RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 TRMT1LQ7Z2T5 733 aaKnown RBP12.48□□□□□ -0.41
LINC01001-201ENST00000526704 C4orf19Q8IY42 314 aa12.48□□□□□ -0.41
LINC01001-201ENST00000526704 C1orf54Q8WWF1 131 aa12.48□□□□□ -0.41
LINC01001-201ENST00000526704 NT5C1BQ96P26 610 aa12.48□□□□□ -0.41
LINC01001-201ENST00000526704 SIP14410 1827 aa12.48□□□□□ -0.41
LINC01001-201ENST00000526704 MYH9P35579 1960 aaKnown RBP12.48□□□□□ -0.41
LINC01001-201ENST00000526704 CCT8L1PA6NM43 557 aa12.48□□□□□ -0.41
LINC01001-201ENST00000526704 FSCN2O14926 492 aa12.48□□□□□ -0.41
LINC01001-201ENST00000526704 TBC1D12O60347 775 aa12.48□□□□□ -0.41
LINC01001-201ENST00000526704 DNAJC8O75937 253 aaPredicted RBP12.48□□□□□ -0.41
LINC01001-201ENST00000526704 HMGB2P26583 209 aaKnown RBP12.48□□□□□ -0.41
LINC01001-201ENST00000526704 PSEN1P49768 467 aa12.48□□□□□ -0.41
LINC01001-201ENST00000526704 XRCC4Q13426 336 aa12.48□□□□□ -0.41
LINC01001-201ENST00000526704 ITIH4Q14624 930 aa12.48□□□□□ -0.41
LINC01001-201ENST00000526704 DLGAP5Q15398 846 aa12.48□□□□□ -0.41
LINC01001-201ENST00000526704 CNGA2Q16280 664 aa12.48□□□□□ -0.41
LINC01001-201ENST00000526704 CLEC16AQ2KHT3 1053 aa12.48□□□□□ -0.41
LINC01001-201ENST00000526704 RHBDF2Q6PJF5 856 aa12.48□□□□□ -0.41
LINC01001-201ENST00000526704 FBXL13Q8NEE6 735 aa12.48□□□□□ -0.41
LINC01001-201ENST00000526704 FLAD1Q8NFF5 587 aa12.48□□□□□ -0.41
LINC01001-201ENST00000526704 SYTL5Q8TDW5 730 aaPredicted RBP12.48□□□□□ -0.41
LINC01001-201ENST00000526704 CNKSR1Q969H4 720 aa12.48□□□□□ -0.41
LINC01001-201ENST00000526704 HERPUD2Q9BSE4 406 aa12.48□□□□□ -0.41
LINC01001-201ENST00000526704 STMN4Q9H169 189 aaPredicted RBP12.48□□□□□ -0.41
LINC01001-201ENST00000526704 VEZTQ9HBM0 779 aa12.48□□□□□ -0.41
LINC01001-201ENST00000526704 A1CFQ9NQ94 594 aaKnown RBP12.48□□□□□ -0.41
LINC01001-201ENST00000526704 TBC1D22BQ9NU19 505 aa12.48□□□□□ -0.41
LINC01001-201ENST00000526704 WHRNQ9P202 907 aa12.48□□□□□ -0.41
LINC01001-201ENST00000526704 TULP1O00294 542 aaPredicted RBP12.47□□□□□ -0.41
LINC01001-201ENST00000526704 CCNE2O96020 404 aa12.47□□□□□ -0.41
LINC01001-201ENST00000526704 EIF2AK2P19525 551 aaKnown RBP12.47□□□□□ -0.41
LINC01001-201ENST00000526704 CHKAP35790 457 aa12.47□□□□□ -0.41
LINC01001-201ENST00000526704 NPTX2P47972 431 aa12.47□□□□□ -0.41
LINC01001-201ENST00000526704 CALCOCO2Q13137 446 aa12.47□□□□□ -0.41
LINC01001-201ENST00000526704 SGO2Q562F6 1265 aa12.47□□□□□ -0.41
LINC01001-201ENST00000526704 XKR9Q5GH70 373 aa12.47□□□□□ -0.41
LINC01001-201ENST00000526704 TRMT10CQ7L0Y3 403 aaKnown RBP12.47□□□□□ -0.41
LINC01001-201ENST00000526704 CCDC91Q7Z6B0 441 aa12.47□□□□□ -0.41
LINC01001-201ENST00000526704 SLC17A8Q8NDX2 589 aa12.47□□□□□ -0.41
LINC01001-201ENST00000526704 BSNDQ8WZ55 320 aa12.47□□□□□ -0.41
LINC01001-201ENST00000526704 ZKSCAN4Q969J2 545 aaPredicted RBP12.47□□□□□ -0.41
LINC01001-201ENST00000526704 MFSD14AQ96MC6 490 aa12.47□□□□□ -0.41
LINC01001-201ENST00000526704 GMLQ99445 158 aa12.47□□□□□ -0.41
LINC01001-201ENST00000526704 TRIM7Q9C029 511 aa12.47□□□□□ -0.41
LINC01001-201ENST00000526704 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.47□□□□□ -0.41
LINC01001-201ENST00000526704 EXOC7Q9UPT5 735 aa12.47□□□□□ -0.41
LINC01001-201ENST00000526704 MROH7Q68CQ1 1323 aa12.47□□□□□ -0.41
LINC01001-201ENST00000526704 ATP9AO75110 1047 aa12.47□□□□□ -0.41
LINC01001-201ENST00000526704 CNGA1P29973 690 aa12.47□□□□□ -0.41
LINC01001-201ENST00000526704 IFNAR2P48551 515 aa12.47□□□□□ -0.41
LINC01001-201ENST00000526704 PSMC5P62195 406 aa12.47□□□□□ -0.41
LINC01001-201ENST00000526704 SNX1Q13596 522 aa12.47□□□□□ -0.41
LINC01001-201ENST00000526704 PGM5Q15124 567 aa12.47□□□□□ -0.41
LINC01001-201ENST00000526704 LONRF1Q17RB8 773 aa12.47□□□□□ -0.41
LINC01001-201ENST00000526704 EXOC3L1Q86VI1 746 aa12.47□□□□□ -0.41
LINC01001-201ENST00000526704 MCF2L2Q86YR7 1114 aa12.47□□□□□ -0.41
LINC01001-201ENST00000526704 PARP9Q8IXQ6 854 aa12.47□□□□□ -0.41
LINC01001-201ENST00000526704 SGSM3Q96HU1 749 aa12.47□□□□□ -0.41
LINC01001-201ENST00000526704 FBXL18Q96ME1 805 aa12.47□□□□□ -0.41
LINC01001-201ENST00000526704 TAAR1Q96RJ0 339 aa12.47□□□□□ -0.41
LINC01001-201ENST00000526704 ROPN1BQ9BZX4 212 aaPredicted RBP12.47□□□□□ -0.41
LINC01001-201ENST00000526704 ROPN1Q9HAT0 212 aaPredicted RBP12.47□□□□□ -0.41
LINC01001-201ENST00000526704 CHST7Q9NS84 486 aa12.47□□□□□ -0.41
LINC01001-201ENST00000526704 HOMER2Q9NSB8 354 aa12.47□□□□□ -0.41
LINC01001-201ENST00000526704 RAB20Q9NX57 234 aa12.47□□□□□ -0.41
LINC01001-201ENST00000526704 ANAPC7Q9UJX3 599 aa12.47□□□□□ -0.41
LINC01001-201ENST00000526704 DENND3A2RUS2 1198 aa12.46□□□□□ -0.41
LINC01001-201ENST00000526704 CHUKO15111 745 aa12.46□□□□□ -0.41
LINC01001-201ENST00000526704 ACSL3O95573 720 aa12.46□□□□□ -0.41
LINC01001-201ENST00000526704 CYP24A1Q07973 514 aa12.46□□□□□ -0.41
LINC01001-201ENST00000526704 SF3A3Q12874 501 aaKnown RBP eCLIP12.46□□□□□ -0.41
LINC01001-201ENST00000526704 TAOK1Q7L7X3 1001 aa12.46□□□□□ -0.41
LINC01001-201ENST00000526704 TAX1BP1Q86VP1 789 aa12.46□□□□□ -0.41
LINC01001-201ENST00000526704 ANKS4BQ8N8V4 417 aa12.46□□□□□ -0.41
LINC01001-201ENST00000526704 SUPT20HQ8NEM7 779 aa12.46□□□□□ -0.41
LINC01001-201ENST00000526704 TMC2Q8TDI7 906 aa12.46□□□□□ -0.41
LINC01001-201ENST00000526704 ATG4AQ8WYN0 398 aa12.46□□□□□ -0.41
LINC01001-201ENST00000526704 KIFAP3Q92845 792 aa12.46□□□□□ -0.41
LINC01001-201ENST00000526704 FAM84AQ96KN4 292 aa12.46□□□□□ -0.41
LINC01001-201ENST00000526704 ZNF341Q9BYN7 854 aa12.46□□□□□ -0.41
LINC01001-201ENST00000526704 CCDC113Q9H0I3 377 aa12.46□□□□□ -0.41
LINC01001-201ENST00000526704 SLC12A4Q9UP95 1085 aa12.46□□□□□ -0.41
LINC01001-201ENST00000526704 RAD17O75943 681 aa12.46□□□□□ -0.42
LINC01001-201ENST00000526704 UNGP13051 313 aaPredicted RBP12.46□□□□□ -0.42
LINC01001-201ENST00000526704 IVDP26440 423 aa12.46□□□□□ -0.42
LINC01001-201ENST00000526704 MAPK4P31152 587 aa12.46□□□□□ -0.42
LINC01001-201ENST00000526704 JAK3P52333 1124 aa12.46□□□□□ -0.42
LINC01001-201ENST00000526704 DMP1Q13316 513 aaPredicted RBP12.46□□□□□ -0.42
LINC01001-201ENST00000526704 PTK6Q13882 451 aa12.46□□□□□ -0.42
LINC01001-201ENST00000526704 ANO5Q75V66 913 aa12.46□□□□□ -0.42
LINC01001-201ENST00000526704 FAM228AQ86W67 206 aa12.46□□□□□ -0.42
LINC01001-201ENST00000526704 CPXCR1Q8N123 301 aa12.46□□□□□ -0.42
LINC01001-201ENST00000526704 PI4K2AQ9BTU6 479 aa12.46□□□□□ -0.42
LINC01001-201ENST00000526704 RAVER2Q9HCJ3 691 aaKnown RBP12.46□□□□□ -0.42
LINC01001-201ENST00000526704 ANKEF1Q9NU02 776 aa12.46□□□□□ -0.42
LINC01001-201ENST00000526704 ASIC3Q9UHC3 531 aa12.46□□□□□ -0.42
LINC01001-201ENST00000526704 PGAP2Q9UHJ9 254 aa12.46□□□□□ -0.42
LINC01001-201ENST00000526704 ADGRA3Q8IWK6 1321 aa12.45□□□□□ -0.42
LINC01001-201ENST00000526704 WDR64B1ANS9 1081 aa12.45□□□□□ -0.42
LINC01001-201ENST00000526704 OAS1P00973 400 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms