RNA–Protein interactions for RNA: ENST00000520105.5

PTP4A3-203, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-203ENST00000520105 RNF39Q9H2S5 420 aa23.29■■□□□ 1.32
PTP4A3-203ENST00000520105 SIK3Q9Y2K2 1263 aa23.29■■□□□ 1.32
PTP4A3-203ENST00000520105 IPPQ9Y573 584 aa23.29■■□□□ 1.32
PTP4A3-203ENST00000520105 LACTBL1A8MY62 500 aa23.28■■□□□ 1.32
PTP4A3-203ENST00000520105 CLTBP09497 229 aa23.28■■□□□ 1.32
PTP4A3-203ENST00000520105 ENPEPQ07075 957 aa23.28■■□□□ 1.32
PTP4A3-203ENST00000520105 DSC3Q14574 896 aa23.28■■□□□ 1.32
PTP4A3-203ENST00000520105 ADAM2Q99965 735 aa23.28■■□□□ 1.32
PTP4A3-203ENST00000520105 CXCL16Q9H2A7 254 aa23.28■■□□□ 1.32
PTP4A3-203ENST00000520105 PCDHB2Q9Y5E7 798 aa23.28■■□□□ 1.32
PTP4A3-203ENST00000520105 TET1Q8NFU7 2136 aa23.28■■□□□ 1.32
PTP4A3-203ENST00000520105 MYL7Q01449 175 aa23.28■■□□□ 1.32
PTP4A3-203ENST00000520105 OR5B17Q8NGF7 314 aa23.28■■□□□ 1.32
PTP4A3-203ENST00000520105 FAM105AQ9NUU6 356 aa23.28■■□□□ 1.32
PTP4A3-203ENST00000520105 TRIP11Q15643 1979 aa23.28■■□□□ 1.32
PTP4A3-203ENST00000520105 CITO14578 2027 aa23.27■■□□□ 1.32
PTP4A3-203ENST00000520105 ANK1P16157 1881 aa23.27■■□□□ 1.32
PTP4A3-203ENST00000520105 SCN5AQ14524 2016 aa23.27■■□□□ 1.32
PTP4A3-203ENST00000520105 TTC26A0AVF1 554 aa23.27■■□□□ 1.32
PTP4A3-203ENST00000520105 STX10O60499 249 aa23.27■■□□□ 1.32
PTP4A3-203ENST00000520105 SLC9A1P19634 815 aa23.27■■□□□ 1.32
PTP4A3-203ENST00000520105 MXI1P50539 228 aa23.27■■□□□ 1.32
PTP4A3-203ENST00000520105 APBA1Q02410 837 aa23.27■■□□□ 1.32
PTP4A3-203ENST00000520105 SV2AQ7L0J3 742 aa23.27■■□□□ 1.32
PTP4A3-203ENST00000520105 CGRRF1Q99675 332 aa23.27■■□□□ 1.32
PTP4A3-203ENST00000520105 TMEM8AQ9HCN3 771 aa23.27■■□□□ 1.32
PTP4A3-203ENST00000520105 LRRN2O75325 713 aa23.26■■□□□ 1.31
PTP4A3-203ENST00000520105 EXOC3L4Q17RC7 722 aa23.26■■□□□ 1.31
PTP4A3-203ENST00000520105 KRT39Q6A163 491 aa23.26■■□□□ 1.31
PTP4A3-203ENST00000520105 GBP6Q6ZN66 633 aa23.26■■□□□ 1.31
PTP4A3-203ENST00000520105 RTN4RL1Q86UN2 441 aaPredicted RBP23.26■■□□□ 1.31
PTP4A3-203ENST00000520105 FAM207AQ9NSI2 230 aaPredicted RBP23.26■■□□□ 1.31
PTP4A3-203ENST00000520105 GCNT4Q9P109 453 aa23.26■■□□□ 1.31
PTP4A3-203ENST00000520105 PARP2Q9UGN5 583 aa23.26■■□□□ 1.31
PTP4A3-203ENST00000520105 RECQL4O94761 1208 aa23.26■■□□□ 1.31
PTP4A3-203ENST00000520105 IL18RAPO95256 599 aa23.26■■□□□ 1.31
PTP4A3-203ENST00000520105 PON1P27169 355 aa23.26■■□□□ 1.31
PTP4A3-203ENST00000520105 GTF2H1P32780 548 aa23.26■■□□□ 1.31
PTP4A3-203ENST00000520105 POU5F1Q01860 360 aaKnown RBP23.26■■□□□ 1.31
PTP4A3-203ENST00000520105 SURF1Q15526 300 aa23.26■■□□□ 1.31
PTP4A3-203ENST00000520105 EFCAB13Q8IY85 973 aa23.26■■□□□ 1.31
PTP4A3-203ENST00000520105 DBF4BQ8NFT6 615 aa23.26■■□□□ 1.31
PTP4A3-203ENST00000520105 CPLX3Q8WVH0 158 aa23.26■■□□□ 1.31
PTP4A3-203ENST00000520105 RNF19AQ9NV58 838 aa23.26■■□□□ 1.31
PTP4A3-203ENST00000520105 KLK14Q9P0G3 267 aa23.26■■□□□ 1.31
PTP4A3-203ENST00000520105 PCDH10Q9P2E7 1040 aa23.26■■□□□ 1.31
PTP4A3-203ENST00000520105 ITIH6Q6UXX5 1313 aa23.26■■□□□ 1.31
PTP4A3-203ENST00000520105 GTPBP10A4D1E9 387 aaKnown RBP23.25■■□□□ 1.31
PTP4A3-203ENST00000520105 C4BPAP04003 597 aaKnown RBP23.25■■□□□ 1.31
PTP4A3-203ENST00000520105 ACTN1P12814 892 aa23.25■■□□□ 1.31
PTP4A3-203ENST00000520105 IBSPP21815 317 aaPredicted RBP23.25■■□□□ 1.31
PTP4A3-203ENST00000520105 YARSP54577 528 aaKnown RBP23.25■■□□□ 1.31
PTP4A3-203ENST00000520105 TBX2Q13207 712 aaPredicted RBP23.25■■□□□ 1.31
PTP4A3-203ENST00000520105 SCARA3Q6AZY7 606 aa23.25■■□□□ 1.31
PTP4A3-203ENST00000520105 JADE1Q6IE81 842 aa23.25■■□□□ 1.31
PTP4A3-203ENST00000520105 WDR49Q8IV35 697 aa23.25■■□□□ 1.31
PTP4A3-203ENST00000520105 LSM14BQ9BX40 385 aaKnown RBP23.25■■□□□ 1.31
PTP4A3-203ENST00000520105 ASB7Q9H672 318 aa23.25■■□□□ 1.31
PTP4A3-203ENST00000520105 PRDM5Q9NQX1 630 aaPredicted RBP23.25■■□□□ 1.31
PTP4A3-203ENST00000520105 TRIM43BA6NCK2 446 aa23.24■■□□□ 1.31
PTP4A3-203ENST00000520105 MEIS3P2A8K0S8 358 aa23.24■■□□□ 1.31
PTP4A3-203ENST00000520105 EPHB6O15197 1021 aa23.24■■□□□ 1.31
PTP4A3-203ENST00000520105 N4BP1O75113 896 aaKnown RBP23.24■■□□□ 1.31
PTP4A3-203ENST00000520105 NFICP08651 508 aa23.24■■□□□ 1.31
PTP4A3-203ENST00000520105 TFAMQ00059 246 aaKnown RBP23.24■■□□□ 1.31
PTP4A3-203ENST00000520105 GOLGA8FQ08AF8 430 aa23.24■■□□□ 1.31
PTP4A3-203ENST00000520105 GOLGA8DPQ0D2H9 430 aa23.24■■□□□ 1.31
PTP4A3-203ENST00000520105 PLEKHG4Q58EX7 1191 aa23.24■■□□□ 1.31
PTP4A3-203ENST00000520105 TDRD10Q5VZ19 366 aaKnown RBP23.24■■□□□ 1.31
PTP4A3-203ENST00000520105 C15orf39Q6ZRI6 1047 aa23.24■■□□□ 1.31
PTP4A3-203ENST00000520105 CCDC186Q7Z3E2 898 aa23.24■■□□□ 1.31
PTP4A3-203ENST00000520105 TAS1R2Q8TE23 839 aa23.24■■□□□ 1.31
PTP4A3-203ENST00000520105 TRIM43Q96BQ3 446 aaPredicted RBP23.24■■□□□ 1.31
PTP4A3-203ENST00000520105 MTMR12Q9C0I1 747 aa23.24■■□□□ 1.31
PTP4A3-203ENST00000520105 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.24■■□□□ 1.313e-6■□□□□ 9.4
PTP4A3-203ENST00000520105 RNF225M0QZC1 329 aaPredicted RBP23.24■■□□□ 1.31
PTP4A3-203ENST00000520105 P4HA2O15460 535 aa23.24■■□□□ 1.31
PTP4A3-203ENST00000520105 GYPCP04921 128 aa23.24■■□□□ 1.31
PTP4A3-203ENST00000520105 TRIM21P19474 475 aaKnown RBP23.24■■□□□ 1.31
PTP4A3-203ENST00000520105 ITGB8P26012 769 aa23.24■■□□□ 1.31
PTP4A3-203ENST00000520105 ZACNQ401N2 412 aa23.24■■□□□ 1.31
PTP4A3-203ENST00000520105 ALKAL1Q6UXT8 129 aa23.24■■□□□ 1.31
PTP4A3-203ENST00000520105 TMEM130Q8N3G9 435 aa23.24■■□□□ 1.31
PTP4A3-203ENST00000520105 LMO3Q8TAP4 145 aa23.24■■□□□ 1.31
PTP4A3-203ENST00000520105 SEMA4DQ92854 862 aa23.24■■□□□ 1.31
PTP4A3-203ENST00000520105 LPPQ93052 612 aa23.24■■□□□ 1.31
PTP4A3-203ENST00000520105 SNX27Q96L92 541 aa23.24■■□□□ 1.31
PTP4A3-203ENST00000520105 TRAIPQ9BWF2 469 aa23.24■■□□□ 1.31
PTP4A3-203ENST00000520105 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.24■■□□□ 1.312e-6■■■■■ 71
PTP4A3-203ENST00000520105 IMPACTQ9P2X3 320 aa23.24■■□□□ 1.31
PTP4A3-203ENST00000520105 A0A0U1RQF3 1178 aa23.23■■□□□ 1.31
PTP4A3-203ENST00000520105 PMM2O15305 246 aa23.23■■□□□ 1.31
PTP4A3-203ENST00000520105 PTMAP06454 111 aaKnown RBP23.23■■□□□ 1.31
PTP4A3-203ENST00000520105 CETN1Q12798 172 aa23.23■■□□□ 1.31
PTP4A3-203ENST00000520105 BIRC3Q13489 604 aa23.23■■□□□ 1.31
PTP4A3-203ENST00000520105 ARID5BQ14865 1188 aa23.23■■□□□ 1.31
PTP4A3-203ENST00000520105 DUOXA2Q1HG44 320 aa23.23■■□□□ 1.31
PTP4A3-203ENST00000520105 TCTN1Q2MV58 587 aa23.23■■□□□ 1.31
PTP4A3-203ENST00000520105 EPC2Q52LR7 807 aa23.23■■□□□ 1.31
PTP4A3-203ENST00000520105 COL13A1Q5TAT6 717 aaPredicted RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms