17.93■□□□□ 0.46
CAPN1-205ENST00000526954 PARD3BQ8TEW8 1205 aa17.93■□□□□ 0.46
CAPN1-205ENST00000526954 ZMAT2Q96NC0 199 aaKnown RBP17.93■□□□□ 0.46
CAPN1-205ENST00000526954 PPP1R10Q96QC0 940 aaKnown RBP17.93■□□□□ 0.46
CAPN1-205ENST00000526954 RPS6KC1Q96S38 1066 aa17.93■□□□□ 0.46
CAPN1-205ENST00000526954 MRPL9Q9BYD2 267 aaKnown RBP17.93■□□□□ 0.46
CAPN1-205ENST00000526954 CBX8Q9HC52 389 aa17.93■□□□□ 0.46
CAPN1-205ENST00000526954 PDE11AQ9HCR9 933 aa17.93■□□□□ 0.46
CAPN1-205ENST00000526954 MIOSQ9NXC5 875 aa17.93■□□□□ 0.46
CAPN1-205ENST00000526954 C2CD2Q9Y426 696 aa17.93■□□□□ 0.46
CAPN1-205ENST00000526954 INSL6Q9Y581 213 aa17.93■□□□□ 0.46
CAPN1-205ENST00000526954 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.93■□□□□ 0.46
CAPN1-205ENST00000526954 GBF1Q92538 1859 aa17.92■□□□□ 0.46
CAPN1-205ENST00000526954 THP07101 528 aa17.92■□□□□ 0.46
CAPN1-205ENST00000526954 KRT13P13646 458 aa17.92■□□□□ 0.46
CAPN1-205ENST00000526954 SCNN1GP51170 649 aa17.92■□□□□ 0.46
CAPN1-205ENST00000526954 GRIK3Q13003 919 aa17.92■□□□□ 0.46
CAPN1-205ENST00000526954 CHRDL2Q6WN34 429 aa17.92■□□□□ 0.46
CAPN1-205ENST00000526954 USP37Q86T82 979 aa17.92■□□□□ 0.46
CAPN1-205ENST00000526954 FAM114A1Q8IWE2 563 aa17.92■□□□□ 0.46
CAPN1-205ENST00000526954 CMTR2Q8IYT2 770 aaKnown RBP17.92■□□□□ 0.46
CAPN1-205ENST00000526954 FAM200AQ8TCP9 573 aa17.92■□□□□ 0.46
CAPN1-205ENST00000526954 PLEKHO2Q8TD55 490 aa17.92■□□□□ 0.46
CAPN1-205ENST00000526954 FAM212AQ96EL1 285 aa17.92■□□□□ 0.46
CAPN1-205ENST00000526954 RAD9AQ99638 391 aa17.92■□□□□ 0.46
CAPN1-205ENST00000526954 ZBED2Q9BTP6 218 aa17.92■□□□□ 0.46
CAPN1-205ENST00000526954 FANCLQ9NW38 375 aa17.92■□□□□ 0.46
CAPN1-205ENST00000526954 ARMCX3Q9UH62 379 aaPredicted RBP17.92■□□□□ 0.46
CAPN1-205ENST00000526954 TBKBP1A7MCY6 615 aa17.91■□□□□ 0.46
CAPN1-205ENST00000526954 VAMP7P51809 220 aa17.91■□□□□ 0.46
CAPN1-205ENST00000526954 BFSP1Q12934 665 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms