RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 TEX2Q8IWB9 1127 aa12.63□□□□□ -0.39
PTPRK-216ENST00000524481 ATP8B4Q8TF62 1192 aa12.63□□□□□ -0.39
PTPRK-216ENST00000524481 LMBR1Q8WVP7 490 aa12.63□□□□□ -0.39
PTPRK-216ENST00000524481 NTPCRQ9BSD7 190 aaKnown RBP12.63□□□□□ -0.39
PTPRK-216ENST00000524481 SELENOOQ9BVL4 669 aa12.63□□□□□ -0.39
PTPRK-216ENST00000524481 TIPINQ9BVW5 301 aa12.63□□□□□ -0.39
PTPRK-216ENST00000524481 MRPL4Q9BYD3 311 aaKnown RBP12.63□□□□□ -0.39
PTPRK-216ENST00000524481 GPR88Q9GZN0 384 aa12.63□□□□□ -0.39
PTPRK-216ENST00000524481 ERAP1Q9NZ08 941 aa12.63□□□□□ -0.39
PTPRK-216ENST00000524481 KCNH4Q9UQ05 1017 aa12.63□□□□□ -0.39
PTPRK-216ENST00000524481 HES2Q9Y543 173 aa12.63□□□□□ -0.39
PTPRK-216ENST00000524481 KIAA1217Q5T5P2 1943 aa12.63□□□□□ -0.39
PTPRK-216ENST00000524481 ANO9A1A5B4 782 aa12.63□□□□□ -0.39
PTPRK-216ENST00000524481 ASB14A6NK59 587 aa12.63□□□□□ -0.39
PTPRK-216ENST00000524481 CXCL8P10145 99 aa12.63□□□□□ -0.39
PTPRK-216ENST00000524481 FAM47CQ5HY64 1035 aa12.63□□□□□ -0.39
PTPRK-216ENST00000524481 FOXR2Q6PJQ5 311 aa12.63□□□□□ -0.39
PTPRK-216ENST00000524481 OR6J1Q8NGC5 347 aa12.63□□□□□ -0.39
PTPRK-216ENST00000524481 BBXQ8WY36 941 aaPredicted RBP12.63□□□□□ -0.39
PTPRK-216ENST00000524481 CYFIP2Q96F07 1278 aa12.63□□□□□ -0.39
PTPRK-216ENST00000524481 AMACRQ9UHK6 382 aa12.63□□□□□ -0.39
PTPRK-216ENST00000524481 NFU1Q9UMS0 254 aa12.63□□□□□ -0.39
PTPRK-216ENST00000524481 LAMA2P24043 3122 aaKnown RBP12.63□□□□□ -0.39
PTPRK-216ENST00000524481 MKI67P46013 3256 aaKnown RBP12.63□□□□□ -0.39
PTPRK-216ENST00000524481 HEXIM1O94992 359 aaKnown RBP12.63□□□□□ -0.39
PTPRK-216ENST00000524481 KIF4AO95239 1232 aa12.63□□□□□ -0.39
PTPRK-216ENST00000524481 TBC1D8O95759 1140 aa12.63□□□□□ -0.39
PTPRK-216ENST00000524481 OAS2P29728 719 aaKnown RBP12.63□□□□□ -0.39
PTPRK-216ENST00000524481 ICAM3P32942 547 aa12.63□□□□□ -0.39
PTPRK-216ENST00000524481 RAP1GAPP47736 663 aa12.63□□□□□ -0.39
PTPRK-216ENST00000524481 WDR72Q3MJ13 1102 aa12.63□□□□□ -0.39
PTPRK-216ENST00000524481 GLRA4Q5JXX5 417 aa12.63□□□□□ -0.39
PTPRK-216ENST00000524481 VTI1AQ96AJ9 217 aa12.63□□□□□ -0.39
PTPRK-216ENST00000524481 FGD4Q96M96 766 aa12.63□□□□□ -0.39
PTPRK-216ENST00000524481 CELF4Q9BZC1 486 aaKnown RBP12.63□□□□□ -0.39
PTPRK-216ENST00000524481 C17orf75Q9HAS0 396 aa12.63□□□□□ -0.39
PTPRK-216ENST00000524481 VPS18Q9P253 973 aa12.63□□□□□ -0.39
PTPRK-216ENST00000524481 CNOT8Q9UFF9 292 aaKnown RBP12.63□□□□□ -0.39
PTPRK-216ENST00000524481 PTPN22Q9Y2R2 807 aa12.63□□□□□ -0.39
PTPRK-216ENST00000524481 PSME4Q14997 1843 aa12.62□□□□□ -0.39
PTPRK-216ENST00000524481 ERLIN2O94905 339 aa12.62□□□□□ -0.39
PTPRK-216ENST00000524481 LGALS2P05162 132 aa12.62□□□□□ -0.39
PTPRK-216ENST00000524481 MARCKSL1P49006 195 aa12.62□□□□□ -0.39
PTPRK-216ENST00000524481 CCL14Q16627 93 aa12.62□□□□□ -0.39
PTPRK-216ENST00000524481 CCDC50Q8IVM0 306 aa12.62□□□□□ -0.39
PTPRK-216ENST00000524481 SLC17A8Q8NDX2 589 aa12.62□□□□□ -0.39
PTPRK-216ENST00000524481 EPS8L1Q8TE68 723 aa12.62□□□□□ -0.39
PTPRK-216ENST00000524481 NUP85Q9BW27 656 aa12.62□□□□□ -0.39
PTPRK-216ENST00000524481 ALG6Q9Y672 507 aa12.62□□□□□ -0.39
PTPRK-216ENST00000524481 CCDC151A5D8V7 595 aa12.62□□□□□ -0.39
PTPRK-216ENST00000524481 MAFO75444 373 aaPredicted RBP12.62□□□□□ -0.39
PTPRK-216ENST00000524481 ARL2P36404 184 aa12.62□□□□□ -0.39
PTPRK-216ENST00000524481 VPS41P49754 854 aa12.62□□□□□ -0.39
PTPRK-216ENST00000524481 SNX1Q13596 522 aa12.62□□□□□ -0.39
PTPRK-216ENST00000524481 MOGSQ13724 837 aa12.62□□□□□ -0.39
PTPRK-216ENST00000524481 TUBB2AQ13885 445 aa12.62□□□□□ -0.39
PTPRK-216ENST00000524481 CASP8Q14790 479 aa12.62□□□□□ -0.39
PTPRK-216ENST00000524481 ODF2Q5BJF6 829 aa12.62□□□□□ -0.39
PTPRK-216ENST00000524481 LDLRAD1Q5T700 205 aa12.62□□□□□ -0.39
PTPRK-216ENST00000524481 ATF7IP2Q5U623 682 aa12.62□□□□□ -0.39
PTPRK-216ENST00000524481 SLFN12LQ6IEE8 588 aa12.62□□□□□ -0.39
PTPRK-216ENST00000524481 TUBB2BQ9BVA1 445 aa12.62□□□□□ -0.39
PTPRK-216ENST00000524481 KLHL11Q9NVR0 708 aa12.62□□□□□ -0.39
PTPRK-216ENST00000524481 COG5Q9UP83 839 aa12.62□□□□□ -0.39
PTPRK-216ENST00000524481 H0YCG3 227 aa12.61□□□□□ -0.39
PTPRK-216ENST00000524481 GOLGA8SH3BPF8 625 aa12.61□□□□□ -0.39
PTPRK-216ENST00000524481 PJA2O43164 708 aa12.61□□□□□ -0.39
PTPRK-216ENST00000524481 LCA5LO95447 670 aa12.61□□□□□ -0.39
PTPRK-216ENST00000524481 NOP14P78316 857 aaKnown RBP12.61□□□□□ -0.39
PTPRK-216ENST00000524481 FAM182AQ5T1J6 154 aa12.61□□□□□ -0.39
PTPRK-216ENST00000524481 IER5Q5VY09 327 aa12.61□□□□□ -0.39
PTPRK-216ENST00000524481 HEMGNQ9BXL5 484 aa12.61□□□□□ -0.39
PTPRK-216ENST00000524481 PDLIM7Q9NR12 457 aa12.61□□□□□ -0.39
PTPRK-216ENST00000524481 ANAPC7Q9UJX3 599 aa12.61□□□□□ -0.39
PTPRK-216ENST00000524481 NUB1Q9Y5A7 615 aa12.61□□□□□ -0.39
PTPRK-216ENST00000524481 PHIPQ8WWQ0 1821 aa12.61□□□□□ -0.39
PTPRK-216ENST00000524481 GH1P01241 217 aa12.61□□□□□ -0.39
PTPRK-216ENST00000524481 PRKCIP41743 596 aa12.61□□□□□ -0.39
PTPRK-216ENST00000524481 PLA2G4AP47712 749 aa12.61□□□□□ -0.39
PTPRK-216ENST00000524481 CARSP49589 748 aaKnown RBP12.61□□□□□ -0.39
PTPRK-216ENST00000524481 GPC5P78333 572 aa12.61□□□□□ -0.39
PTPRK-216ENST00000524481 PPFIA1Q13136 1202 aa12.61□□□□□ -0.39
PTPRK-216ENST00000524481 MEI1Q5TIA1 1274 aa12.61□□□□□ -0.39
PTPRK-216ENST00000524481 HDXQ7Z353 690 aa12.61□□□□□ -0.39
PTPRK-216ENST00000524481 GOLGA6L1Q8N7Z2 621 aa12.61□□□□□ -0.39
PTPRK-216ENST00000524481 HELQQ8TDG4 1101 aa12.61□□□□□ -0.39
PTPRK-216ENST00000524481 KRT35Q92764 455 aa12.61□□□□□ -0.39
PTPRK-216ENST00000524481 L3MBTL3Q96JM7 780 aaPredicted RBP12.61□□□□□ -0.39
PTPRK-216ENST00000524481 MS4A4AQ96JQ5 239 aa12.61□□□□□ -0.39
PTPRK-216ENST00000524481 TOM1L1O75674 476 aa12.61□□□□□ -0.39
PTPRK-216ENST00000524481 GLI1P08151 1106 aa12.61□□□□□ -0.39
PTPRK-216ENST00000524481 MYL3P08590 195 aa12.61□□□□□ -0.39
PTPRK-216ENST00000524481 IQCF3P0C7M6 154 aa12.61□□□□□ -0.39
PTPRK-216ENST00000524481 GARTP22102 1010 aa12.61□□□□□ -0.39
PTPRK-216ENST00000524481 NSFP46459 744 aaKnown RBP12.61□□□□□ -0.39
PTPRK-216ENST00000524481 ZNF200P98182 395 aaPredicted RBP12.61□□□□□ -0.39
PTPRK-216ENST00000524481 CRELD2Q6UXH1 353 aaPredicted RBP12.61□□□□□ -0.39
PTPRK-216ENST00000524481 TAB3Q8N5C8 712 aaPredicted RBP12.61□□□□□ -0.39
PTPRK-216ENST00000524481 UHMK1Q8TAS1 419 aaKnown RBP12.61□□□□□ -0.39
PTPRK-216ENST00000524481 NPLOC4Q8TAT6 608 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms