RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 BRCC3P46736 316 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 CLCNKBP51801 687 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 YARSP54577 528 aaKnown RBP5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 ERVK-21P61565 698 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 DLG4P78352 724 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 PSMD2Q13200 908 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 GPM6BQ13491 265 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 MORC3Q14149 939 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 ADGRE1Q14246 886 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 KCNB1Q14721 858 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 PCBP1Q15365 356 aaKnown RBP eCLIP5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 DPCR1Q3MIW9 517 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 DCAF4L1Q3SXM0 396 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 HSP90AA4PQ58FG1 418 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 ZNF658Q5TYW1 1059 aaPredicted RBP5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 ANKRD40Q6AI12 368 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 SLFN12LQ6IEE8 588 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 KCNT2Q6UVM3 1135 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 STXBP4Q6ZWJ1 553 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 TAS1R1Q7RTX1 841 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 RBM23Q86U06 439 aaKnown RBP5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 CREBRFQ8IUR6 639 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 GLYCTKQ8IVS8 523 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 EFCAB13Q8IY85 973 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 CMTR2Q8IYT2 770 aaKnown RBP5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 HACE1Q8IYU2 909 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 LRRC43Q8N309 656 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 C3orf58Q8NDZ4 430 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 FBXO22Q8NEZ5 403 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 SPATA20Q8TB22 786 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 PLEKHO2Q8TD55 490 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 SP7Q8TDD2 431 aaPredicted RBP5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 MICAL1Q8TDZ2 1067 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 CCDC127Q96BQ5 260 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 HVCN1Q96D96 273 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 CCDC51Q96ER9 411 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 KIF12Q96FN5 646 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 ZNF558Q96NG5 402 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 GUCD1Q96NT3 240 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 FAM193BQ96PV7 902 aaPredicted RBP5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 GSDMAQ96QA5 445 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 CDX2Q99626 313 aaPredicted RBP5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 TRAIPQ9BWF2 469 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 GZF1Q9H116 711 aaPredicted RBP5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 KCTD10Q9H3F6 313 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 TMEM206Q9H813 350 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 PDE11AQ9HCR9 933 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 RBAKQ9NYW8 714 aaPredicted RBP5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 HSPBP1Q9NZL4 362 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 KIAA1468Q9P260 1216 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 HOOK1Q9UJC3 728 aaKnown RBP5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 CPSF3Q9UKF6 684 aaKnown RBP5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 GIT1Q9Y2X7 761 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 PTPRSQ13332 1948 aa5.01□□□□□ -1.61
CHMP4A-202ENST00000524955 TTC26A0AVF1 554 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 PPP1R3GB7ZBB8 358 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 PER2O15055 1255 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 HOXA2O43364 376 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 EXTL3O43909 919 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 LRRN2O75325 713 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 AKAP3O75969 853 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 KIF4AO95239 1232 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 NR3C1P04150 777 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 ALDH2P05091 517 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 MYL1P05976 194 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 GALTP07902 379 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 CLTAP09496 248 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 TRIM49P0CI25 452 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 TRIM49CP0CI26 452 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 DLATP10515 647 aaKnown RBP5□□□□□ -1.61
CHMP4A-202ENST00000524955 RPL17P18621 184 aaKnown RBP5□□□□□ -1.61
CHMP4A-202ENST00000524955 GARTP22102 1010 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 NR2F2P24468 414 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 GTF2F1P35269 517 aaKnown RBP eCLIP5□□□□□ -1.61
CHMP4A-202ENST00000524955 ALDH7A1P49419 539 aaKnown RBP5□□□□□ -1.61
CHMP4A-202ENST00000524955 ERVFC1P60507 584 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 RBM10P98175 930 aaKnown RBP5□□□□□ -1.61
CHMP4A-202ENST00000524955 TFAMQ00059 246 aaKnown RBP5□□□□□ -1.61
CHMP4A-202ENST00000524955 PPP2R3AQ06190 1150 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 GRIK3Q13003 919 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 ALCAMQ13740 583 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 NFKBIBQ15653 356 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 NAB2Q15742 525 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 BMT2Q1RMZ1 405 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 PLPP4Q5VZY2 271 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 ALKAL1Q6UXT8 129 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 EP400NLQ6ZTU2 488 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 C11orf57Q6ZUT1 292 aaPredicted RBP5□□□□□ -1.61
CHMP4A-202ENST00000524955 HS2ST1Q7LGA3 356 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 APBB1IPQ7Z5R6 666 aaPredicted RBP5□□□□□ -1.61
CHMP4A-202ENST00000524955 ADGRD2Q7Z7M1 963 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 CEP57Q86XR8 500 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 COLGALT2Q8IYK4 626 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 ADSSL1Q8N142 457 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 GPD1LQ8N335 351 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 GUF1Q8N442 669 aaKnown RBP5□□□□□ -1.61
CHMP4A-202ENST00000524955 XXYLT1Q8NBI6 393 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 SLC17A8Q8NDX2 589 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 OR5B17Q8NGF7 314 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 POF1BQ8WVV4 589 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms