RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 ALG13Q9NP73 1137 aaKnown RBP18.84■□□□□ 0.61
LMX1B-203ENST00000526117 EXOC1Q9NV70 894 aa18.84■□□□□ 0.61
LMX1B-203ENST00000526117 SLC38A7Q9NVC3 462 aa18.84■□□□□ 0.61
LMX1B-203ENST00000526117 CGNQ9P2M7 1197 aaKnown RBP18.84■□□□□ 0.61
LMX1B-203ENST00000526117 PUF60Q9UHX1 559 aaKnown RBP18.84■□□□□ 0.61
LMX1B-203ENST00000526117 CPSF3Q9UKF6 684 aaKnown RBP18.84■□□□□ 0.61
LMX1B-203ENST00000526117 ATG2AQ2TAZ0 1938 aa18.83■□□□□ 0.6
LMX1B-203ENST00000526117 SMIM28A0A1B0GU29 152 aa18.83■□□□□ 0.6
LMX1B-203ENST00000526117 TTC26A0AVF1 554 aa18.83■□□□□ 0.6
LMX1B-203ENST00000526117 NRP1O14786 923 aa18.83■□□□□ 0.6
LMX1B-203ENST00000526117 FSCN2O14926 492 aa18.83■□□□□ 0.6
LMX1B-203ENST00000526117 RPN1P04843 607 aaKnown RBP18.83■□□□□ 0.6
LMX1B-203ENST00000526117 HOXD13P35453 343 aa18.83■□□□□ 0.6
LMX1B-203ENST00000526117 UBE2HP62256 183 aa18.83■□□□□ 0.6
LMX1B-203ENST00000526117 SLC10A6Q3KNW5 377 aa18.83■□□□□ 0.6
LMX1B-203ENST00000526117 DDX53Q86TM3 631 aaKnown RBP18.83■□□□□ 0.6
LMX1B-203ENST00000526117 CD302Q8IX05 232 aa18.83■□□□□ 0.6
LMX1B-203ENST00000526117 TMEM174Q8WUU8 243 aa18.83■□□□□ 0.6
LMX1B-203ENST00000526117 SCFD1Q8WVM8 642 aa18.83■□□□□ 0.6
LMX1B-203ENST00000526117 HPS3Q969F9 1004 aa18.83■□□□□ 0.6
LMX1B-203ENST00000526117 TMEM169Q96HH4 297 aa18.83■□□□□ 0.6
LMX1B-203ENST00000526117 UROC1Q96N76 676 aa18.83■□□□□ 0.6
LMX1B-203ENST00000526117 NSUN3Q9H649 340 aaKnown RBP18.83■□□□□ 0.6
LMX1B-203ENST00000526117 TLR9Q9NR96 1032 aa18.83■□□□□ 0.6
LMX1B-203ENST00000526117 FAN1Q9Y2M0 1017 aa18.83■□□□□ 0.6
LMX1B-203ENST00000526117 TMEM189-UBE2V1I3L0A0 370 aa18.82■□□□□ 0.6
LMX1B-203ENST00000526117 MEFVO15553 781 aaPredicted RBP18.82■□□□□ 0.6
LMX1B-203ENST00000526117 PRPF6O94906 941 aaKnown RBP18.82■□□□□ 0.6
LMX1B-203ENST00000526117 LDHAP00338 332 aaKnown RBP18.82■□□□□ 0.6
LMX1B-203ENST00000526117 DNAJB1P25685 340 aa18.82■□□□□ 0.6
LMX1B-203ENST00000526117 PBX3P40426 434 aa18.82■□□□□ 0.6
LMX1B-203ENST00000526117 MATR3P43243 847 aaKnown RBP eCLIP18.82■□□□□ 0.6
LMX1B-203ENST00000526117 COL19A1Q14993 1142 aa18.82■□□□□ 0.6
LMX1B-203ENST00000526117 KMT5BQ4FZB7 885 aa18.82■□□□□ 0.6
LMX1B-203ENST00000526117 GPR65Q8IYL9 337 aa18.82■□□□□ 0.6
LMX1B-203ENST00000526117 RNF168Q8IYW5 571 aaPredicted RBP18.82■□□□□ 0.6
LMX1B-203ENST00000526117 SYCP3Q8IZU3 236 aa18.82■□□□□ 0.6
LMX1B-203ENST00000526117 GLIS3Q8NEA6 775 aa18.82■□□□□ 0.6
LMX1B-203ENST00000526117 SPATA20Q8TB22 786 aa18.82■□□□□ 0.6
LMX1B-203ENST00000526117 CCDC47Q96A33 483 aaKnown RBP18.82■□□□□ 0.6
LMX1B-203ENST00000526117 GBP3Q9H0R5 595 aa18.82■□□□□ 0.6
LMX1B-203ENST00000526117 NGRNQ9NPE2 291 aaKnown RBP18.82■□□□□ 0.6
LMX1B-203ENST00000526117 MARCH5Q9NX47 278 aa18.82■□□□□ 0.6
LMX1B-203ENST00000526117 HOOK1Q9UJC3 728 aaKnown RBP18.82■□□□□ 0.6
LMX1B-203ENST00000526117 AGO2Q9UKV8 859 aaKnown RBP18.82■□□□□ 0.6
LMX1B-203ENST00000526117 CITO14578 2027 aa18.82■□□□□ 0.6
LMX1B-203ENST00000526117 PRUNE2Q8WUY3 3088 aa18.82■□□□□ 0.6
LMX1B-203ENST00000526117 PDCD11Q14690 1871 aaKnown RBP18.82■□□□□ 0.6
LMX1B-203ENST00000526117 FSD2A1L4K1 749 aa18.81■□□□□ 0.6
LMX1B-203ENST00000526117 PRR29P0C7W0 189 aa18.81■□□□□ 0.6
LMX1B-203ENST00000526117 HARSP12081 509 aaKnown RBP18.81■□□□□ 0.6
LMX1B-203ENST00000526117 OSTNP61366 133 aa18.81■□□□□ 0.6
LMX1B-203ENST00000526117 ENOX2Q16206 610 aaKnown RBP18.81■□□□□ 0.6
LMX1B-203ENST00000526117 TMEM173Q86WV6 379 aaPredicted RBP18.81■□□□□ 0.6
LMX1B-203ENST00000526117 C12orf56Q8IXR9 622 aa18.81■□□□□ 0.6
LMX1B-203ENST00000526117 KIAA0895Q8NCT3 520 aa18.81■□□□□ 0.6
LMX1B-203ENST00000526117 POMGNT1Q8WZA1 660 aa18.81■□□□□ 0.6
LMX1B-203ENST00000526117 COLEC11Q9BWP8 271 aa18.81■□□□□ 0.6
LMX1B-203ENST00000526117 GTPBP4Q9BZE4 634 aaKnown RBP18.81■□□□□ 0.6
LMX1B-203ENST00000526117 CXCL16Q9H2A7 254 aa18.81■□□□□ 0.6
LMX1B-203ENST00000526117 DERAQ9Y315 318 aa18.81■□□□□ 0.6
LMX1B-203ENST00000526117 IRAK3Q9Y616 596 aa18.81■□□□□ 0.6
LMX1B-203ENST00000526117 TISP43B9A030 160 aa18.8■□□□□ 0.6
LMX1B-203ENST00000526117 TGFB1I1O43294 461 aa18.8■□□□□ 0.6
LMX1B-203ENST00000526117 NCK2O43639 380 aa18.8■□□□□ 0.6
LMX1B-203ENST00000526117 CXCL8P10145 99 aa18.8■□□□□ 0.6
LMX1B-203ENST00000526117 CYP3A5P20815 502 aa18.8■□□□□ 0.6
LMX1B-203ENST00000526117 TNFSF9P41273 254 aa18.8■□□□□ 0.6
LMX1B-203ENST00000526117 OR1G1P47890 313 aa18.8■□□□□ 0.6
LMX1B-203ENST00000526117 PPP2R3AQ06190 1150 aa18.8■□□□□ 0.6
LMX1B-203ENST00000526117 STK4Q13043 487 aa18.8■□□□□ 0.6
LMX1B-203ENST00000526117 HSP90AA2PQ14568 343 aaPredicted RBP18.8■□□□□ 0.6
LMX1B-203ENST00000526117 ZBTB6Q15916 424 aa18.8■□□□□ 0.6
LMX1B-203ENST00000526117 KNOP1Q1ED39 458 aaKnown RBP18.8■□□□□ 0.6
LMX1B-203ENST00000526117 GOLGA5Q8TBA6 731 aa18.8■□□□□ 0.6
LMX1B-203ENST00000526117 BCL7CQ8WUZ0 217 aaPredicted RBP18.8■□□□□ 0.6
LMX1B-203ENST00000526117 PPP2R3CQ969Q6 453 aa18.8■□□□□ 0.6
LMX1B-203ENST00000526117 ZMAT2Q96NC0 199 aaKnown RBP18.8■□□□□ 0.6
LMX1B-203ENST00000526117 GSDMAQ96QA5 445 aa18.8■□□□□ 0.6
LMX1B-203ENST00000526117 ZBP1Q9H171 429 aa18.8■□□□□ 0.6
LMX1B-203ENST00000526117 ASB7Q9H672 318 aa18.8■□□□□ 0.6
LMX1B-203ENST00000526117 RPF1Q9H9Y2 349 aaKnown RBP18.8■□□□□ 0.6
LMX1B-203ENST00000526117 SLC39A2Q9NP94 309 aa18.8■□□□□ 0.6
LMX1B-203ENST00000526117 MYO9BQ13459 2157 aa18.79■□□□□ 0.6
LMX1B-203ENST00000526117 NT5C1B-RDH14C9J2C7 533 aa18.79■□□□□ 0.6
LMX1B-203ENST00000526117 GADD45BO75293 160 aaPredicted RBP18.79■□□□□ 0.6
LMX1B-203ENST00000526117 KIF20AO95235 890 aa18.79■□□□□ 0.6
LMX1B-203ENST00000526117 ZBTB41Q5SVQ8 909 aa18.79■□□□□ 0.6
LMX1B-203ENST00000526117 CRELD2Q6UXH1 353 aaPredicted RBP18.79■□□□□ 0.6
LMX1B-203ENST00000526117 DDX27Q96GQ7 796 aaKnown RBP18.79■□□□□ 0.6
LMX1B-203ENST00000526117 FBXL18Q96ME1 805 aa18.79■□□□□ 0.6
LMX1B-203ENST00000526117 CDCA3Q99618 268 aaPredicted RBP18.79■□□□□ 0.6
LMX1B-203ENST00000526117 IKZF4Q9H2S9 585 aa18.79■□□□□ 0.6
LMX1B-203ENST00000526117 KIAA1586Q9HCI6 787 aa18.79■□□□□ 0.6
LMX1B-203ENST00000526117 RMND1Q9NWS8 449 aa18.79■□□□□ 0.6
LMX1B-203ENST00000526117 ADAM28Q9UKQ2 775 aa18.79■□□□□ 0.6
LMX1B-203ENST00000526117 PRRC2BQ5JSZ5 2229 aaKnown RBP18.78■□□□□ 0.6
LMX1B-203ENST00000526117 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.78■□□□□ 0.6
LMX1B-203ENST00000526117 XPOTO43592 962 aaKnown RBP18.78■□□□□ 0.6
LMX1B-203ENST00000526117 EXTL3O43909 919 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms