RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 CRELD2Q6UXH1 353 aaPredicted RBP14.09□□□□□ -0.15
SMPD1-202ENST00000526280 HS2ST1Q7LGA3 356 aa14.09□□□□□ -0.15
SMPD1-202ENST00000526280 COLGALT2Q8IYK4 626 aa14.09□□□□□ -0.15
SMPD1-202ENST00000526280 SMYD4Q8IYR2 804 aaPredicted RBP14.09□□□□□ -0.15
SMPD1-202ENST00000526280 GUF1Q8N442 669 aaKnown RBP14.09□□□□□ -0.15
SMPD1-202ENST00000526280 FBXO22Q8NEZ5 403 aa14.09□□□□□ -0.15
SMPD1-202ENST00000526280 GOLGA5Q8TBA6 731 aa14.09□□□□□ -0.15
SMPD1-202ENST00000526280 P2RX5Q93086 422 aa14.09□□□□□ -0.15
SMPD1-202ENST00000526280 FAM193BQ96PV7 902 aaPredicted RBP14.09□□□□□ -0.15
SMPD1-202ENST00000526280 PCIF1Q9H4Z3 704 aa14.09□□□□□ -0.15
SMPD1-202ENST00000526280 RPF1Q9H9Y2 349 aaKnown RBP14.09□□□□□ -0.15
SMPD1-202ENST00000526280 PLEKHA5Q9HAU0 1116 aa14.09□□□□□ -0.15
SMPD1-202ENST00000526280 MTMR10Q9NXD2 777 aa14.09□□□□□ -0.15
SMPD1-202ENST00000526280 CNTN3Q9P232 1028 aa14.09□□□□□ -0.15
SMPD1-202ENST00000526280 KIAA1468Q9P260 1216 aa14.09□□□□□ -0.15
SMPD1-202ENST00000526280 DNAJB4Q9UDY4 337 aa14.09□□□□□ -0.15
SMPD1-202ENST00000526280 MAN1B1Q9UKM7 699 aa14.09□□□□□ -0.15
SMPD1-202ENST00000526280 MAPK8IP1Q9UQF2 711 aa14.09□□□□□ -0.15
SMPD1-202ENST00000526280 PCDHB12Q9Y5F1 795 aa14.09□□□□□ -0.15
SMPD1-202ENST00000526280 CITO14578 2027 aa14.09□□□□□ -0.15
SMPD1-202ENST00000526280 KIAA1671Q9BY89 1806 aa14.08□□□□□ -0.15
SMPD1-202ENST00000526280 TDRD15B5MCY1 1934 aaKnown RBP14.08□□□□□ -0.16
SMPD1-202ENST00000526280 SMIM28A0A1B0GU29 152 aa14.08□□□□□ -0.16
SMPD1-202ENST00000526280 CARNS1A5YM72 827 aa14.08□□□□□ -0.16
SMPD1-202ENST00000526280 H3BNC9 293 aa14.08□□□□□ -0.16
SMPD1-202ENST00000526280 PDXKO00764 312 aa14.08□□□□□ -0.16
SMPD1-202ENST00000526280 EXTL3O43909 919 aa14.08□□□□□ -0.16
SMPD1-202ENST00000526280 ZC3H11AO75152 810 aaKnown RBP eCLIP14.08□□□□□ -0.16
SMPD1-202ENST00000526280 LDHAP00338 332 aaKnown RBP14.08□□□□□ -0.16
SMPD1-202ENST00000526280 GALTP07902 379 aa14.08□□□□□ -0.16
SMPD1-202ENST00000526280 CXCL8P10145 99 aa14.08□□□□□ -0.16
SMPD1-202ENST00000526280 ALDH7A1P49419 539 aaKnown RBP14.08□□□□□ -0.16
SMPD1-202ENST00000526280 NAB2Q15742 525 aa14.08□□□□□ -0.16
SMPD1-202ENST00000526280 COBLL1Q53SF7 1204 aa14.08□□□□□ -0.16
SMPD1-202ENST00000526280 C12orf56Q8IXR9 622 aa14.08□□□□□ -0.16
SMPD1-202ENST00000526280 ZSWIM2Q8NEG5 633 aa14.08□□□□□ -0.16
SMPD1-202ENST00000526280 SAAL1Q96ER3 474 aa14.08□□□□□ -0.16
SMPD1-202ENST00000526280 ZMAT2Q96NC0 199 aaKnown RBP14.08□□□□□ -0.16
SMPD1-202ENST00000526280 ZNF558Q96NG5 402 aa14.08□□□□□ -0.16
SMPD1-202ENST00000526280 PPP1R10Q96QC0 940 aaKnown RBP14.08□□□□□ -0.16
SMPD1-202ENST00000526280 FAM213AQ9BRX8 229 aa14.08□□□□□ -0.16
SMPD1-202ENST00000526280 TMEM175Q9BSA9 504 aa14.08□□□□□ -0.16
SMPD1-202ENST00000526280 PRDM12Q9H4Q4 367 aa14.08□□□□□ -0.16
SMPD1-202ENST00000526280 HSPBP1Q9NZL4 362 aa14.08□□□□□ -0.16
SMPD1-202ENST00000526280 LACTBL1A8MY62 500 aa14.07□□□□□ -0.16
SMPD1-202ENST00000526280 RFXAPO00287 272 aa14.07□□□□□ -0.16
SMPD1-202ENST00000526280 CLIC2O15247 247 aa14.07□□□□□ -0.16
SMPD1-202ENST00000526280 LPXNO60711 386 aa14.07□□□□□ -0.16
SMPD1-202ENST00000526280 MBD3O95983 291 aa14.07□□□□□ -0.16
SMPD1-202ENST00000526280 ALDH2P05091 517 aa14.07□□□□□ -0.16
SMPD1-202ENST00000526280 BMP6P22004 513 aa14.07□□□□□ -0.16
SMPD1-202ENST00000526280 PBX3P40426 434 aa14.07□□□□□ -0.16
SMPD1-202ENST00000526280 PRCPP42785 496 aa14.07□□□□□ -0.16
SMPD1-202ENST00000526280 SLC11A1P49279 550 aa14.07□□□□□ -0.16
SMPD1-202ENST00000526280 GPM6BQ13491 265 aa14.07□□□□□ -0.16
SMPD1-202ENST00000526280 MORC3Q14149 939 aa14.07□□□□□ -0.16
SMPD1-202ENST00000526280 GLRA4Q5JXX5 417 aa14.07□□□□□ -0.16
SMPD1-202ENST00000526280 ISM2Q6H9L7 571 aa14.07□□□□□ -0.16
SMPD1-202ENST00000526280 CD302Q8IX05 232 aa14.07□□□□□ -0.16
SMPD1-202ENST00000526280 GPD1LQ8N335 351 aa14.07□□□□□ -0.16
SMPD1-202ENST00000526280 KLHL23Q8NBE8 558 aa14.07□□□□□ -0.16
SMPD1-202ENST00000526280 TMEM174Q8WUU8 243 aa14.07□□□□□ -0.16
SMPD1-202ENST00000526280 FBXL18Q96ME1 805 aa14.07□□□□□ -0.16
SMPD1-202ENST00000526280 C11orf84Q9BUA3 381 aaPredicted RBP14.07□□□□□ -0.16
SMPD1-202ENST00000526280 NUP62CLQ9H1M0 184 aa14.07□□□□□ -0.16
SMPD1-202ENST00000526280 SPG21Q9NZD8 308 aa14.07□□□□□ -0.16
SMPD1-202ENST00000526280 TRANK1O15050 2925 aa14.06□□□□□ -0.16
SMPD1-202ENST00000526280 GOLGA8IPA6NC78 632 aa14.06□□□□□ -0.16
SMPD1-202ENST00000526280 GOLGA8JA6NMD2 632 aa14.06□□□□□ -0.16
SMPD1-202ENST00000526280 BIN1O00499 593 aa14.06□□□□□ -0.16
SMPD1-202ENST00000526280 NRP1O14786 923 aa14.06□□□□□ -0.16
SMPD1-202ENST00000526280 ITGB1P05556 798 aa14.06□□□□□ -0.16
SMPD1-202ENST00000526280 PPM1AP35813 382 aa14.06□□□□□ -0.16
SMPD1-202ENST00000526280 PLCB3Q01970 1234 aa14.06□□□□□ -0.16
SMPD1-202ENST00000526280 PPP2R3AQ06190 1150 aa14.06□□□□□ -0.16
SMPD1-202ENST00000526280 TUSC3Q13454 348 aa14.06□□□□□ -0.16
SMPD1-202ENST00000526280 ZBTB6Q15916 424 aa14.06□□□□□ -0.16
SMPD1-202ENST00000526280 SLC39A11Q8N1S5 342 aa14.06□□□□□ -0.16
SMPD1-202ENST00000526280 XXYLT1Q8NBI6 393 aa14.06□□□□□ -0.16
SMPD1-202ENST00000526280 GDPD5Q8WTR4 605 aa14.06□□□□□ -0.16
SMPD1-202ENST00000526280 GUCD1Q96NT3 240 aa14.06□□□□□ -0.16
SMPD1-202ENST00000526280 TSPAN18Q96SJ8 248 aa14.06□□□□□ -0.16
SMPD1-202ENST00000526280 CDX2Q99626 313 aaPredicted RBP14.06□□□□□ -0.16
SMPD1-202ENST00000526280 ASB7Q9H672 318 aa14.06□□□□□ -0.16
SMPD1-202ENST00000526280 KIAA1586Q9HCI6 787 aa14.06□□□□□ -0.16
SMPD1-202ENST00000526280 SLC38A7Q9NVC3 462 aa14.06□□□□□ -0.16
SMPD1-202ENST00000526280 DMAC2Q9NW81 257 aa14.06□□□□□ -0.16
SMPD1-202ENST00000526280 TRAF3IP3Q9Y228 551 aa14.06□□□□□ -0.16
SMPD1-202ENST00000526280 FAN1Q9Y2M0 1017 aa14.06□□□□□ -0.16
SMPD1-202ENST00000526280 ZNF233A6NK53 670 aa14.05□□□□□ -0.16
SMPD1-202ENST00000526280 NT5C1B-RDH14C9J2C7 533 aa14.05□□□□□ -0.16
SMPD1-202ENST00000526280 CALUO43852 315 aaPredicted RBP14.05□□□□□ -0.16
SMPD1-202ENST00000526280 FGF18O76093 207 aa14.05□□□□□ -0.16
SMPD1-202ENST00000526280 IL18RAPO95256 599 aa14.05□□□□□ -0.16
SMPD1-202ENST00000526280 OR1G1P47890 313 aa14.05□□□□□ -0.16
SMPD1-202ENST00000526280 CYP2J2P51589 502 aa14.05□□□□□ -0.16
SMPD1-202ENST00000526280 SPAG1Q07617 926 aa14.05□□□□□ -0.16
SMPD1-202ENST00000526280 MYBPC2Q14324 1141 aa14.05□□□□□ -0.16
SMPD1-202ENST00000526280 NFIL3Q16649 462 aa14.05□□□□□ -0.16
SMPD1-202ENST00000526280 ZCWPW2Q504Y3 356 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms