RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 PNNQ9H307 717 aaKnown RBP8.41□□□□□ -1.06
NEDD8-203ENST00000524927 ABHD16BQ9H3Z7 469 aa8.41□□□□□ -1.06
NEDD8-203ENST00000524927 MYH16Q9H6N6 1097 aa8.41□□□□□ -1.06
NEDD8-203ENST00000524927 RPAP3Q9H6T3 665 aaPredicted RBP8.41□□□□□ -1.06
NEDD8-203ENST00000524927 USP18Q9UMW8 372 aa8.41□□□□□ -1.06
NEDD8-203ENST00000524927 TENM4Q6N022 2769 aa8.4□□□□□ -1.06
NEDD8-203ENST00000524927 C5orf67F2Z3F1 127 aa8.4□□□□□ -1.06
NEDD8-203ENST00000524927 PARNO95453 639 aaKnown RBP8.4□□□□□ -1.06
NEDD8-203ENST00000524927 PRNPP04156 253 aa8.4□□□□□ -1.06
NEDD8-203ENST00000524927 RB1P06400 928 aa8.4□□□□□ -1.06
NEDD8-203ENST00000524927 BTDP43251 543 aa8.4□□□□□ -1.06
NEDD8-203ENST00000524927 RIPK4P57078 832 aa8.4□□□□□ -1.06
NEDD8-203ENST00000524927 RHBDL3P58872 404 aa8.4□□□□□ -1.06
NEDD8-203ENST00000524927 PPP2R2AP63151 447 aa8.4□□□□□ -1.06
NEDD8-203ENST00000524927 PLS1Q14651 629 aa8.4□□□□□ -1.06
NEDD8-203ENST00000524927 FSCN1Q16658 493 aaKnown RBP8.4□□□□□ -1.06
NEDD8-203ENST00000524927 CLEC16AQ2KHT3 1053 aa8.4□□□□□ -1.06
NEDD8-203ENST00000524927 ZC3H12BQ5HYM0 836 aaKnown RBP8.4□□□□□ -1.06
NEDD8-203ENST00000524927 LMBR1LQ6UX01 489 aa8.4□□□□□ -1.06
NEDD8-203ENST00000524927 TMC3Q7Z5M5 1100 aa8.4□□□□□ -1.06
NEDD8-203ENST00000524927 ZNF227Q86WZ6 799 aa8.4□□□□□ -1.06
NEDD8-203ENST00000524927 RCC1LQ96I51 464 aaKnown RBP8.4□□□□□ -1.06
NEDD8-203ENST00000524927 Q96M66 194 aa8.4□□□□□ -1.06
NEDD8-203ENST00000524927 AARSD1Q9BTE6 412 aaKnown RBP8.4□□□□□ -1.06
NEDD8-203ENST00000524927 OSBPL1AQ9BXW6 950 aa8.4□□□□□ -1.06
NEDD8-203ENST00000524927 FHOD1Q9Y613 1164 aa8.4□□□□□ -1.06
NEDD8-203ENST00000524927 EIF4E1BA6NMX2 242 aaKnown RBP8.39□□□□□ -1.07
NEDD8-203ENST00000524927 MEIS1O00470 390 aa8.39□□□□□ -1.07
NEDD8-203ENST00000524927 PDE8BO95263 885 aa8.39□□□□□ -1.07
NEDD8-203ENST00000524927 ASMTLO95671 621 aa8.39□□□□□ -1.07
NEDD8-203ENST00000524927 PSMC6P62333 389 aa8.39□□□□□ -1.07
NEDD8-203ENST00000524927 NMIQ13287 307 aaPredicted RBP8.39□□□□□ -1.07
NEDD8-203ENST00000524927 TCEA2Q15560 299 aa8.39□□□□□ -1.07
NEDD8-203ENST00000524927 FOXP4Q8IVH2 680 aaPredicted RBP8.39□□□□□ -1.07
NEDD8-203ENST00000524927 MFSD4AQ8N468 514 aa8.39□□□□□ -1.07
NEDD8-203ENST00000524927 ARHGEF39Q8N4T4 335 aa8.39□□□□□ -1.07
NEDD8-203ENST00000524927 FIBCD1Q8N539 461 aa8.39□□□□□ -1.07
NEDD8-203ENST00000524927 MAGEB6Q8N7X4 407 aa8.39□□□□□ -1.07
NEDD8-203ENST00000524927 ZNF513Q8N8E2 541 aaPredicted RBP8.39□□□□□ -1.07
NEDD8-203ENST00000524927 SYTL5Q8TDW5 730 aaPredicted RBP8.39□□□□□ -1.07
NEDD8-203ENST00000524927 RIN2Q8WYP3 895 aaPredicted RBP8.39□□□□□ -1.07
NEDD8-203ENST00000524927 C11orf84Q9BUA3 381 aaPredicted RBP8.39□□□□□ -1.07
NEDD8-203ENST00000524927 CHMP4AQ9BY43 222 aa8.39□□□□□ -1.07
NEDD8-203ENST00000524927 DHX36Q9H2U1 1008 aaKnown RBP8.39□□□□□ -1.07
NEDD8-203ENST00000524927 ARHGEF4Q9NR80 690 aa8.39□□□□□ -1.07
NEDD8-203ENST00000524927 CHST7Q9NS84 486 aa8.39□□□□□ -1.07
NEDD8-203ENST00000524927 CGGBP1Q9UFW8 167 aaPredicted RBP8.39□□□□□ -1.07
NEDD8-203ENST00000524927 EMC9Q9Y3B6 208 aa8.39□□□□□ -1.07
NEDD8-203ENST00000524927 NR2E1Q9Y466 385 aa8.39□□□□□ -1.07
NEDD8-203ENST00000524927 ATG2AQ2TAZ0 1938 aa8.39□□□□□ -1.07
NEDD8-203ENST00000524927 MYH2Q9UKX2 1941 aa8.39□□□□□ -1.07
NEDD8-203ENST00000524927 GPR75-ASB3A0A0A6YYF3 556 aa8.38□□□□□ -1.07
NEDD8-203ENST00000524927 GRM6O15303 877 aa8.38□□□□□ -1.07
NEDD8-203ENST00000524927 KRT38O76015 456 aa8.38□□□□□ -1.07
NEDD8-203ENST00000524927 KCNH1O95259 989 aa8.38□□□□□ -1.07
NEDD8-203ENST00000524927 CXCL10P02778 98 aa8.38□□□□□ -1.07
NEDD8-203ENST00000524927 C8AP07357 584 aa8.38□□□□□ -1.07
NEDD8-203ENST00000524927 L1CAMP32004 1257 aa8.38□□□□□ -1.07
NEDD8-203ENST00000524927 TNK2Q07912 1038 aa8.38□□□□□ -1.07
NEDD8-203ENST00000524927 GPNMBQ14956 572 aa8.38□□□□□ -1.07
NEDD8-203ENST00000524927 SHROOM1Q2M3G4 852 aaPredicted RBP8.38□□□□□ -1.07
NEDD8-203ENST00000524927 LCE4AQ5TA78 99 aa8.38□□□□□ -1.07
NEDD8-203ENST00000524927 AFAP1L1Q8TED9 768 aa8.38□□□□□ -1.07
NEDD8-203ENST00000524927 PUS3Q9BZE2 481 aaKnown RBP8.38□□□□□ -1.07
NEDD8-203ENST00000524927 PRR13Q9NZ81 148 aa8.38□□□□□ -1.07
NEDD8-203ENST00000524927 SF3B6Q9Y3B4 125 aaKnown RBP8.38□□□□□ -1.07
NEDD8-203ENST00000524927 CAPN6Q9Y6Q1 641 aa8.38□□□□□ -1.07
NEDD8-203ENST00000524927 DMXL2Q8TDJ6 3036 aa8.38□□□□□ -1.07
NEDD8-203ENST00000524927 MYO10Q9HD67 2058 aa8.38□□□□□ -1.07
NEDD8-203ENST00000524927 ASTN1O14525 1302 aa8.37□□□□□ -1.07
NEDD8-203ENST00000524927 CCDC163A0A0D9SF12 145 aa8.37□□□□□ -1.07
NEDD8-203ENST00000524927 PRODHO43272 600 aa8.37□□□□□ -1.07
NEDD8-203ENST00000524927 SIGLEC6O43699 453 aa8.37□□□□□ -1.07
NEDD8-203ENST00000524927 PRAMEF1O95521 474 aa8.37□□□□□ -1.07
NEDD8-203ENST00000524927 MMP1P03956 469 aa8.37□□□□□ -1.07
NEDD8-203ENST00000524927 AMHP03971 560 aa8.37□□□□□ -1.07
NEDD8-203ENST00000524927 IFIT1P09914 478 aaKnown RBP8.37□□□□□ -1.07
NEDD8-203ENST00000524927 ARP10275 920 aa8.37□□□□□ -1.07
NEDD8-203ENST00000524927 COPB2P35606 906 aa8.37□□□□□ -1.07
NEDD8-203ENST00000524927 RNF187Q5TA31 235 aaPredicted RBP8.37□□□□□ -1.07
NEDD8-203ENST00000524927 YOD1Q5VVQ6 348 aaPredicted RBP8.37□□□□□ -1.07
NEDD8-203ENST00000524927 FOXB2Q5VYV0 432 aa8.37□□□□□ -1.07
NEDD8-203ENST00000524927 RIOX2Q8IUF8 465 aa8.37□□□□□ -1.07
NEDD8-203ENST00000524927 TRIM59Q8IWR1 403 aa8.37□□□□□ -1.07
NEDD8-203ENST00000524927 VGLL2Q8N8G2 317 aa8.37□□□□□ -1.07
NEDD8-203ENST00000524927 PIWIL2Q8TC59 973 aaKnown RBP8.37□□□□□ -1.07
NEDD8-203ENST00000524927 BTN2A2Q8WVV5 523 aa8.37□□□□□ -1.07
NEDD8-203ENST00000524927 MRGPRX3Q96LB0 322 aa8.37□□□□□ -1.07
NEDD8-203ENST00000524927 DHRS4Q9BTZ2 278 aa8.37□□□□□ -1.07
NEDD8-203ENST00000524927 AP5M1Q9H0R1 490 aa8.37□□□□□ -1.07
NEDD8-203ENST00000524927 SMOC2Q9H3U7 446 aa8.37□□□□□ -1.07
NEDD8-203ENST00000524927 DNAJC18Q9H819 358 aa8.37□□□□□ -1.07
NEDD8-203ENST00000524927 LRRC4CQ9HCJ2 640 aa8.37□□□□□ -1.07
NEDD8-203ENST00000524927 PARD6AQ9NPB6 346 aa8.37□□□□□ -1.07
NEDD8-203ENST00000524927 BARX2Q9UMQ3 279 aaPredicted RBP8.37□□□□□ -1.07
NEDD8-203ENST00000524927 MYH13Q9UKX3 1938 aa8.37□□□□□ -1.07
NEDD8-203ENST00000524927 MROH7-TTC4A0A0A0MT08 1334 aa8.36□□□□□ -1.07
NEDD8-203ENST00000524927 MYO9AB2RTY4 2548 aa8.36□□□□□ -1.07
NEDD8-203ENST00000524927 TRBV23-1A0A0A0MS06 115 aa8.36□□□□□ -1.07
NEDD8-203ENST00000524927 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms