RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 MICALL1Q8N3F8 863 aa13.7□□□□□ -0.22
VEGFA-225ENST00000523950 UROC1Q96N76 676 aa13.7□□□□□ -0.22
VEGFA-225ENST00000523950 PPP1R10Q96QC0 940 aaKnown RBP13.7□□□□□ -0.22
VEGFA-225ENST00000523950 MSTO1Q9BUK6 570 aa13.7□□□□□ -0.22
VEGFA-225ENST00000523950 HAPLN2Q9GZV7 340 aa13.7□□□□□ -0.22
VEGFA-225ENST00000523950 NT5C1B-RDH14C9J2C7 533 aa13.69□□□□□ -0.22
VEGFA-225ENST00000523950 FSCN2O14926 492 aa13.69□□□□□ -0.22
VEGFA-225ENST00000523950 KLRC4O43908 158 aa13.69□□□□□ -0.22
VEGFA-225ENST00000523950 FAM189A1O60320 539 aa13.69□□□□□ -0.22
VEGFA-225ENST00000523950 B4GALT3O60512 393 aa13.69□□□□□ -0.22
VEGFA-225ENST00000523950 LDHAP00338 332 aaKnown RBP13.69□□□□□ -0.22
VEGFA-225ENST00000523950 OSTNP61366 133 aa13.69□□□□□ -0.22
VEGFA-225ENST00000523950 SMC1AQ14683 1233 aaKnown RBP13.69□□□□□ -0.22
VEGFA-225ENST00000523950 NAB2Q15742 525 aa13.69□□□□□ -0.22
VEGFA-225ENST00000523950 BMT2Q1RMZ1 405 aa13.69□□□□□ -0.22
VEGFA-225ENST00000523950 EPM2AIP1Q7L775 607 aaPredicted RBP13.69□□□□□ -0.22
VEGFA-225ENST00000523950 FMR1NBQ8N0W7 255 aaPredicted RBP13.69□□□□□ -0.22
VEGFA-225ENST00000523950 ZNF507Q8TCN5 953 aa13.69□□□□□ -0.22
VEGFA-225ENST00000523950 POMGNT1Q8WZA1 660 aa13.69□□□□□ -0.22
VEGFA-225ENST00000523950 TIGD1Q96MW7 591 aa13.69□□□□□ -0.22
VEGFA-225ENST00000523950 CDCA3Q99618 268 aaPredicted RBP13.69□□□□□ -0.22
VEGFA-225ENST00000523950 TCF25Q9BQ70 676 aa13.69□□□□□ -0.22
VEGFA-225ENST00000523950 EXOC1Q9NV70 894 aa13.69□□□□□ -0.22
VEGFA-225ENST00000523950 MARCH5Q9NX47 278 aa13.69□□□□□ -0.22
VEGFA-225ENST00000523950 HOOK1Q9UJC3 728 aaKnown RBP13.69□□□□□ -0.22
VEGFA-225ENST00000523950 AGO2Q9UKV8 859 aaKnown RBP13.69□□□□□ -0.22
VEGFA-225ENST00000523950 COG5Q9UP83 839 aa13.69□□□□□ -0.22
VEGFA-225ENST00000523950 SMIM28A0A1B0GU29 152 aa13.68□□□□□ -0.22
VEGFA-225ENST00000523950 TTC26A0AVF1 554 aa13.68□□□□□ -0.22
VEGFA-225ENST00000523950 ANKRD63C9JTQ0 380 aa13.68□□□□□ -0.22
VEGFA-225ENST00000523950 TMEM189-UBE2V1I3L0A0 370 aa13.68□□□□□ -0.22
VEGFA-225ENST00000523950 XPOTO43592 962 aaKnown RBP13.68□□□□□ -0.22
VEGFA-225ENST00000523950 PRPF6O94906 941 aaKnown RBP13.68□□□□□ -0.22
VEGFA-225ENST00000523950 ADRB2P07550 413 aa13.68□□□□□ -0.22
VEGFA-225ENST00000523950 CTSAP10619 480 aa13.68□□□□□ -0.22
VEGFA-225ENST00000523950 CASP1P29466 404 aa13.68□□□□□ -0.22
VEGFA-225ENST00000523950 ERVFC1P60507 584 aa13.68□□□□□ -0.22
VEGFA-225ENST00000523950 PPP2R3AQ06190 1150 aa13.68□□□□□ -0.22
VEGFA-225ENST00000523950 KCNA1Q09470 495 aa13.68□□□□□ -0.22
VEGFA-225ENST00000523950 HSP90AA2PQ14568 343 aaPredicted RBP13.68□□□□□ -0.22
VEGFA-225ENST00000523950 COL19A1Q14993 1142 aa13.68□□□□□ -0.22
VEGFA-225ENST00000523950 CCDC85BQ15834 202 aaPredicted RBP13.68□□□□□ -0.22
VEGFA-225ENST00000523950 SLC10A6Q3KNW5 377 aa13.68□□□□□ -0.22
VEGFA-225ENST00000523950 TCEAL5Q5H9L2 206 aa13.68□□□□□ -0.22
VEGFA-225ENST00000523950 TMEM173Q86WV6 379 aaPredicted RBP13.68□□□□□ -0.22
VEGFA-225ENST00000523950 ELOA2Q8IYF1 753 aaPredicted RBP13.68□□□□□ -0.22
VEGFA-225ENST00000523950 GPR65Q8IYL9 337 aa13.68□□□□□ -0.22
VEGFA-225ENST00000523950 GRAMD1CQ8IYS0 662 aa13.68□□□□□ -0.22
VEGFA-225ENST00000523950 ENGASEQ8NFI3 743 aa13.68□□□□□ -0.22
VEGFA-225ENST00000523950 MICAL1Q8TDZ2 1067 aa13.68□□□□□ -0.22
VEGFA-225ENST00000523950 PPM1EQ8WY54 764 aa13.68□□□□□ -0.22
VEGFA-225ENST00000523950 DDX27Q96GQ7 796 aaKnown RBP13.68□□□□□ -0.22
VEGFA-225ENST00000523950 FGFBP2Q9BYJ0 223 aa13.68□□□□□ -0.22
VEGFA-225ENST00000523950 RPF1Q9H9Y2 349 aaKnown RBP13.68□□□□□ -0.22
VEGFA-225ENST00000523950 ENTPD7Q9NQZ7 604 aa13.68□□□□□ -0.22
VEGFA-225ENST00000523950 CGNQ9P2M7 1197 aaKnown RBP13.68□□□□□ -0.22
VEGFA-225ENST00000523950 CPSF3Q9UKF6 684 aaKnown RBP13.68□□□□□ -0.22
VEGFA-225ENST00000523950 SSX2IPQ9Y2D8 614 aa13.68□□□□□ -0.22
VEGFA-225ENST00000523950 PRG3Q9Y2Y8 225 aaPredicted RBP13.68□□□□□ -0.22
VEGFA-225ENST00000523950 IRAK3Q9Y616 596 aa13.68□□□□□ -0.22
VEGFA-225ENST00000523950 ANK1P16157 1881 aa13.67□□□□□ -0.22
VEGFA-225ENST00000523950 TRANK1O15050 2925 aa13.67□□□□□ -0.22
VEGFA-225ENST00000523950 KIF20AO95235 890 aa13.67□□□□□ -0.22
VEGFA-225ENST00000523950 EFEMP2O95967 443 aa13.67□□□□□ -0.22
VEGFA-225ENST00000523950 SOD2P04179 222 aa13.67□□□□□ -0.22
VEGFA-225ENST00000523950 RPN1P04843 607 aaKnown RBP13.67□□□□□ -0.22
VEGFA-225ENST00000523950 CXCL8P10145 99 aa13.67□□□□□ -0.22
VEGFA-225ENST00000523950 CYP3A5P20815 502 aa13.67□□□□□ -0.22
VEGFA-225ENST00000523950 IRS1P35568 1242 aa13.67□□□□□ -0.22
VEGFA-225ENST00000523950 DPYDQ12882 1025 aa13.67□□□□□ -0.22
VEGFA-225ENST00000523950 ELAVL2Q12926 359 aaKnown RBP13.67□□□□□ -0.22
VEGFA-225ENST00000523950 SNW1Q13573 536 aaKnown RBP13.67□□□□□ -0.22
VEGFA-225ENST00000523950 KCNB1Q14721 858 aa13.67□□□□□ -0.22
VEGFA-225ENST00000523950 SKIV2LQ15477 1246 aaKnown RBP13.67□□□□□ -0.22
VEGFA-225ENST00000523950 KMT5BQ4FZB7 885 aa13.67□□□□□ -0.22
VEGFA-225ENST00000523950 GLRA4Q5JXX5 417 aa13.67□□□□□ -0.22
VEGFA-225ENST00000523950 TMC7Q7Z402 723 aa13.67□□□□□ -0.22
VEGFA-225ENST00000523950 RNF168Q8IYW5 571 aaPredicted RBP13.67□□□□□ -0.22
VEGFA-225ENST00000523950 VPS52Q8N1B4 723 aa13.67□□□□□ -0.22
VEGFA-225ENST00000523950 BCL7CQ8WUZ0 217 aaPredicted RBP13.67□□□□□ -0.22
VEGFA-225ENST00000523950 SCFD1Q8WVM8 642 aa13.67□□□□□ -0.22
VEGFA-225ENST00000523950 HPS3Q969F9 1004 aa13.67□□□□□ -0.22
VEGFA-225ENST00000523950 HERC2P3Q9BVR0 1158 aa13.67□□□□□ -0.22
VEGFA-225ENST00000523950 ZBP1Q9H171 429 aa13.67□□□□□ -0.22
VEGFA-225ENST00000523950 ASB7Q9H672 318 aa13.67□□□□□ -0.22
VEGFA-225ENST00000523950 THEGQ9P2T0 379 aa13.67□□□□□ -0.22
VEGFA-225ENST00000523950 ADAM28Q9UKQ2 775 aa13.67□□□□□ -0.22
VEGFA-225ENST00000523950 DERAQ9Y315 318 aa13.67□□□□□ -0.22
VEGFA-225ENST00000523950 SF3B1O75533 1304 aaKnown RBP eCLIP13.66□□□□□ -0.226e-7■■■■■ 31.1
VEGFA-225ENST00000523950 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.66□□□□□ -0.22
VEGFA-225ENST00000523950 CASTOR2A6NHX0 329 aa13.66□□□□□ -0.22
VEGFA-225ENST00000523950 TADA2AO75478 443 aa13.66□□□□□ -0.22
VEGFA-225ENST00000523950 RHOBTB3O94955 611 aa13.66□□□□□ -0.22
VEGFA-225ENST00000523950 ADSSP30520 456 aa13.66□□□□□ -0.22
VEGFA-225ENST00000523950 RPL9P32969 192 aaKnown RBP13.66□□□□□ -0.22
VEGFA-225ENST00000523950 TNFSF9P41273 254 aa13.66□□□□□ -0.22
VEGFA-225ENST00000523950 UBE2HP62256 183 aa13.66□□□□□ -0.22
VEGFA-225ENST00000523950 ENOX2Q16206 610 aaKnown RBP13.66□□□□□ -0.22
VEGFA-225ENST00000523950 TPRNQ4KMQ1 711 aa13.66□□□□□ -0.22
VEGFA-225ENST00000523950 SEZ6Q53EL9 994 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms