RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-208	ENST00000520580	SOX8	P57073	446 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	MAP3K12	Q12852	859 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	SLC13A2	Q13183	592 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	PDXDC1	Q6P996	788 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	MOGAT3	Q86VF5	341 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	TXNRD3	Q86VQ6	643 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	C2CD5	Q86YS7	1000 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	GPR156	Q8NFN8	814 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	RSAD2	Q8WXG1	361 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	MRGPRX1	Q96LB2	322 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	PYM1	Q9BRP8	204 aa	Known RBP	4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	CHCHD6	Q9BRQ6	235 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	COLEC11	Q9BWP8	271 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	KIF17	Q9P2E2	1029 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	IGSF9	Q9P2J2	1179 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	DNAI1	Q9UI46	699 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580		A0A0A6YYK5	440 aa	Predicted RBP	4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	FAM171A2	A8MVW0	826 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	ZGLP1	P0C6A0	271 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	XBP1	P17861	261 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	SDHB	P21912	280 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	COL8A1	P27658	744 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	HK2	P52789	917 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	ANKRD45	Q5TZF3	282 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	ITPRIPL1	Q6GPH6	555 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	GADL1	Q6ZQY3	521 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	UNC13D	Q70J99	1090 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	MPP5	Q8N3R9	675 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	FANCB	Q8NB91	859 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	BRIX1	Q8TDN6	353 aa	Known RBP	4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	STON2	Q8WXE9	905 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	MSLNL	Q96KJ4	702 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	SERINC2	Q96SA4	455 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	UHRF1	Q96T88	793 aa	Predicted RBP	4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	SOX7	Q9BT81	388 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	OSBPL1A	Q9BXW6	950 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	DHX36	Q9H2U1	1008 aa	Known RBP	4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	CARS2	Q9HA77	564 aa	Known RBP	4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	IRAK4	Q9NWZ3	460 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580	SLAMF8	Q9P0V8	285 aa		4.22	□□□□□ -1.73
SREK1-208	ENST00000520580		K7ENM7	598 aa		4.21	□□□□□ -1.73
SREK1-208	ENST00000520580	SYT5	O00445	386 aa		4.21	□□□□□ -1.73
SREK1-208	ENST00000520580	PIK3R2	O00459	728 aa		4.21	□□□□□ -1.73
SREK1-208	ENST00000520580	ADCY6	O43306	1168 aa		4.21	□□□□□ -1.73
SREK1-208	ENST00000520580	ASNA1	O43681	348 aa		4.21	□□□□□ -1.73
SREK1-208	ENST00000520580	SGTA	O43765	313 aa		4.21	□□□□□ -1.73
SREK1-208	ENST00000520580	EN2	P19622	333 aa	Predicted RBP	4.21	□□□□□ -1.73
SREK1-208	ENST00000520580	FUT4	P22083	530 aa		4.21	□□□□□ -1.73
SREK1-208	ENST00000520580	COPB2	P35606	906 aa		4.21	□□□□□ -1.73
SREK1-208	ENST00000520580	STAT5A	P42229	794 aa		4.21	□□□□□ -1.73
SREK1-208	ENST00000520580	KCNJ5	P48544	419 aa		4.21	□□□□□ -1.73
SREK1-208	ENST00000520580	ANTXR2	P58335	489 aa		4.21	□□□□□ -1.73
SREK1-208	ENST00000520580	CYP4F8	P98187	520 aa		4.21	□□□□□ -1.73
SREK1-208	ENST00000520580	PFKP	Q01813	784 aa		4.21	□□□□□ -1.73
SREK1-208	ENST00000520580	RAB30	Q15771	203 aa		4.21	□□□□□ -1.73
SREK1-208	ENST00000520580	CCDC96	Q2M329	555 aa		4.21	□□□□□ -1.73
SREK1-208	ENST00000520580	GJC2	Q5T442	439 aa	Predicted RBP	4.21	□□□□□ -1.73
SREK1-208	ENST00000520580	LCE2C	Q5TA81	110 aa		4.21	□□□□□ -1.73
SREK1-208	ENST00000520580	RNF44	Q7L0R7	432 aa		4.21	□□□□□ -1.73
SREK1-208	ENST00000520580	CPO	Q8IVL8	374 aa		4.21	□□□□□ -1.73
SREK1-208	ENST00000520580	GLIS1	Q8NBF1	620 aa		4.21	□□□□□ -1.73
SREK1-208	ENST00000520580	PCYOX1L	Q8NBM8	494 aa		4.21	□□□□□ -1.73
SREK1-208	ENST00000520580	IFI44	Q8TCB0	444 aa		4.21	□□□□□ -1.73
SREK1-208	ENST00000520580	NETO1	Q8TDF5	533 aa		4.21	□□□□□ -1.73
SREK1-208	ENST00000520580	MAEL	Q96JY0	434 aa	Known RBP	4.21	□□□□□ -1.73
SREK1-208	ENST00000520580	NACC1	Q96RE7	527 aa		4.21	□□□□□ -1.73
SREK1-208	ENST00000520580	STK31	Q9BXU1	1019 aa		4.21	□□□□□ -1.73
SREK1-208	ENST00000520580	PITHD1	Q9GZP4	211 aa	Predicted RBP	4.21	□□□□□ -1.73
SREK1-208	ENST00000520580	TBC1D22B	Q9NU19	505 aa		4.21	□□□□□ -1.73
SREK1-208	ENST00000520580	SRP68	Q9UHB9	627 aa	Known RBP	4.21	□□□□□ -1.73
SREK1-208	ENST00000520580	DBR1	Q9UK59	544 aa	Known RBP	4.21	□□□□□ -1.73
SREK1-208	ENST00000520580	RUVBL1	Q9Y265	456 aa	Known RBP	4.21	□□□□□ -1.73
SREK1-208	ENST00000520580		A0A0B4J269	797 aa		4.21	□□□□□ -1.74
SREK1-208	ENST00000520580	FSD2	A1L4K1	749 aa		4.21	□□□□□ -1.74
SREK1-208	ENST00000520580	TMEM233	B4DJY2	109 aa		4.21	□□□□□ -1.74
SREK1-208	ENST00000520580	BTN3A1	O00481	513 aa		4.21	□□□□□ -1.74
SREK1-208	ENST00000520580	MT-ND5	P03915	603 aa		4.21	□□□□□ -1.74
SREK1-208	ENST00000520580	ECHS1	P30084	290 aa		4.21	□□□□□ -1.74
SREK1-208	ENST00000520580	ADD2	P35612	726 aa		4.21	□□□□□ -1.74
SREK1-208	ENST00000520580	NR1H2	P55055	460 aa		4.21	□□□□□ -1.74
SREK1-208	ENST00000520580	PRKG2	Q13237	762 aa		4.21	□□□□□ -1.74
SREK1-208	ENST00000520580	AOC3	Q16853	763 aa		4.21	□□□□□ -1.74
SREK1-208	ENST00000520580	FAM110C	Q1W6H9	321 aa		4.21	□□□□□ -1.74
SREK1-208	ENST00000520580	C4orf50	Q6ZRC1	276 aa		4.21	□□□□□ -1.74
SREK1-208	ENST00000520580	HTRA1	Q92743	480 aa		4.21	□□□□□ -1.74
SREK1-208	ENST00000520580	HOXB13	Q92826	284 aa	Predicted RBP	4.21	□□□□□ -1.74
SREK1-208	ENST00000520580	SEMA6B	Q9H3T3	888 aa		4.21	□□□□□ -1.74
SREK1-208	ENST00000520580	C19orf44	Q9H6X5	657 aa		4.21	□□□□□ -1.74
SREK1-208	ENST00000520580	MLXIP	Q9HAP2	919 aa		4.21	□□□□□ -1.74
SREK1-208	ENST00000520580	PLEKHA5	Q9HAU0	1116 aa		4.21	□□□□□ -1.74
SREK1-208	ENST00000520580	MKNK2	Q9HBH9	465 aa		4.21	□□□□□ -1.74
SREK1-208	ENST00000520580	AASS	Q9UDR5	926 aa		4.21	□□□□□ -1.74
SREK1-208	ENST00000520580	TBC1D30	Q9Y2I9	924 aa		4.21	□□□□□ -1.74
SREK1-208	ENST00000520580	RAX	Q9Y2V3	346 aa		4.21	□□□□□ -1.74
SREK1-208	ENST00000520580	ITIH6	Q6UXX5	1313 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	RPTOR	Q8N122	1335 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580		A0A0A6YYJ9	748 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	NOTO	A8MTQ0	251 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580		B4E171	279 aa		4.2	□□□□□ -1.74
SREK1-208	ENST00000520580	AREL1	O15033	823 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms