RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 ATP2B1P20020 1258 aa10.37□□□□□ -0.75
SDC2-207ENST00000522911 FGFR3P22607 806 aa10.37□□□□□ -0.75
SDC2-207ENST00000522911 FSHRP23945 695 aa10.37□□□□□ -0.75
SDC2-207ENST00000522911 TRAPPC10P48553 1259 aa10.37□□□□□ -0.75
SDC2-207ENST00000522911 PRKCQQ04759 706 aa10.37□□□□□ -0.75
SDC2-207ENST00000522911 PRPF4BQ13523 1007 aaKnown RBP10.37□□□□□ -0.75
SDC2-207ENST00000522911 TRIM29Q14134 588 aa10.37□□□□□ -0.75
SDC2-207ENST00000522911 PSMD5Q16401 504 aa10.37□□□□□ -0.75
SDC2-207ENST00000522911 ZNF528Q3MIS6 628 aa10.37□□□□□ -0.75
SDC2-207ENST00000522911 XKR4Q5GH76 650 aa10.37□□□□□ -0.75
SDC2-207ENST00000522911 ADSSL1Q8N142 457 aa10.37□□□□□ -0.75
SDC2-207ENST00000522911 PJA1Q8NG27 643 aa10.37□□□□□ -0.75
SDC2-207ENST00000522911 ERMNQ8TAM6 284 aa10.37□□□□□ -0.75
SDC2-207ENST00000522911 GPR152Q8TDT2 470 aa10.37□□□□□ -0.75
SDC2-207ENST00000522911 KIFAP3Q92845 792 aa10.37□□□□□ -0.75
SDC2-207ENST00000522911 B3GALT6Q96L58 329 aa10.37□□□□□ -0.75
SDC2-207ENST00000522911 PPP1R10Q96QC0 940 aaKnown RBP10.37□□□□□ -0.75
SDC2-207ENST00000522911 PAAF1Q9BRP4 392 aa10.37□□□□□ -0.75
SDC2-207ENST00000522911 APOL6Q9BWW8 343 aa10.37□□□□□ -0.75
SDC2-207ENST00000522911 FOXP1Q9H334 677 aaPredicted RBP10.37□□□□□ -0.75
SDC2-207ENST00000522911 GPRC5CQ9NQ84 441 aa10.37□□□□□ -0.75
SDC2-207ENST00000522911 MTRRQ9UBK8 725 aa10.37□□□□□ -0.75
SDC2-207ENST00000522911 PARP2Q9UGN5 583 aa10.37□□□□□ -0.75
SDC2-207ENST00000522911 SIT1Q9Y3P8 196 aa10.37□□□□□ -0.75
SDC2-207ENST00000522911 BACE2Q9Y5Z0 518 aa10.37□□□□□ -0.75
SDC2-207ENST00000522911 STK24Q9Y6E0 443 aa10.37□□□□□ -0.75
SDC2-207ENST00000522911 NUMBLQ9Y6R0 609 aa10.37□□□□□ -0.75
SDC2-207ENST00000522911 TTLL13PA6NNM8 815 aa10.36□□□□□ -0.75
SDC2-207ENST00000522911 MED24O75448 989 aa10.36□□□□□ -0.75
SDC2-207ENST00000522911 LARGE1O95461 756 aa10.36□□□□□ -0.75
SDC2-207ENST00000522911 PRKCBP05771 671 aa10.36□□□□□ -0.75
SDC2-207ENST00000522911 C8AP07357 584 aa10.36□□□□□ -0.75
SDC2-207ENST00000522911 SPATA31D3P0C874 917 aa10.36□□□□□ -0.75
SDC2-207ENST00000522911 FXR2P51116 673 aaKnown RBP eCLIP10.36□□□□□ -0.759e-14■□□□□ 8.9
SDC2-207ENST00000522911 PFKPQ01813 784 aa10.36□□□□□ -0.75
SDC2-207ENST00000522911 PDIA5Q14554 519 aa10.36□□□□□ -0.75
SDC2-207ENST00000522911 LIN9Q5TKA1 542 aa10.36□□□□□ -0.75
SDC2-207ENST00000522911 FAM171A1Q5VUB5 890 aa10.36□□□□□ -0.75
SDC2-207ENST00000522911 HAUS3Q68CZ6 603 aa10.36□□□□□ -0.75
SDC2-207ENST00000522911 DCLRE1AQ6PJP8 1040 aa10.36□□□□□ -0.75
SDC2-207ENST00000522911 PRSS55Q6UWB4 352 aaPredicted RBP10.36□□□□□ -0.75
SDC2-207ENST00000522911 ALKAL1Q6UXT8 129 aa10.36□□□□□ -0.75
SDC2-207ENST00000522911 SPATA31D4Q6ZUB0 917 aa10.36□□□□□ -0.75
SDC2-207ENST00000522911 GET4Q7L5D6 327 aaPredicted RBP10.36□□□□□ -0.75
SDC2-207ENST00000522911 APBB1IPQ7Z5R6 666 aaPredicted RBP10.36□□□□□ -0.75
SDC2-207ENST00000522911 CDR2LQ86X02 465 aaPredicted RBP10.36□□□□□ -0.75
SDC2-207ENST00000522911 C1orf210Q8IVY1 113 aa10.36□□□□□ -0.75
SDC2-207ENST00000522911 FGF14Q92915 247 aa10.36□□□□□ -0.75
SDC2-207ENST00000522911 LLPHQ9BRT6 129 aaKnown RBP10.36□□□□□ -0.75
SDC2-207ENST00000522911 SNTG2Q9NY99 539 aa10.36□□□□□ -0.75
SDC2-207ENST00000522911 GDE1Q9NZC3 331 aa10.36□□□□□ -0.75
SDC2-207ENST00000522911 KLK14Q9P0G3 267 aa10.36□□□□□ -0.75
SDC2-207ENST00000522911 FBXO4Q9UKT5 387 aa10.36□□□□□ -0.75
SDC2-207ENST00000522911 OTOGLQ3ZCN5 2332 aa10.36□□□□□ -0.75
SDC2-207ENST00000522911 KANSL1LA0AUZ9 987 aa10.35□□□□□ -0.75
SDC2-207ENST00000522911 ARHGEF37A1IGU5 675 aa10.35□□□□□ -0.75
SDC2-207ENST00000522911 CASTOR2A6NHX0 329 aa10.35□□□□□ -0.75
SDC2-207ENST00000522911 TRAPPC3O43617 180 aa10.35□□□□□ -0.75
SDC2-207ENST00000522911 MICAL2O94851 1124 aa10.35□□□□□ -0.75
SDC2-207ENST00000522911 OR52Z1P0C646 297 aa10.35□□□□□ -0.75
SDC2-207ENST00000522911 RPL17P18621 184 aaKnown RBP10.35□□□□□ -0.75
SDC2-207ENST00000522911 ID4P47928 161 aa10.35□□□□□ -0.75
SDC2-207ENST00000522911 SAFBQ15424 915 aaKnown RBP eCLIP10.35□□□□□ -0.75
SDC2-207ENST00000522911 UPP1Q16831 310 aa10.35□□□□□ -0.75
SDC2-207ENST00000522911 PPM1LQ5SGD2 360 aa10.35□□□□□ -0.75
SDC2-207ENST00000522911 ERICH6BQ5W0A0 696 aa10.35□□□□□ -0.75
SDC2-207ENST00000522911 SLC8B1Q6J4K2 584 aa10.35□□□□□ -0.75
SDC2-207ENST00000522911 PADI6Q6TGC4 694 aa10.35□□□□□ -0.75
SDC2-207ENST00000522911 MAMSTRQ6ZN01 415 aa10.35□□□□□ -0.75
SDC2-207ENST00000522911 ANKS3Q6ZW76 656 aa10.35□□□□□ -0.75
SDC2-207ENST00000522911 GRASPQ7Z6J2 395 aaPredicted RBP10.35□□□□□ -0.75
SDC2-207ENST00000522911 KCTD17Q8N5Z5 321 aa10.35□□□□□ -0.75
SDC2-207ENST00000522911 NECAB1Q8N987 351 aa10.35□□□□□ -0.75
SDC2-207ENST00000522911 IGSF22Q8N9C0 903 aa10.35□□□□□ -0.75
SDC2-207ENST00000522911 BSNDQ8WZ55 320 aa10.35□□□□□ -0.75
SDC2-207ENST00000522911 FGF13Q92913 245 aa10.35□□□□□ -0.75
SDC2-207ENST00000522911 KCNN1Q92952 543 aa10.35□□□□□ -0.75
SDC2-207ENST00000522911 C17orf75Q9HAS0 396 aa10.35□□□□□ -0.75
SDC2-207ENST00000522911 PTPRHQ9HD43 1115 aa10.35□□□□□ -0.75
SDC2-207ENST00000522911 CA14Q9ULX7 337 aa10.35□□□□□ -0.75
SDC2-207ENST00000522911 MAFFQ9ULX9 164 aa10.35□□□□□ -0.75
SDC2-207ENST00000522911 TNFSF13BQ9Y275 285 aa10.35□□□□□ -0.75
SDC2-207ENST00000522911 FANCMQ8IYD8 2048 aa10.34□□□□□ -0.75
SDC2-207ENST00000522911 ARHGEF35A5YM69 484 aa10.34□□□□□ -0.75
SDC2-207ENST00000522911 TBC1D4O60343 1298 aa10.34□□□□□ -0.75
SDC2-207ENST00000522911 JAK2O60674 1132 aa10.34□□□□□ -0.75
SDC2-207ENST00000522911 ECI2O75521 394 aa10.34□□□□□ -0.75
SDC2-207ENST00000522911 ABLIM3O94929 683 aa10.34□□□□□ -0.75
SDC2-207ENST00000522911 EDN1P05305 212 aa10.34□□□□□ -0.75
SDC2-207ENST00000522911 SP9P0CG40 484 aa10.34□□□□□ -0.75
SDC2-207ENST00000522911 GLULP15104 373 aa10.34□□□□□ -0.75
SDC2-207ENST00000522911 MCM7P33993 719 aa10.34□□□□□ -0.75
SDC2-207ENST00000522911 OR1D2P34982 312 aa10.34□□□□□ -0.75
SDC2-207ENST00000522911 GRM5P41594 1212 aa10.34□□□□□ -0.75
SDC2-207ENST00000522911 RPS9P46781 194 aaKnown RBP10.34□□□□□ -0.75
SDC2-207ENST00000522911 ST3GAL1Q11201 340 aa10.34□□□□□ -0.75
SDC2-207ENST00000522911 AXDND1Q5T1B0 1012 aaPredicted RBP10.34□□□□□ -0.75
SDC2-207ENST00000522911 NT5DC1Q5TFE4 455 aa10.34□□□□□ -0.75
SDC2-207ENST00000522911 ATF7IP2Q5U623 682 aa10.34□□□□□ -0.75
SDC2-207ENST00000522911 PARM1Q6UWI2 310 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms