RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 HSP90B1P14625 803 aaKnown RBP4.34□□□□□ -1.71
VPS13B-209ENST00000521559 RABGGTBP53611 331 aa4.34□□□□□ -1.71
VPS13B-209ENST00000521559 KLF10Q13118 480 aa4.34□□□□□ -1.71
VPS13B-209ENST00000521559 MRPL49Q13405 166 aaKnown RBP4.34□□□□□ -1.71
VPS13B-209ENST00000521559 UGT8Q16880 541 aa4.34□□□□□ -1.71
VPS13B-209ENST00000521559 C19orf54Q5BKX5 351 aa4.34□□□□□ -1.71
VPS13B-209ENST00000521559 RABL3Q5HYI8 236 aa4.34□□□□□ -1.71
VPS13B-209ENST00000521559 IQSEC1Q6DN90 963 aa4.34□□□□□ -1.71
VPS13B-209ENST00000521559 SDE2Q6IQ49 451 aa4.34□□□□□ -1.71
VPS13B-209ENST00000521559 CCDC62Q6P9F0 684 aa4.34□□□□□ -1.71
VPS13B-209ENST00000521559 PDZD4Q76G19 769 aaPredicted RBP4.34□□□□□ -1.71
VPS13B-209ENST00000521559 HDGFL2Q7Z4V5 671 aaPredicted RBP4.34□□□□□ -1.71
VPS13B-209ENST00000521559 RNF180Q86T96 592 aa4.34□□□□□ -1.71
VPS13B-209ENST00000521559 THNSL2Q86YJ6 484 aa4.34□□□□□ -1.71
VPS13B-209ENST00000521559 SYNE4Q8N205 404 aa4.34□□□□□ -1.71
VPS13B-209ENST00000521559 RAX2Q96IS3 184 aa4.34□□□□□ -1.71
VPS13B-209ENST00000521559 FAM193BQ96PV7 902 aaPredicted RBP4.34□□□□□ -1.71
VPS13B-209ENST00000521559 CDC5LQ99459 802 aaKnown RBP4.34□□□□□ -1.71
VPS13B-209ENST00000521559 TRIM8Q9BZR9 551 aa4.34□□□□□ -1.71
VPS13B-209ENST00000521559 ENKD1Q9H0I2 346 aa4.34□□□□□ -1.71
VPS13B-209ENST00000521559 SLITRK6Q9H5Y7 841 aa4.34□□□□□ -1.71
VPS13B-209ENST00000521559 MMRN2Q9H8L6 949 aa4.34□□□□□ -1.71
VPS13B-209ENST00000521559 TMPRSS11EQ9UL52 423 aa4.34□□□□□ -1.71
VPS13B-209ENST00000521559 WDR33Q9C0J8 1336 aaKnown RBP4.34□□□□□ -1.71
VPS13B-209ENST00000521559 PLEKHG1Q9ULL1 1385 aa4.34□□□□□ -1.71
VPS13B-209ENST00000521559 NPHP4O75161 1426 aaPredicted RBP4.34□□□□□ -1.71
VPS13B-209ENST00000521559 SCAF11Q99590 1463 aaKnown RBP4.34□□□□□ -1.71
VPS13B-209ENST00000521559 ADGRB3O60242 1522 aa4.34□□□□□ -1.71
VPS13B-209ENST00000521559 SLIT1O75093 1534 aa4.34□□□□□ -1.71
VPS13B-209ENST00000521559 PREX1Q8TCU6 1659 aa4.34□□□□□ -1.71
VPS13B-209ENST00000521559 TMEM131LA2VDJ0 1609 aa4.33□□□□□ -1.72
VPS13B-209ENST00000521559 PIK3C2BO00750 1634 aa4.33□□□□□ -1.72
VPS13B-209ENST00000521559 CLTCL1P53675 1640 aa4.33□□□□□ -1.72
VPS13B-209ENST00000521559 MED14O60244 1454 aa4.33□□□□□ -1.72
VPS13B-209ENST00000521559 TONSLQ96HA7 1378 aa4.33□□□□□ -1.72
VPS13B-209ENST00000521559 KLRG2A4D1S0 409 aaPredicted RBP4.33□□□□□ -1.72
VPS13B-209ENST00000521559 NEMP1O14524 444 aa4.33□□□□□ -1.72
VPS13B-209ENST00000521559 DNAJC6O75061 913 aa4.33□□□□□ -1.72
VPS13B-209ENST00000521559 PHF2O75151 1096 aa4.33□□□□□ -1.72
VPS13B-209ENST00000521559 GASTP01350 101 aa4.33□□□□□ -1.72
VPS13B-209ENST00000521559 CLEC2LP0C7M8 214 aa4.33□□□□□ -1.72
VPS13B-209ENST00000521559 CASRP41180 1078 aa4.33□□□□□ -1.72
VPS13B-209ENST00000521559 DPTQ07507 201 aa4.33□□□□□ -1.72
VPS13B-209ENST00000521559 STRN3Q13033 797 aa4.33□□□□□ -1.72
VPS13B-209ENST00000521559 TOB2Q14106 344 aaPredicted RBP4.33□□□□□ -1.72
VPS13B-209ENST00000521559 UBE3CQ15386 1083 aa4.33□□□□□ -1.72
VPS13B-209ENST00000521559 FSCN1Q16658 493 aaKnown RBP4.33□□□□□ -1.72
VPS13B-209ENST00000521559 DOK3Q7L591 496 aa4.33□□□□□ -1.72
VPS13B-209ENST00000521559 NEU4Q8WWR8 484 aaPredicted RBP4.33□□□□□ -1.72
VPS13B-209ENST00000521559 HAS1Q92839 578 aa4.33□□□□□ -1.72
VPS13B-209ENST00000521559 PRRX2Q99811 253 aa4.33□□□□□ -1.72
VPS13B-209ENST00000521559 FDXACB1Q9BRP7 624 aaPredicted RBP4.33□□□□□ -1.72
VPS13B-209ENST00000521559 EVLQ9UI08 416 aaPredicted RBP4.33□□□□□ -1.72
VPS13B-209ENST00000521559 CDY2AQ9Y6F7 541 aa4.33□□□□□ -1.72
VPS13B-209ENST00000521559 SETD1BQ9UPS6 1966 aaKnown RBP4.33□□□□□ -1.72
VPS13B-209ENST00000521559 MYO3AQ8NEV4 1616 aa4.32□□□□□ -1.72
VPS13B-209ENST00000521559 NEURL4Q96JN8 1562 aa4.32□□□□□ -1.72
VPS13B-209ENST00000521559 LCHNA4D1U4 455 aa4.32□□□□□ -1.72
VPS13B-209ENST00000521559 TMEM191CA6NGB0 347 aa4.32□□□□□ -1.72
VPS13B-209ENST00000521559 PRR5-ARHGAP8B1AHC4 643 aa4.32□□□□□ -1.72
VPS13B-209ENST00000521559 TRIM24O15164 1050 aa4.32□□□□□ -1.72
VPS13B-209ENST00000521559 SUV39H1O43463 412 aa4.32□□□□□ -1.72
VPS13B-209ENST00000521559 PRAMEF4O60810 478 aa4.32□□□□□ -1.72
VPS13B-209ENST00000521559 MTHFD2P13995 350 aa4.32□□□□□ -1.72
VPS13B-209ENST00000521559 HK1P19367 917 aa4.32□□□□□ -1.72
VPS13B-209ENST00000521559 ENPP1P22413 925 aa4.32□□□□□ -1.72
VPS13B-209ENST00000521559 INHBCP55103 352 aa4.32□□□□□ -1.72
VPS13B-209ENST00000521559 LGALS4P56470 323 aa4.32□□□□□ -1.72
VPS13B-209ENST00000521559 APBA1Q02410 837 aa4.32□□□□□ -1.72
VPS13B-209ENST00000521559 NBPF8Q3BBV2 869 aa4.32□□□□□ -1.72
VPS13B-209ENST00000521559 CT83Q5H943 113 aa4.32□□□□□ -1.72
VPS13B-209ENST00000521559 PITRM1Q5JRX3 1037 aa4.32□□□□□ -1.72
VPS13B-209ENST00000521559 FNDC7Q5VTL7 733 aa4.32□□□□□ -1.72
VPS13B-209ENST00000521559 SLC41A1Q8IVJ1 513 aa4.32□□□□□ -1.72
VPS13B-209ENST00000521559 SLC25A43Q8WUT9 341 aaPredicted RBP4.32□□□□□ -1.72
VPS13B-209ENST00000521559 SNX33Q8WV41 574 aa4.32□□□□□ -1.72
VPS13B-209ENST00000521559 PGBD4Q96DM1 585 aa4.32□□□□□ -1.72
VPS13B-209ENST00000521559 CLIP3Q96DZ5 547 aa4.32□□□□□ -1.72
VPS13B-209ENST00000521559 DCLRE1CQ96SD1 692 aaKnown RBP4.32□□□□□ -1.72
VPS13B-209ENST00000521559 KCTD10Q9H3F6 313 aa4.32□□□□□ -1.72
VPS13B-209ENST00000521559 MS4A5Q9H3V2 200 aa4.32□□□□□ -1.72
VPS13B-209ENST00000521559 NRDE2Q9H7Z3 1164 aa4.32□□□□□ -1.72
VPS13B-209ENST00000521559 SLC2A4RGQ9NR83 387 aa4.32□□□□□ -1.72
VPS13B-209ENST00000521559 TRPS1Q9UHF7 1281 aa4.32□□□□□ -1.72
VPS13B-209ENST00000521559 ADAMTS13Q76LX8 1427 aa4.31□□□□□ -1.72
VPS13B-209ENST00000521559 METP08581 1390 aa4.31□□□□□ -1.72
VPS13B-209ENST00000521559 PIK3R4Q99570 1358 aa4.31□□□□□ -1.72
VPS13B-209ENST00000521559 RPTORQ8N122 1335 aa4.31□□□□□ -1.72
VPS13B-209ENST00000521559 B5MCH6 92 aa4.31□□□□□ -1.72
VPS13B-209ENST00000521559 STC2O76061 302 aa4.31□□□□□ -1.72
VPS13B-209ENST00000521559 LPLP06858 475 aa4.31□□□□□ -1.72
VPS13B-209ENST00000521559 MGAT1P26572 445 aa4.31□□□□□ -1.72
VPS13B-209ENST00000521559 MASP1P48740 699 aa4.31□□□□□ -1.72
VPS13B-209ENST00000521559 TRIM25Q14258 630 aaKnown RBP4.31□□□□□ -1.72
VPS13B-209ENST00000521559 VPS72Q15906 364 aa4.31□□□□□ -1.72
VPS13B-209ENST00000521559 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.31□□□□□ -1.72
VPS13B-209ENST00000521559 FAM214AQ32MH5 1076 aa4.31□□□□□ -1.72
VPS13B-209ENST00000521559 GIMAP6Q6P9H5 292 aa4.31□□□□□ -1.72
VPS13B-209ENST00000521559 LYSMD2Q8IV50 215 aa4.31□□□□□ -1.72
VPS13B-209ENST00000521559 ULK2Q8IYT8 1036 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms