RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 ANKRD40Q6AI12 368 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 LRRC55Q6ZSA7 311 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 FRMD5Q7Z6J6 570 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 ZBTB33Q86T24 672 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 FAM114A1Q8IWE2 563 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 THNSL1Q8IYQ7 743 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 SMYD4Q8IYR2 804 aaPredicted RBP6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 ABI1Q8IZP0 508 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 LRRC43Q8N309 656 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 GSTCDQ8NEC7 633 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 URGCPQ8TCY9 931 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 SNX27Q96L92 541 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 UROC1Q96N76 676 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 SAMD11Q96NU1 681 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 CASD1Q96PB1 797 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 TMEM175Q9BSA9 504 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 NXF3Q9H4D5 531 aaKnown RBP6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 THAP9Q9H5L6 903 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 RPF1Q9H9Y2 349 aaKnown RBP6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 RNF19AQ9NV58 838 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 SNTG2Q9NY99 539 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 CXXC1Q9P0U4 656 aaPredicted RBP6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 UBQLN1Q9UMX0 589 aaKnown RBP6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 MAPK8IP1Q9UQF2 711 aa6.92□□□□□ -1.3
IGHV4-55-201ENST00000520889 TNRC18O15417 2968 aaPredicted RBP6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 SMIM28A0A1B0GU29 152 aa6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 SYCE3A1L190 88 aa6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 ARL5CA6NH57 179 aa6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 TISP43B9A030 160 aa6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 CLIC2O15247 247 aa6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 RB1P06400 928 aa6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 THP07101 528 aa6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 EPB41P11171 864 aaKnown RBP6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 LRPAP1P30533 357 aa6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 RPL9P32969 192 aaKnown RBP6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 DEFB103AP81534 67 aa6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 SPAG1Q07617 926 aa6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 CYP24A1Q07973 514 aa6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 DSC1Q08554 894 aa6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 ENOX2Q16206 610 aaKnown RBP6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 NOMO2Q5JPE7 1267 aa6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 CLLU1OSQ5K130 101 aa6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 ISM2Q6H9L7 571 aa6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 LRSAM1Q6UWE0 723 aa6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 CDR2LQ86X02 465 aaPredicted RBP6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 WDR49Q8IV35 697 aa6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 CSGALNACT2Q8N6G5 542 aa6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 CEP120Q8N960 986 aa6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 PARD3BQ8TEW8 1205 aa6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 CACTINQ8WUQ7 758 aaKnown RBP6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 CLP1Q92989 425 aaKnown RBP6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 DDX27Q96GQ7 796 aaKnown RBP6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 BORCS6Q96GS4 357 aa6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 FAXDC2Q96IV6 333 aa6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 PPP1R10Q96QC0 940 aaKnown RBP6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 RPS6KC1Q96S38 1066 aa6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 DUSP9Q99956 384 aaKnown RBP6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 PLVAPQ9BX97 442 aa6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 AAASQ9NRG9 546 aa6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 RBAKQ9NYW8 714 aaPredicted RBP6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 PARP2Q9UGN5 583 aa6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 CTNND2Q9UQB3 1225 aa6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 USP20Q9Y2K6 914 aa6.91□□□□□ -1.3
IGHV4-55-201ENST00000520889 TRIM49BA6NDI0 452 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 LRRC10BA6NIK2 292 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 LACTBL1A8MY62 500 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 C5orf67F2Z3F1 127 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 TMEM189-UBE2V1I3L0A0 370 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 PTGESO14684 152 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 P4HA2O15460 535 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 TLL1O43897 1013 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 AKAP3O75969 853 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 STAU1O95793 577 aaKnown RBP6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 FAM163BP0C2L3 166 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 CXCL8P10145 99 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 KRT13P13646 458 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 LAG3P18627 525 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 AKAP5P24588 427 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 EEF1GP26641 437 aaKnown RBP6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 MLH1P40692 756 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 TNFSF9P41273 254 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 ACOT2P49753 483 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 ZNF165P49910 485 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 CYP2J2P51589 502 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 PMS1P54277 932 aaKnown RBP6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 MYL5Q02045 173 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 BFSP1Q12934 665 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 TUSC3Q13454 348 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 TMEM132DQ14C87 1099 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 NAB2Q15742 525 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 KLHL10Q6JEL2 608 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 GPR153Q6NV75 609 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 CHRDL2Q6WN34 429 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 CBWD2Q8IUF1 395 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 TMEM192Q8IY95 271 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 GPR65Q8IYL9 337 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 FAM186BQ8IYM0 893 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 FIBCD1Q8N539 461 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 BEST2Q8NFU1 509 aa6.9□□□□□ -1.3
IGHV4-55-201ENST00000520889 FAM200AQ8TCP9 573 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms