RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 SLC39A4Q6P5W5 647 aa17.78■□□□□ 0.44
TNPO1-212ENST00000520850 EPM2AIP1Q7L775 607 aaPredicted RBP17.78■□□□□ 0.44
TNPO1-212ENST00000520850 ZBTB33Q86T24 672 aa17.78■□□□□ 0.44
TNPO1-212ENST00000520850 TMEM173Q86WV6 379 aaPredicted RBP17.78■□□□□ 0.44
TNPO1-212ENST00000520850 CEP120Q8N960 986 aa17.78■□□□□ 0.44
TNPO1-212ENST00000520850 ZNF507Q8TCN5 953 aa17.78■□□□□ 0.44
TNPO1-212ENST00000520850 CCDC34Q96HJ3 373 aa17.78■□□□□ 0.44
TNPO1-212ENST00000520850 SNX27Q96L92 541 aa17.78■□□□□ 0.44
TNPO1-212ENST00000520850 GBP3Q9H0R5 595 aa17.78■□□□□ 0.44
TNPO1-212ENST00000520850 SSX2IPQ9Y2D8 614 aa17.78■□□□□ 0.44
TNPO1-212ENST00000520850 TTC26A0AVF1 554 aa17.77■□□□□ 0.44
TNPO1-212ENST00000520850 TMEM189-UBE2V1I3L0A0 370 aa17.77■□□□□ 0.44
TNPO1-212ENST00000520850 ZNF202O95125 648 aa17.77■□□□□ 0.44
TNPO1-212ENST00000520850 LDHAP00338 332 aaKnown RBP17.77■□□□□ 0.44
TNPO1-212ENST00000520850 C1RP00736 705 aa17.77■□□□□ 0.44
TNPO1-212ENST00000520850 GARTP22102 1010 aa17.77■□□□□ 0.44
TNPO1-212ENST00000520850 IRS1P35568 1242 aa17.77■□□□□ 0.44
TNPO1-212ENST00000520850 OR1G1P47890 313 aa17.77■□□□□ 0.44
TNPO1-212ENST00000520850 SMC1AQ14683 1233 aaKnown RBP17.77■□□□□ 0.44
TNPO1-212ENST00000520850 AAK1Q2M2I8 961 aa17.77■□□□□ 0.44
TNPO1-212ENST00000520850 TMEM184AQ6ZMB5 413 aa17.77■□□□□ 0.44
TNPO1-212ENST00000520850 ELOA2Q8IYF1 753 aaPredicted RBP17.77■□□□□ 0.44
TNPO1-212ENST00000520850 VPS52Q8N1B4 723 aa17.77■□□□□ 0.44
TNPO1-212ENST00000520850 MICALL1Q8N3F8 863 aa17.77■□□□□ 0.44
TNPO1-212ENST00000520850 FSIP1Q8NA03 581 aa17.77■□□□□ 0.44
TNPO1-212ENST00000520850 MICAL1Q8TDZ2 1067 aa17.77■□□□□ 0.44
TNPO1-212ENST00000520850 PPM1EQ8WY54 764 aa17.77■□□□□ 0.44
TNPO1-212ENST00000520850 DDX27Q96GQ7 796 aaKnown RBP17.77■□□□□ 0.44
TNPO1-212ENST00000520850 TCF25Q9BQ70 676 aa17.77■□□□□ 0.44
TNPO1-212ENST00000520850 ZBP1Q9H171 429 aa17.77■□□□□ 0.44
TNPO1-212ENST00000520850 MARCH5Q9NX47 278 aa17.77■□□□□ 0.44
TNPO1-212ENST00000520850 ANKFY1Q9P2R3 1169 aa17.77■□□□□ 0.44
TNPO1-212ENST00000520850 THEGQ9P2T0 379 aa17.77■□□□□ 0.44
TNPO1-212ENST00000520850 CPSF3Q9UKF6 684 aaKnown RBP17.77■□□□□ 0.44
TNPO1-212ENST00000520850 UBE4BO95155 1302 aa17.76■□□□□ 0.43
TNPO1-212ENST00000520850 GOLGA6L4A6NEF3 574 aa17.76■□□□□ 0.43
TNPO1-212ENST00000520850 ANKRD63C9JTQ0 380 aa17.76■□□□□ 0.43
TNPO1-212ENST00000520850 SOD2P04179 222 aa17.76■□□□□ 0.43
TNPO1-212ENST00000520850 CYP3A5P20815 502 aa17.76■□□□□ 0.43
TNPO1-212ENST00000520850 ADSSP30520 456 aa17.76■□□□□ 0.43
TNPO1-212ENST00000520850 RPL9P32969 192 aaKnown RBP17.76■□□□□ 0.43
TNPO1-212ENST00000520850 AFMP43652 599 aa17.76■□□□□ 0.43
TNPO1-212ENST00000520850 CASP5P51878 434 aa17.76■□□□□ 0.43
TNPO1-212ENST00000520850 HYAL1Q12794 435 aa17.76■□□□□ 0.43
TNPO1-212ENST00000520850 ADAM15Q13444 863 aa17.76■□□□□ 0.43
TNPO1-212ENST00000520850 CUL4BQ13620 913 aa17.76■□□□□ 0.43
TNPO1-212ENST00000520850 ZBTB6Q15916 424 aa17.76■□□□□ 0.43
TNPO1-212ENST00000520850 FAM26FQ5R3K3 315 aa17.76■□□□□ 0.43
TNPO1-212ENST00000520850 DCLRE1AQ6PJP8 1040 aa17.76■□□□□ 0.43
TNPO1-212ENST00000520850 KRBA2Q6ZNG9 492 aa17.76■□□□□ 0.43
TNPO1-212ENST00000520850 TMC7Q7Z402 723 aa17.76■□□□□ 0.43
TNPO1-212ENST00000520850 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.76■□□□□ 0.43
TNPO1-212ENST00000520850 EFHBQ8N7U6 833 aa17.76■□□□□ 0.43
TNPO1-212ENST00000520850 TMEM174Q8WUU8 243 aa17.76■□□□□ 0.43
TNPO1-212ENST00000520850 MSTO1Q9BUK6 570 aa17.76■□□□□ 0.43
TNPO1-212ENST00000520850 ASB7Q9H672 318 aa17.76■□□□□ 0.43
TNPO1-212ENST00000520850 GDPD2Q9HCC8 539 aa17.76■□□□□ 0.43
TNPO1-212ENST00000520850 CHST7Q9NS84 486 aa17.76■□□□□ 0.43
TNPO1-212ENST00000520850 TBC1D7Q9P0N9 293 aa17.76■□□□□ 0.43
TNPO1-212ENST00000520850 CGNQ9P2M7 1197 aaKnown RBP17.76■□□□□ 0.43
TNPO1-212ENST00000520850 XIRP2A4UGR9 3374 aa17.75■□□□□ 0.43
TNPO1-212ENST00000520850 KLRC4O43908 158 aa17.75■□□□□ 0.43
TNPO1-212ENST00000520850 LILRB3O75022 631 aa17.75■□□□□ 0.43
TNPO1-212ENST00000520850 MYBP10242 640 aa17.75■□□□□ 0.43
TNPO1-212ENST00000520850 MATR3P43243 847 aaKnown RBP eCLIP17.75■□□□□ 0.43
TNPO1-212ENST00000520850 OSTNP61366 133 aa17.75■□□□□ 0.43
TNPO1-212ENST00000520850 MRPS5P82675 430 aaKnown RBP17.75■□□□□ 0.43
TNPO1-212ENST00000520850 KCNA1Q09470 495 aa17.75■□□□□ 0.43
TNPO1-212ENST00000520850 ELAVL2Q12926 359 aaKnown RBP17.75■□□□□ 0.43
TNPO1-212ENST00000520850 KCNC3Q14003 757 aa17.75■□□□□ 0.43
TNPO1-212ENST00000520850 HSP90AA2PQ14568 343 aaPredicted RBP17.75■□□□□ 0.43
TNPO1-212ENST00000520850 UPP1Q16831 310 aa17.75■□□□□ 0.43
TNPO1-212ENST00000520850 BMT2Q1RMZ1 405 aa17.75■□□□□ 0.43
TNPO1-212ENST00000520850 FMR1NBQ8N0W7 255 aaPredicted RBP17.75■□□□□ 0.43
TNPO1-212ENST00000520850 TMEM87AQ8NBN3 555 aa17.75■□□□□ 0.43
TNPO1-212ENST00000520850 ENGASEQ8NFI3 743 aa17.75■□□□□ 0.43
TNPO1-212ENST00000520850 BCL7CQ8WUZ0 217 aaPredicted RBP17.75■□□□□ 0.43
TNPO1-212ENST00000520850 TIGD1Q96MW7 591 aa17.75■□□□□ 0.43
TNPO1-212ENST00000520850 VN1R3Q9BXE9 311 aa17.75■□□□□ 0.43
TNPO1-212ENST00000520850 CXCL16Q9H2A7 254 aa17.75■□□□□ 0.43
TNPO1-212ENST00000520850 TLE6Q9H808 572 aa17.75■□□□□ 0.43
TNPO1-212ENST00000520850 RPF1Q9H9Y2 349 aaKnown RBP17.75■□□□□ 0.43
TNPO1-212ENST00000520850 ENTPD7Q9NQZ7 604 aa17.75■□□□□ 0.43
TNPO1-212ENST00000520850 ADAM28Q9UKQ2 775 aa17.75■□□□□ 0.43
TNPO1-212ENST00000520850 AGO2Q9UKV8 859 aaKnown RBP17.75■□□□□ 0.43
TNPO1-212ENST00000520850 DERAQ9Y315 318 aa17.75■□□□□ 0.43
TNPO1-212ENST00000520850 CITO14578 2027 aa17.75■□□□□ 0.43
TNPO1-212ENST00000520850 MYO7AQ13402 2215 aa17.75■□□□□ 0.43
TNPO1-212ENST00000520850 ATG2AQ2TAZ0 1938 aa17.74■□□□□ 0.43
TNPO1-212ENST00000520850 UNC80Q8N2C7 3258 aa17.74■□□□□ 0.43
TNPO1-212ENST00000520850 TRIP11Q15643 1979 aa17.74■□□□□ 0.43
TNPO1-212ENST00000520850 C2orf71A6NGG8 1288 aa17.74■□□□□ 0.43
TNPO1-212ENST00000520850 MEFVO15553 781 aaPredicted RBP17.74■□□□□ 0.43
TNPO1-212ENST00000520850 CXCL14O95715 111 aa17.74■□□□□ 0.43
TNPO1-212ENST00000520850 PAX3P23760 479 aa17.74■□□□□ 0.43
TNPO1-212ENST00000520850 SNW1Q13573 536 aaKnown RBP17.74■□□□□ 0.43
TNPO1-212ENST00000520850 SKIV2LQ15477 1246 aaKnown RBP17.74■□□□□ 0.43
TNPO1-212ENST00000520850 DUSP6Q16828 381 aa17.74■□□□□ 0.43
TNPO1-212ENST00000520850 PUS10Q3MIT2 529 aaKnown RBP17.74■□□□□ 0.43
TNPO1-212ENST00000520850 NT5DC4Q86YG4 428 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms