RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	NECAB2	Q7Z6G3	386 aa		6	□□□□□ -1.45
SREK1-213	ENST00000523655	STRA8	Q7Z7C7	330 aa		6	□□□□□ -1.45
SREK1-213	ENST00000523655	CXorf67	Q86X51	503 aa	Predicted RBP	6	□□□□□ -1.45
SREK1-213	ENST00000523655	XYLT1	Q86Y38	959 aa		6	□□□□□ -1.45
SREK1-213	ENST00000523655	LDLRAD3	Q86YD5	345 aa		6	□□□□□ -1.45
SREK1-213	ENST00000523655	PASD1	Q8IV76	773 aa		6	□□□□□ -1.45
SREK1-213	ENST00000523655	MDGA1	Q8NFP4	955 aa		6	□□□□□ -1.45
SREK1-213	ENST00000523655	OR5M3	Q8NGP4	307 aa		6	□□□□□ -1.45
SREK1-213	ENST00000523655	PPP1R14C	Q8TAE6	165 aa		6	□□□□□ -1.45
SREK1-213	ENST00000523655	GAB3	Q8WWW8	586 aa		6	□□□□□ -1.45
SREK1-213	ENST00000523655	SLC39A13	Q96H72	371 aa		6	□□□□□ -1.45
SREK1-213	ENST00000523655	CPEB1	Q9BZB8	566 aa	Known RBP	6	□□□□□ -1.45
SREK1-213	ENST00000523655	ENKD1	Q9H0I2	346 aa		6	□□□□□ -1.45
SREK1-213	ENST00000523655	NRDE2	Q9H7Z3	1164 aa		6	□□□□□ -1.45
SREK1-213	ENST00000523655	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	6	□□□□□ -1.45
SREK1-213	ENST00000523655	BCL9L	Q86UU0	1499 aa		6	□□□□□ -1.45
SREK1-213	ENST00000523655	ABCC1	P33527	1531 aa		5.99	□□□□□ -1.45
SREK1-213	ENST00000523655	XIRP1	Q702N8	1843 aa	Known RBP	5.99	□□□□□ -1.45
SREK1-213	ENST00000523655	NWD1	Q149M9	1564 aa		5.99	□□□□□ -1.45
SREK1-213	ENST00000523655	GRXCR1	A8MXD5	290 aa		5.99	□□□□□ -1.45
SREK1-213	ENST00000523655	HOXA3	O43365	443 aa	Predicted RBP	5.99	□□□□□ -1.45
SREK1-213	ENST00000523655	KATNA1	O75449	491 aa		5.99	□□□□□ -1.45
SREK1-213	ENST00000523655	SCGB1D2	O95969	90 aa		5.99	□□□□□ -1.45
SREK1-213	ENST00000523655	LPL	P06858	475 aa		5.99	□□□□□ -1.45
SREK1-213	ENST00000523655	PPARA	Q07869	468 aa		5.99	□□□□□ -1.45
SREK1-213	ENST00000523655	HLTF	Q14527	1009 aa	Known RBP eCLIP	5.99	□□□□□ -1.45
SREK1-213	ENST00000523655	SART3	Q15020	963 aa	Known RBP	5.99	□□□□□ -1.45
SREK1-213	ENST00000523655	CCDC62	Q6P9F0	684 aa		5.99	□□□□□ -1.45
SREK1-213	ENST00000523655	TSHZ1	Q6ZSZ6	1077 aa		5.99	□□□□□ -1.45
SREK1-213	ENST00000523655	PPM1K	Q8N3J5	372 aa		5.99	□□□□□ -1.45
SREK1-213	ENST00000523655	CDYL2	Q8N8U2	506 aa		5.99	□□□□□ -1.45
SREK1-213	ENST00000523655	ZNF610	Q8N9Z0	462 aa		5.99	□□□□□ -1.45
SREK1-213	ENST00000523655	ST8SIA2	Q92186	375 aa		5.99	□□□□□ -1.45
SREK1-213	ENST00000523655	EPC1	Q9H2F5	836 aa		5.99	□□□□□ -1.45
SREK1-213	ENST00000523655	ZNF768	Q9H5H4	540 aa	Known RBP	5.99	□□□□□ -1.45
SREK1-213	ENST00000523655	EMC7	Q9NPA0	242 aa		5.99	□□□□□ -1.45
SREK1-213	ENST00000523655	EVL	Q9UI08	416 aa	Predicted RBP	5.99	□□□□□ -1.45
SREK1-213	ENST00000523655	KDM5D	Q9BY66	1539 aa		5.99	□□□□□ -1.45
SREK1-213	ENST00000523655	EP400	Q96L91	3159 aa		5.98	□□□□□ -1.45
SREK1-213	ENST00000523655	IQGAP1	P46940	1657 aa		5.98	□□□□□ -1.45
SREK1-213	ENST00000523655	LRRC9	Q6ZRR7	1453 aa		5.98	□□□□□ -1.45
SREK1-213	ENST00000523655	ST20-MTHFS	A0A0A6YYL1	179 aa		5.98	□□□□□ -1.45
SREK1-213	ENST00000523655	AKAP10	O43572	662 aa		5.98	□□□□□ -1.45
SREK1-213	ENST00000523655	CREB3	O43889	395 aa		5.98	□□□□□ -1.45
SREK1-213	ENST00000523655	PLIN1	O60240	522 aa		5.98	□□□□□ -1.45
SREK1-213	ENST00000523655	MFAP3L	O75121	409 aa		5.98	□□□□□ -1.45
SREK1-213	ENST00000523655	SEC24D	O94855	1032 aa	Predicted RBP	5.98	□□□□□ -1.45
SREK1-213	ENST00000523655	MAK	P20794	623 aa		5.98	□□□□□ -1.45
SREK1-213	ENST00000523655	LSS	P48449	732 aa		5.98	□□□□□ -1.45
SREK1-213	ENST00000523655	RAB27A	P51159	221 aa		5.98	□□□□□ -1.45
SREK1-213	ENST00000523655	NEK2	P51955	445 aa		5.98	□□□□□ -1.45
SREK1-213	ENST00000523655	DPT	Q07507	201 aa		5.98	□□□□□ -1.45
SREK1-213	ENST00000523655	MAN2A1	Q16706	1144 aa		5.98	□□□□□ -1.45
SREK1-213	ENST00000523655	CT83	Q5H943	113 aa		5.98	□□□□□ -1.45
SREK1-213	ENST00000523655	RABL3	Q5HYI8	236 aa		5.98	□□□□□ -1.45
SREK1-213	ENST00000523655	AHI1	Q8N157	1196 aa		5.98	□□□□□ -1.45
SREK1-213	ENST00000523655	OR2W6P	Q8NHA6	318 aa		5.98	□□□□□ -1.45
SREK1-213	ENST00000523655	CPPED1	Q9BRF8	314 aa	Predicted RBP	5.98	□□□□□ -1.45
SREK1-213	ENST00000523655	LSM14B	Q9BX40	385 aa	Known RBP	5.98	□□□□□ -1.45
SREK1-213	ENST00000523655	ARNT2	Q9HBZ2	717 aa		5.98	□□□□□ -1.45
SREK1-213	ENST00000523655	TRPS1	Q9UHF7	1281 aa		5.98	□□□□□ -1.45
SREK1-213	ENST00000523655	TRPC5	Q9UL62	973 aa	Predicted RBP	5.98	□□□□□ -1.45
SREK1-213	ENST00000523655	SORCS3	Q9UPU3	1222 aa		5.98	□□□□□ -1.45
SREK1-213	ENST00000523655	COL16A1	Q07092	1604 aa	Predicted RBP	5.98	□□□□□ -1.45
SREK1-213	ENST00000523655	CLTC	Q00610	1675 aa	Known RBP	5.98	□□□□□ -1.45
SREK1-213	ENST00000523655	MLH3	Q9UHC1	1453 aa		5.97	□□□□□ -1.45
SREK1-213	ENST00000523655	TNR	Q92752	1358 aa		5.97	□□□□□ -1.45
SREK1-213	ENST00000523655	DEPDC5	O75140	1603 aa		5.97	□□□□□ -1.45
SREK1-213	ENST00000523655	ABCA6	Q8N139	1617 aa		5.97	□□□□□ -1.45
SREK1-213	ENST00000523655	KDM1A	O60341	852 aa		5.97	□□□□□ -1.45
SREK1-213	ENST00000523655	KRT18	P05783	430 aa	Known RBP	5.97	□□□□□ -1.45
SREK1-213	ENST00000523655	GNAT2	P19087	354 aa		5.97	□□□□□ -1.45
SREK1-213	ENST00000523655	ZFP36	P26651	326 aa	Known RBP	5.97	□□□□□ -1.45
SREK1-213	ENST00000523655	LSP1	P33241	339 aa		5.97	□□□□□ -1.45
SREK1-213	ENST00000523655	MANF	P55145	182 aa	Known RBP	5.97	□□□□□ -1.45
SREK1-213	ENST00000523655	PHC1	P78364	1004 aa		5.97	□□□□□ -1.45
SREK1-213	ENST00000523655	FSTL1	Q12841	308 aa		5.97	□□□□□ -1.45
SREK1-213	ENST00000523655	MTMR1	Q13613	665 aa		5.97	□□□□□ -1.45
SREK1-213	ENST00000523655	PDCD1	Q15116	288 aa		5.97	□□□□□ -1.45
SREK1-213	ENST00000523655	UBE3C	Q15386	1083 aa		5.97	□□□□□ -1.45
SREK1-213	ENST00000523655	CSRP2	Q16527	193 aa		5.97	□□□□□ -1.45
SREK1-213	ENST00000523655	RNF219	Q5W0B1	726 aa	Predicted RBP	5.97	□□□□□ -1.45
SREK1-213	ENST00000523655	ABHD15	Q6UXT9	468 aa		5.97	□□□□□ -1.45
SREK1-213	ENST00000523655	CHPF	Q8IZ52	775 aa		5.97	□□□□□ -1.45
SREK1-213	ENST00000523655	UNC5B	Q8IZJ1	945 aa		5.97	□□□□□ -1.45
SREK1-213	ENST00000523655	MYO1H	Q8N1T3	1032 aa		5.97	□□□□□ -1.45
SREK1-213	ENST00000523655	MLST8	Q9BVC4	326 aa		5.97	□□□□□ -1.45
SREK1-213	ENST00000523655	SLC5A4	Q9NY91	659 aa		5.97	□□□□□ -1.45
SREK1-213	ENST00000523655	COMMD10	Q9Y6G5	202 aa		5.97	□□□□□ -1.45
SREK1-213	ENST00000523655	FAM135A	Q9P2D6	1515 aa		5.96	□□□□□ -1.46
SREK1-213	ENST00000523655		A0A087X1B8	175 aa		5.96	□□□□□ -1.46
SREK1-213	ENST00000523655		A0A1W2PR48	441 aa		5.96	□□□□□ -1.46
SREK1-213	ENST00000523655	MAFG	O15525	162 aa		5.96	□□□□□ -1.46
SREK1-213	ENST00000523655	MTSS1	O43312	755 aa		5.96	□□□□□ -1.46
SREK1-213	ENST00000523655	FAM189B	P81408	668 aa		5.96	□□□□□ -1.46
SREK1-213	ENST00000523655	HDAC1	Q13547	482 aa	Predicted RBP	5.96	□□□□□ -1.46
SREK1-213	ENST00000523655	DHCR24	Q15392	516 aa		5.96	□□□□□ -1.46
SREK1-213	ENST00000523655	DDB1	Q16531	1140 aa		5.96	□□□□□ -1.46
SREK1-213	ENST00000523655	PITRM1	Q5JRX3	1037 aa		5.96	□□□□□ -1.46
SREK1-213	ENST00000523655	GPR158	Q5T848	1215 aa		5.96	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms