RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 DPYDQ12882 1025 aa16.49■□□□□ 0.23
SF3B2-202ENST00000524475 TUSC3Q13454 348 aa16.49■□□□□ 0.23
SF3B2-202ENST00000524475 KCNB1Q14721 858 aa16.49■□□□□ 0.23
SF3B2-202ENST00000524475 MAFAQ8NHW3 353 aaPredicted RBP16.49■□□□□ 0.23
SF3B2-202ENST00000524475 POF1BQ8WVV4 589 aa16.49■□□□□ 0.23
SF3B2-202ENST00000524475 TMEM169Q96HH4 297 aa16.49■□□□□ 0.23
SF3B2-202ENST00000524475 MSTO1Q9BUK6 570 aa16.49■□□□□ 0.23
SF3B2-202ENST00000524475 ALG13Q9NP73 1137 aaKnown RBP16.49■□□□□ 0.23
SF3B2-202ENST00000524475 PUF60Q9UHX1 559 aaKnown RBP16.49■□□□□ 0.23
SF3B2-202ENST00000524475 TTC26A0AVF1 554 aa16.48■□□□□ 0.23
SF3B2-202ENST00000524475 FSCN2O14926 492 aa16.48■□□□□ 0.23
SF3B2-202ENST00000524475 PRPF6O94906 941 aaKnown RBP16.48■□□□□ 0.23
SF3B2-202ENST00000524475 RHOBTB3O94955 611 aa16.48■□□□□ 0.23
SF3B2-202ENST00000524475 EFEMP2O95967 443 aa16.48■□□□□ 0.23
SF3B2-202ENST00000524475 HARSP12081 509 aaKnown RBP16.48■□□□□ 0.23
SF3B2-202ENST00000524475 DNAJB1P25685 340 aa16.48■□□□□ 0.23
SF3B2-202ENST00000524475 ADSSP30520 456 aa16.48■□□□□ 0.23
SF3B2-202ENST00000524475 UBE2HP62256 183 aa16.48■□□□□ 0.23
SF3B2-202ENST00000524475 SLC10A6Q3KNW5 377 aa16.48■□□□□ 0.23
SF3B2-202ENST00000524475 DDX53Q86TM3 631 aaKnown RBP16.48■□□□□ 0.23
SF3B2-202ENST00000524475 CD302Q8IX05 232 aa16.48■□□□□ 0.23
SF3B2-202ENST00000524475 SYCP3Q8IZU3 236 aa16.48■□□□□ 0.23
SF3B2-202ENST00000524475 SCFD1Q8WVM8 642 aa16.48■□□□□ 0.23
SF3B2-202ENST00000524475 HPS3Q969F9 1004 aa16.48■□□□□ 0.23
SF3B2-202ENST00000524475 CCDC47Q96A33 483 aaKnown RBP16.48■□□□□ 0.23
SF3B2-202ENST00000524475 NSUN3Q9H649 340 aaKnown RBP16.48■□□□□ 0.23
SF3B2-202ENST00000524475 NGRNQ9NPE2 291 aaKnown RBP16.48■□□□□ 0.23
SF3B2-202ENST00000524475 TLR9Q9NR96 1032 aa16.48■□□□□ 0.23
SF3B2-202ENST00000524475 EXOC1Q9NV70 894 aa16.48■□□□□ 0.23
SF3B2-202ENST00000524475 SLC38A7Q9NVC3 462 aa16.48■□□□□ 0.23
SF3B2-202ENST00000524475 CGNQ9P2M7 1197 aaKnown RBP16.48■□□□□ 0.23
SF3B2-202ENST00000524475 CPSF3Q9UKF6 684 aaKnown RBP16.48■□□□□ 0.23
SF3B2-202ENST00000524475 AGO2Q9UKV8 859 aaKnown RBP16.48■□□□□ 0.23
SF3B2-202ENST00000524475 FAN1Q9Y2M0 1017 aa16.48■□□□□ 0.23
SF3B2-202ENST00000524475 XIRP2A4UGR9 3374 aa16.47■□□□□ 0.23
SF3B2-202ENST00000524475 SMIM28A0A1B0GU29 152 aa16.47■□□□□ 0.23
SF3B2-202ENST00000524475 TMEM189-UBE2V1I3L0A0 370 aa16.47■□□□□ 0.23
SF3B2-202ENST00000524475 NRP1O14786 923 aa16.47■□□□□ 0.23
SF3B2-202ENST00000524475 MEFVO15553 781 aaPredicted RBP16.47■□□□□ 0.23
SF3B2-202ENST00000524475 LDHAP00338 332 aaKnown RBP16.47■□□□□ 0.23
SF3B2-202ENST00000524475 RPN1P04843 607 aaKnown RBP16.47■□□□□ 0.23
SF3B2-202ENST00000524475 HOXD13P35453 343 aa16.47■□□□□ 0.23
SF3B2-202ENST00000524475 PBX3P40426 434 aa16.47■□□□□ 0.23
SF3B2-202ENST00000524475 MATR3P43243 847 aaKnown RBP eCLIP16.47■□□□□ 0.23
SF3B2-202ENST00000524475 KMT5BQ4FZB7 885 aa16.47■□□□□ 0.23
SF3B2-202ENST00000524475 TMEM173Q86WV6 379 aaPredicted RBP16.47■□□□□ 0.23
SF3B2-202ENST00000524475 RNF168Q8IYW5 571 aaPredicted RBP16.47■□□□□ 0.23
SF3B2-202ENST00000524475 GLIS3Q8NEA6 775 aa16.47■□□□□ 0.23
SF3B2-202ENST00000524475 SPATA20Q8TB22 786 aa16.47■□□□□ 0.23
SF3B2-202ENST00000524475 TMEM174Q8WUU8 243 aa16.47■□□□□ 0.23
SF3B2-202ENST00000524475 POMGNT1Q8WZA1 660 aa16.47■□□□□ 0.23
SF3B2-202ENST00000524475 UROC1Q96N76 676 aa16.47■□□□□ 0.23
SF3B2-202ENST00000524475 GBP3Q9H0R5 595 aa16.47■□□□□ 0.23
SF3B2-202ENST00000524475 MARCH5Q9NX47 278 aa16.47■□□□□ 0.23
SF3B2-202ENST00000524475 HOOK1Q9UJC3 728 aaKnown RBP16.47■□□□□ 0.23
SF3B2-202ENST00000524475 BRWD1Q9NSI6 2320 aa16.47■□□□□ 0.23
SF3B2-202ENST00000524475 ANK1P16157 1881 aa16.46■□□□□ 0.23
SF3B2-202ENST00000524475 UNC80Q8N2C7 3258 aa16.46■□□□□ 0.23
SF3B2-202ENST00000524475 FSD2A1L4K1 749 aa16.46■□□□□ 0.23
SF3B2-202ENST00000524475 TISP43B9A030 160 aa16.46■□□□□ 0.23
SF3B2-202ENST00000524475 NT5C1B-RDH14C9J2C7 533 aa16.46■□□□□ 0.23
SF3B2-202ENST00000524475 PRR29P0C7W0 189 aa16.46■□□□□ 0.23
SF3B2-202ENST00000524475 OSTNP61366 133 aa16.46■□□□□ 0.23
SF3B2-202ENST00000524475 COL19A1Q14993 1142 aa16.46■□□□□ 0.23
SF3B2-202ENST00000524475 ENOX2Q16206 610 aaKnown RBP16.46■□□□□ 0.23
SF3B2-202ENST00000524475 GPR65Q8IYL9 337 aa16.46■□□□□ 0.23
SF3B2-202ENST00000524475 KIAA0895Q8NCT3 520 aa16.46■□□□□ 0.23
SF3B2-202ENST00000524475 BCL7CQ8WUZ0 217 aaPredicted RBP16.46■□□□□ 0.23
SF3B2-202ENST00000524475 PPP2R3CQ969Q6 453 aa16.46■□□□□ 0.23
SF3B2-202ENST00000524475 ZMAT2Q96NC0 199 aaKnown RBP16.46■□□□□ 0.23
SF3B2-202ENST00000524475 COLEC11Q9BWP8 271 aa16.46■□□□□ 0.23
SF3B2-202ENST00000524475 CXCL16Q9H2A7 254 aa16.46■□□□□ 0.23
SF3B2-202ENST00000524475 RPF1Q9H9Y2 349 aaKnown RBP16.46■□□□□ 0.23
SF3B2-202ENST00000524475 SLC39A2Q9NP94 309 aa16.46■□□□□ 0.23
SF3B2-202ENST00000524475 IRAK3Q9Y616 596 aa16.46■□□□□ 0.23
SF3B2-202ENST00000524475 TGFB1I1O43294 461 aa16.45■□□□□ 0.22
SF3B2-202ENST00000524475 NCK2O43639 380 aa16.45■□□□□ 0.22
SF3B2-202ENST00000524475 KINO60870 393 aaKnown RBP16.45■□□□□ 0.22
SF3B2-202ENST00000524475 GADD45BO75293 160 aaPredicted RBP16.45■□□□□ 0.22
SF3B2-202ENST00000524475 KIF20AO95235 890 aa16.45■□□□□ 0.22
SF3B2-202ENST00000524475 CXCL8P10145 99 aa16.45■□□□□ 0.22
SF3B2-202ENST00000524475 CYP3A5P20815 502 aa16.45■□□□□ 0.22
SF3B2-202ENST00000524475 OR1G1P47890 313 aa16.45■□□□□ 0.22
SF3B2-202ENST00000524475 PPP2R3AQ06190 1150 aa16.45■□□□□ 0.22
SF3B2-202ENST00000524475 STK4Q13043 487 aa16.45■□□□□ 0.22
SF3B2-202ENST00000524475 HSP90AA2PQ14568 343 aaPredicted RBP16.45■□□□□ 0.22
SF3B2-202ENST00000524475 BMS1Q14692 1282 aaKnown RBP16.45■□□□□ 0.22
SF3B2-202ENST00000524475 ZBTB6Q15916 424 aa16.45■□□□□ 0.22
SF3B2-202ENST00000524475 C12orf56Q8IXR9 622 aa16.45■□□□□ 0.22
SF3B2-202ENST00000524475 GOLGA5Q8TBA6 731 aa16.45■□□□□ 0.22
SF3B2-202ENST00000524475 GSDMAQ96QA5 445 aa16.45■□□□□ 0.22
SF3B2-202ENST00000524475 GTPBP4Q9BZE4 634 aaKnown RBP16.45■□□□□ 0.22
SF3B2-202ENST00000524475 ZBP1Q9H171 429 aa16.45■□□□□ 0.22
SF3B2-202ENST00000524475 ASB7Q9H672 318 aa16.45■□□□□ 0.22
SF3B2-202ENST00000524475 DERAQ9Y315 318 aa16.45■□□□□ 0.22
SF3B2-202ENST00000524475 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.44■□□□□ 0.22
SF3B2-202ENST00000524475 XPOTO43592 962 aaKnown RBP16.44■□□□□ 0.22
SF3B2-202ENST00000524475 EXTL3O43909 919 aa16.44■□□□□ 0.22
SF3B2-202ENST00000524475 SOD2P04179 222 aa16.44■□□□□ 0.22
SF3B2-202ENST00000524475 CTSAP10619 480 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms