RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.71□□□□□ -1.18
VPS11-201ENST00000524454 PLPPR4Q7Z2D5 763 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 RDH13Q8NBN7 331 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 BANK1Q8NDB2 785 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 EHBP1Q8NDI1 1231 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 DBF4BQ8NFT6 615 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 TIFAQ96CG3 184 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 FAM167AQ96KS9 214 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 CCDC43Q96MW1 224 aaKnown RBP7.71□□□□□ -1.18
VPS11-201ENST00000524454 CDX2Q99626 313 aaPredicted RBP7.71□□□□□ -1.18
VPS11-201ENST00000524454 GBP3Q9H0R5 595 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 MTIF3Q9H2K0 278 aaKnown RBP7.71□□□□□ -1.18
VPS11-201ENST00000524454 CERS4Q9HA82 394 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 DMAC2Q9NW81 257 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 TBC1D7Q9P0N9 293 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 CEP72Q9P209 647 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 ARMCX3Q9UH62 379 aaPredicted RBP7.71□□□□□ -1.18
VPS11-201ENST00000524454 EXOC7Q9UPT5 735 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 PPP2R2CQ9Y2T4 447 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.71□□□□□ -1.18
VPS11-201ENST00000524454 CDY2AQ9Y6F7 541 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 LAMA2P24043 3122 aaKnown RBP7.71□□□□□ -1.18
VPS11-201ENST00000524454 ZMYM2Q9UBW7 1377 aa7.71□□□□□ -1.18
VPS11-201ENST00000524454 SSU72P8A0A1W2PR75 194 aa7.7□□□□□ -1.18
VPS11-201ENST00000524454 TTC26A0AVF1 554 aa7.7□□□□□ -1.18
VPS11-201ENST00000524454 LCHNA4D1U4 455 aa7.7□□□□□ -1.18
VPS11-201ENST00000524454 MBLAC1A4D2B0 266 aaPredicted RBP7.7□□□□□ -1.18
VPS11-201ENST00000524454 ZNF862O60290 1169 aa7.7□□□□□ -1.18
VPS11-201ENST00000524454 IPO7O95373 1038 aaKnown RBP7.7□□□□□ -1.18
VPS11-201ENST00000524454 GCNT3O95395 438 aa7.7□□□□□ -1.18
VPS11-201ENST00000524454 LCA5LO95447 670 aa7.7□□□□□ -1.18
VPS11-201ENST00000524454 NR3C1P04150 777 aa7.7□□□□□ -1.18
VPS11-201ENST00000524454 CA3P07451 260 aa7.7□□□□□ -1.18
VPS11-201ENST00000524454 IBSPP21815 317 aaPredicted RBP7.7□□□□□ -1.18
VPS11-201ENST00000524454 KLRC1P26715 233 aa7.7□□□□□ -1.18
VPS11-201ENST00000524454 HOXD13P35453 343 aa7.7□□□□□ -1.18
VPS11-201ENST00000524454 CYLC1P35663 651 aaPredicted RBP7.7□□□□□ -1.18
VPS11-201ENST00000524454 PSMC2P35998 433 aaKnown RBP7.7□□□□□ -1.18
VPS11-201ENST00000524454 RFC5P40937 340 aa7.7□□□□□ -1.18
VPS11-201ENST00000524454 SMTNP53814 917 aa7.7□□□□□ -1.18
VPS11-201ENST00000524454 ADKP55263 362 aaKnown RBP7.7□□□□□ -1.18
VPS11-201ENST00000524454 MRPS6P82932 125 aaKnown RBP7.7□□□□□ -1.18
VPS11-201ENST00000524454 PRKCEQ02156 737 aa7.7□□□□□ -1.18
VPS11-201ENST00000524454 MGAT3Q09327 533 aa7.7□□□□□ -1.18
VPS11-201ENST00000524454 LPIN1Q14693 890 aa7.7□□□□□ -1.18
VPS11-201ENST00000524454 MTHFD1LQ6UB35 978 aa7.7□□□□□ -1.18
VPS11-201ENST00000524454 USP37Q86T82 979 aa7.7□□□□□ -1.18
VPS11-201ENST00000524454 HERC6Q8IVU3 1022 aa7.7□□□□□ -1.18
VPS11-201ENST00000524454 DAW1Q8N136 415 aa7.7□□□□□ -1.18
VPS11-201ENST00000524454 MYCT1Q8N699 235 aa7.7□□□□□ -1.18
VPS11-201ENST00000524454 NEK11Q8NG66 645 aa7.7□□□□□ -1.18
VPS11-201ENST00000524454 PIGOQ8TEQ8 1089 aa7.7□□□□□ -1.18
VPS11-201ENST00000524454 ATP8B4Q8TF62 1192 aa7.7□□□□□ -1.18
VPS11-201ENST00000524454 HPS3Q969F9 1004 aa7.7□□□□□ -1.18
VPS11-201ENST00000524454 ZNF668Q96K58 619 aaPredicted RBP7.7□□□□□ -1.18
VPS11-201ENST00000524454 C16orf45Q96MC5 204 aaPredicted RBP7.7□□□□□ -1.18
VPS11-201ENST00000524454 ACCSQ96QU6 501 aa7.7□□□□□ -1.18
VPS11-201ENST00000524454 PRDM12Q9H4Q4 367 aa7.7□□□□□ -1.18
VPS11-201ENST00000524454 ZNF576Q9H609 170 aa7.7□□□□□ -1.18
VPS11-201ENST00000524454 L2HGDHQ9H9P8 463 aa7.7□□□□□ -1.18
VPS11-201ENST00000524454 LUC7LQ9NQ29 371 aaKnown RBP7.7□□□□□ -1.18
VPS11-201ENST00000524454 WRAP73Q9P2S5 460 aaPredicted RBP7.7□□□□□ -1.18
VPS11-201ENST00000524454 MSRAQ9UJ68 235 aa7.7□□□□□ -1.18
VPS11-201ENST00000524454 GINS2Q9Y248 185 aa7.7□□□□□ -1.18
VPS11-201ENST00000524454 MAFBQ9Y5Q3 323 aaPredicted RBP7.7□□□□□ -1.18
VPS11-201ENST00000524454 BZW2Q9Y6E2 419 aaKnown RBP7.7□□□□□ -1.18
VPS11-201ENST00000524454 NLRC5Q86WI3 1866 aa7.7□□□□□ -1.18
VPS11-201ENST00000524454 KIAA1671Q9BY89 1806 aa7.69□□□□□ -1.18
VPS11-201ENST00000524454 NPHP3-ACAD11A0A0J9YXS1 232 aa7.69□□□□□ -1.18
VPS11-201ENST00000524454 RRN3P2A6NIE6 340 aa7.69□□□□□ -1.18
VPS11-201ENST00000524454 EIF3CLB5ME19 914 aaKnown RBP7.69□□□□□ -1.18
VPS11-201ENST00000524454 RFXAPO00287 272 aa7.69□□□□□ -1.18
VPS11-201ENST00000524454 TGFB1I1O43294 461 aa7.69□□□□□ -1.18
VPS11-201ENST00000524454 CTIFO43310 598 aaKnown RBP7.69□□□□□ -1.18
VPS11-201ENST00000524454 HBP1O60381 514 aa7.69□□□□□ -1.18
VPS11-201ENST00000524454 N4BP1O75113 896 aaKnown RBP7.69□□□□□ -1.18
VPS11-201ENST00000524454 HIP1RO75146 1068 aa7.69□□□□□ -1.18
VPS11-201ENST00000524454 GFPT2O94808 682 aa7.69□□□□□ -1.18
VPS11-201ENST00000524454 UPP2O95045 317 aa7.69□□□□□ -1.18
VPS11-201ENST00000524454 C22orf31O95567 290 aa7.69□□□□□ -1.18
VPS11-201ENST00000524454 AFPP02771 609 aaKnown RBP7.69□□□□□ -1.18
VPS11-201ENST00000524454 VTNP04004 478 aa7.69□□□□□ -1.18
VPS11-201ENST00000524454 CD52P31358 61 aa7.69□□□□□ -1.18
VPS11-201ENST00000524454 SSTR3P32745 418 aaPredicted RBP7.69□□□□□ -1.18
VPS11-201ENST00000524454 GCGRP47871 477 aa7.69□□□□□ -1.18
VPS11-201ENST00000524454 CLCN3P51790 818 aa7.69□□□□□ -1.18
VPS11-201ENST00000524454 CASP5P51878 434 aa7.69□□□□□ -1.18
VPS11-201ENST00000524454 IKBKEQ14164 716 aa7.69□□□□□ -1.18
VPS11-201ENST00000524454 RAB30Q15771 203 aa7.69□□□□□ -1.18
VPS11-201ENST00000524454 PLEKHG4Q58EX7 1191 aa7.69□□□□□ -1.18
VPS11-201ENST00000524454 FAM26DQ5JW98 314 aa7.69□□□□□ -1.18
VPS11-201ENST00000524454 PPP2R2DQ66LE6 453 aa7.69□□□□□ -1.18
VPS11-201ENST00000524454 PLA2G4FQ68DD2 849 aa7.69□□□□□ -1.18
VPS11-201ENST00000524454 INTS8Q75QN2 995 aaKnown RBP7.69□□□□□ -1.18
VPS11-201ENST00000524454 MAP4K3Q8IVH8 894 aa7.69□□□□□ -1.18
VPS11-201ENST00000524454 REXO1L1PQ8IX06 675 aa7.69□□□□□ -1.18
VPS11-201ENST00000524454 LRRC71Q8N4P6 559 aa7.69□□□□□ -1.18
VPS11-201ENST00000524454 METTL13Q8N6R0 699 aa7.69□□□□□ -1.18
VPS11-201ENST00000524454 GLIS3Q8NEA6 775 aa7.69□□□□□ -1.18
VPS11-201ENST00000524454 UBE2Q2Q8WVN8 375 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms