RNA–Protein interactions for RNA: ENST00000520539.5

UBR5-207, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBR5, Length 10,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-207ENST00000520539 ZFP1Q6P2D0 407 aa16.26■□□□□ 0.19
UBR5-207ENST00000520539 CDKL3Q8IVW4 592 aaPredicted RBP16.26■□□□□ 0.19
UBR5-207ENST00000520539 CIDEBQ9UHD4 219 aa16.26■□□□□ 0.19
UBR5-207ENST00000520539 MFAP3LO75121 409 aa16.26■□□□□ 0.19
UBR5-207ENST00000520539 STARP49675 285 aa16.26■□□□□ 0.19
UBR5-207ENST00000520539 ILF2Q12905 390 aaKnown RBP16.26■□□□□ 0.19
UBR5-207ENST00000520539 ARHGEF16Q5VV41 709 aa16.26■□□□□ 0.19
UBR5-207ENST00000520539 FAM133AQ8N9E0 248 aa16.26■□□□□ 0.19
UBR5-207ENST00000520539 KLHL23Q8NBE8 558 aa16.26■□□□□ 0.19
UBR5-207ENST00000520539 C6orf62Q9GZU0 229 aaPredicted RBP16.26■□□□□ 0.19
UBR5-207ENST00000520539 MYH1P12882 1939 aa16.26■□□□□ 0.19
UBR5-207ENST00000520539 MYH2Q9UKX2 1941 aa16.26■□□□□ 0.19
UBR5-207ENST00000520539 MYH4Q9Y623 1939 aa16.26■□□□□ 0.19
UBR5-207ENST00000520539 CXCR5P32302 372 aa16.26■□□□□ 0.19
UBR5-207ENST00000520539 TMEM63BQ5T3F8 832 aa16.26■□□□□ 0.19
UBR5-207ENST00000520539 ULK2Q8IYT8 1036 aa16.26■□□□□ 0.19
UBR5-207ENST00000520539 CHURC1Q8WUH1 139 aa16.26■□□□□ 0.19
UBR5-207ENST00000520539 IFT43Q96FT9 208 aa16.26■□□□□ 0.19
UBR5-207ENST00000520539 TRABDQ9H4I3 376 aa16.26■□□□□ 0.19
UBR5-207ENST00000520539 MLNP12872 115 aa16.26■□□□□ 0.19
UBR5-207ENST00000520539 TMIEQ8NEW7 156 aa16.26■□□□□ 0.19
UBR5-207ENST00000520539 UBASH3BQ8TF42 649 aa16.26■□□□□ 0.19
UBR5-207ENST00000520539 TIMMDC1Q9NPL8 285 aa16.26■□□□□ 0.19
UBR5-207ENST00000520539 PCDHB15Q9Y5E8 787 aa16.26■□□□□ 0.19
UBR5-207ENST00000520539 SNX4O95219 450 aa16.26■□□□□ 0.19
UBR5-207ENST00000520539 GUCA1AP43080 201 aaPredicted RBP16.26■□□□□ 0.19
UBR5-207ENST00000520539 CLHC1Q8NHS4 586 aa16.26■□□□□ 0.19
UBR5-207ENST00000520539 H3BMM5 538 aa16.26■□□□□ 0.19
UBR5-207ENST00000520539 NPM3O75607 178 aaKnown RBP16.26■□□□□ 0.19
UBR5-207ENST00000520539 FNTAP49354 379 aa16.26■□□□□ 0.19
UBR5-207ENST00000520539 SLC7A3Q8WY07 619 aa16.26■□□□□ 0.19
UBR5-207ENST00000520539 VPS33AQ96AX1 596 aa16.26■□□□□ 0.19
UBR5-207ENST00000520539 NSL1Q96IY1 281 aa16.26■□□□□ 0.19
UBR5-207ENST00000520539 LRRC4Q9HBW1 653 aa16.26■□□□□ 0.19
UBR5-207ENST00000520539 FANCD2Q9BXW9 1451 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 ABL1P00519 1130 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 ZNF18P17022 549 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 KRT31Q15323 416 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 EDRF1Q3B7T1 1238 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 MINDY2Q8NBR6 621 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 TMA16Q96EY4 203 aaKnown RBP16.25■□□□□ 0.19
UBR5-207ENST00000520539 CHCHD6Q9BRQ6 235 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 IQGAP2Q13576 1575 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 REREQ9P2R6 1566 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 TRIM49BA6NDI0 452 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 SOWAHDA6NJG2 315 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 TRIM49D1C9J1S8 452 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 NACC1Q96RE7 527 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 ZC3H12CQ9C0D7 883 aaKnown RBP16.25■□□□□ 0.19
UBR5-207ENST00000520539 BAIAP2Q9UQB8 552 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 PRPF4O43172 522 aaKnown RBP eCLIP16.25■□□□□ 0.193e-7■■■■□ 25.1
UBR5-207ENST00000520539 ROR1Q01973 937 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 TNFAIP1Q13829 316 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 DDR2Q16832 855 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 HEATR6Q6AI08 1181 aaKnown RBP16.25■□□□□ 0.19
UBR5-207ENST00000520539 ZBED8Q8IZ13 594 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 ZBTB38Q8NAP3 1195 aaPredicted RBP16.25■□□□□ 0.19
UBR5-207ENST00000520539 BABAM1Q9NWV8 329 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 PEG3Q9GZU2 1588 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 CYP4Z1Q86W10 505 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 FAM227BQ96M60 508 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 EFR3BQ9Y2G0 817 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 MRPL11Q9Y3B7 192 aaKnown RBP16.25■□□□□ 0.19
UBR5-207ENST00000520539 SNX14Q9Y5W7 946 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 CASP4P49662 377 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 RAD23AP54725 363 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 LRRC31Q6UY01 552 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 FRMD8Q9BZ67 464 aaPredicted RBP16.25■□□□□ 0.19
UBR5-207ENST00000520539 NOD2Q9HC29 1040 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 TYK2P29597 1187 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 FBXW10Q5XX13 1052 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 RAD51BO15315 384 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 RASSF6Q6ZTQ3 369 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 CDHR1Q96JP9 859 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 TBXAS1P24557 533 aaPredicted RBP16.25■□□□□ 0.19
UBR5-207ENST00000520539 PLA2G4AP47712 749 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 SLC7A5Q01650 507 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 PRKCQQ04759 706 aa16.25■□□□□ 0.19
UBR5-207ENST00000520539 MAP3K20Q9NYL2 800 aaKnown RBP16.25■□□□□ 0.19
UBR5-207ENST00000520539 TMC2Q8TDI7 906 aa16.24■□□□□ 0.19
UBR5-207ENST00000520539 HERC5Q9UII4 1024 aaKnown RBP16.24■□□□□ 0.19
UBR5-207ENST00000520539 FOSL1P15407 271 aa16.24■□□□□ 0.19
UBR5-207ENST00000520539 GPS1Q13098 491 aa16.24■□□□□ 0.19
UBR5-207ENST00000520539 EHD1Q9H4M9 534 aa16.24■□□□□ 0.19
UBR5-207ENST00000520539 RAD18Q9NS91 495 aa16.24■□□□□ 0.19
UBR5-207ENST00000520539 PFDN2Q9UHV9 154 aa16.24■□□□□ 0.19
UBR5-207ENST00000520539 SYNJ2BP-COX16A0A087WUM0 186 aa16.24■□□□□ 0.19
UBR5-207ENST00000520539 KATNA1O75449 491 aa16.24■□□□□ 0.19
UBR5-207ENST00000520539 MYL2P10916 166 aa16.24■□□□□ 0.19
UBR5-207ENST00000520539 KCNK10P57789 538 aa16.24■□□□□ 0.19
UBR5-207ENST00000520539 AKAP7Q9P0M2 348 aaPredicted RBP16.24■□□□□ 0.19
UBR5-207ENST00000520539 COX16Q9P0S2 106 aa16.24■□□□□ 0.19
UBR5-207ENST00000520539 PA2G4Q9UQ80 394 aaKnown RBP16.24■□□□□ 0.19
UBR5-207ENST00000520539 TM9SF1O15321 606 aa16.24■□□□□ 0.19
UBR5-207ENST00000520539 SNAPC5O75971 98 aa16.24■□□□□ 0.19
UBR5-207ENST00000520539 GRPEL2Q8TAA5 225 aa16.24■□□□□ 0.19
UBR5-207ENST00000520539 HSPH1Q92598 858 aa16.24■□□□□ 0.19
UBR5-207ENST00000520539 ZSCAN10Q96SZ4 725 aaPredicted RBP16.24■□□□□ 0.19
UBR5-207ENST00000520539 PCDHA7Q9UN72 937 aa16.24■□□□□ 0.19
UBR5-207ENST00000520539 ABCC5O15440 1437 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms