RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 NOTCH4Q99466 2003 aa13.01□□□□□ -0.33
POLB-208ENST00000520008 RIF1Q5UIP0 2472 aaKnown RBP13.01□□□□□ -0.33
POLB-208ENST00000520008 FAM186AA6NE01 2351 aa13□□□□□ -0.33
POLB-208ENST00000520008 COL4A3Q01955 1670 aa13□□□□□ -0.33
POLB-208ENST00000520008 ADAM12O43184 909 aa13□□□□□ -0.33
POLB-208ENST00000520008 SEC24BO95487 1268 aa13□□□□□ -0.33
POLB-208ENST00000520008 HNRNPA1P09651 372 aaKnown RBP eCLIP13□□□□□ -0.33
POLB-208ENST00000520008 IGFBP6P24592 240 aaPredicted RBP13□□□□□ -0.33
POLB-208ENST00000520008 FXR2P51116 673 aaKnown RBP eCLIP13□□□□□ -0.33
POLB-208ENST00000520008 ELAVL2Q12926 359 aaKnown RBP13□□□□□ -0.33
POLB-208ENST00000520008 PPP2R5AQ15172 486 aa13□□□□□ -0.33
POLB-208ENST00000520008 SAFBQ15424 915 aaKnown RBP eCLIP13□□□□□ -0.33
POLB-208ENST00000520008 ZNF174Q15697 407 aa13□□□□□ -0.33
POLB-208ENST00000520008 DCAF4L1Q3SXM0 396 aa13□□□□□ -0.33
POLB-208ENST00000520008 HAUS3Q68CZ6 603 aa13□□□□□ -0.33
POLB-208ENST00000520008 PHLDB3Q6NSJ2 640 aa13□□□□□ -0.33
POLB-208ENST00000520008 CD300LGQ6UXG3 332 aa13□□□□□ -0.33
POLB-208ENST00000520008 FBXO18Q8NFZ0 1043 aa13□□□□□ -0.33
POLB-208ENST00000520008 ERMNQ8TAM6 284 aa13□□□□□ -0.33
POLB-208ENST00000520008 GPR152Q8TDT2 470 aa13□□□□□ -0.33
POLB-208ENST00000520008 NKD2Q969F2 451 aaPredicted RBP13□□□□□ -0.33
POLB-208ENST00000520008 PPP1R10Q96QC0 940 aaKnown RBP13□□□□□ -0.33
POLB-208ENST00000520008 ADPGKQ9BRR6 497 aa13□□□□□ -0.33
POLB-208ENST00000520008 LLPHQ9BRT6 129 aaKnown RBP13□□□□□ -0.33
POLB-208ENST00000520008 KIFC3Q9BVG8 833 aa13□□□□□ -0.33
POLB-208ENST00000520008 DLGAP2Q9P1A6 1054 aa13□□□□□ -0.33
POLB-208ENST00000520008 NUMBLQ9Y6R0 609 aa13□□□□□ -0.33
POLB-208ENST00000520008 DNAH14Q0VDD8 3507 aa13□□□□□ -0.33
POLB-208ENST00000520008 SPTBN4Q9H254 2564 aa13□□□□□ -0.33
POLB-208ENST00000520008 TRIP11Q15643 1979 aa13□□□□□ -0.33
POLB-208ENST00000520008 ARHGEF35A5YM69 484 aa12.99□□□□□ -0.33
POLB-208ENST00000520008 C8AP07357 584 aa12.99□□□□□ -0.33
POLB-208ENST00000520008 FGFR3P22607 806 aa12.99□□□□□ -0.33
POLB-208ENST00000520008 TRAPPC10P48553 1259 aa12.99□□□□□ -0.33
POLB-208ENST00000520008 EFNA5P52803 228 aa12.99□□□□□ -0.33
POLB-208ENST00000520008 RAB33AQ14088 237 aa12.99□□□□□ -0.33
POLB-208ENST00000520008 TTC38Q5R3I4 469 aa12.99□□□□□ -0.33
POLB-208ENST00000520008 NT5DC1Q5TFE4 455 aa12.99□□□□□ -0.33
POLB-208ENST00000520008 PDXDC1Q6P996 788 aa12.99□□□□□ -0.33
POLB-208ENST00000520008 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.99□□□□□ -0.33
POLB-208ENST00000520008 GRASPQ7Z6J2 395 aaPredicted RBP12.99□□□□□ -0.33
POLB-208ENST00000520008 CCDC83Q8IWF9 413 aa12.99□□□□□ -0.33
POLB-208ENST00000520008 IGSF22Q8N9C0 903 aa12.99□□□□□ -0.33
POLB-208ENST00000520008 DEPTORQ8TB45 409 aa12.99□□□□□ -0.33
POLB-208ENST00000520008 FGF14Q92915 247 aa12.99□□□□□ -0.33
POLB-208ENST00000520008 C8orf76Q96K31 380 aa12.99□□□□□ -0.33
POLB-208ENST00000520008 BHMT2Q9H2M3 363 aa12.99□□□□□ -0.33
POLB-208ENST00000520008 TBC1D17Q9HA65 648 aa12.99□□□□□ -0.33
POLB-208ENST00000520008 ARHGEF3Q9NR81 526 aa12.99□□□□□ -0.33
POLB-208ENST00000520008 MTRRQ9UBK8 725 aa12.99□□□□□ -0.33
POLB-208ENST00000520008 CA14Q9ULX7 337 aa12.99□□□□□ -0.33
POLB-208ENST00000520008 LIMCH1Q9UPQ0 1083 aa12.99□□□□□ -0.33
POLB-208ENST00000520008 FANCMQ8IYD8 2048 aa12.99□□□□□ -0.33
POLB-208ENST00000520008 ZNF292O60281 2723 aa12.98□□□□□ -0.33
POLB-208ENST00000520008 PATJQ8NI35 1801 aa12.98□□□□□ -0.33
POLB-208ENST00000520008 FSHRP23945 695 aa12.98□□□□□ -0.33
POLB-208ENST00000520008 NTHL1P78549 312 aa12.98□□□□□ -0.33
POLB-208ENST00000520008 UPP1Q16831 310 aa12.98□□□□□ -0.33
POLB-208ENST00000520008 XKR4Q5GH76 650 aa12.98□□□□□ -0.33
POLB-208ENST00000520008 GLRA4Q5JXX5 417 aa12.98□□□□□ -0.33
POLB-208ENST00000520008 PPM1LQ5SGD2 360 aa12.98□□□□□ -0.33
POLB-208ENST00000520008 LIN9Q5TKA1 542 aa12.98□□□□□ -0.33
POLB-208ENST00000520008 ATF7IP2Q5U623 682 aa12.98□□□□□ -0.33
POLB-208ENST00000520008 PARM1Q6UWI2 310 aa12.98□□□□□ -0.33
POLB-208ENST00000520008 ALKAL1Q6UXT8 129 aa12.98□□□□□ -0.33
POLB-208ENST00000520008 RSPO2Q6UXX9 243 aaPredicted RBP12.98□□□□□ -0.33
POLB-208ENST00000520008 CEP57Q86XR8 500 aa12.98□□□□□ -0.33
POLB-208ENST00000520008 DAW1Q8N136 415 aa12.98□□□□□ -0.33
POLB-208ENST00000520008 C3orf58Q8NDZ4 430 aa12.98□□□□□ -0.33
POLB-208ENST00000520008 KIFAP3Q92845 792 aa12.98□□□□□ -0.33
POLB-208ENST00000520008 RPP25Q9BUL9 199 aaKnown RBP12.98□□□□□ -0.33
POLB-208ENST00000520008 POLD4Q9HCU8 107 aa12.98□□□□□ -0.33
POLB-208ENST00000520008 PTPRHQ9HD43 1115 aa12.98□□□□□ -0.33
POLB-208ENST00000520008 PPP4R2Q9NY27 417 aa12.98□□□□□ -0.33
POLB-208ENST00000520008 CDH7Q9ULB5 785 aa12.98□□□□□ -0.33
POLB-208ENST00000520008 TNFSF13BQ9Y275 285 aa12.98□□□□□ -0.33
POLB-208ENST00000520008 GDAQ9Y2T3 454 aa12.98□□□□□ -0.33
POLB-208ENST00000520008 PDCD11Q14690 1871 aaKnown RBP12.97□□□□□ -0.33
POLB-208ENST00000520008 PHLPP2Q6ZVD8 1323 aa12.97□□□□□ -0.33
POLB-208ENST00000520008 ABLIM1O14639 778 aa12.97□□□□□ -0.33
POLB-208ENST00000520008 EIF5BO60841 1220 aaKnown RBP12.97□□□□□ -0.33
POLB-208ENST00000520008 U2AF2P26368 475 aaKnown RBP eCLIP12.97□□□□□ -0.33
POLB-208ENST00000520008 CCT6AP40227 531 aaKnown RBP12.97□□□□□ -0.33
POLB-208ENST00000520008 TOB1P50616 345 aaPredicted RBP12.97□□□□□ -0.33
POLB-208ENST00000520008 CLCNKBP51801 687 aa12.97□□□□□ -0.33
POLB-208ENST00000520008 STARD6P59095 220 aa12.97□□□□□ -0.33
POLB-208ENST00000520008 SOX4Q06945 474 aaPredicted RBP12.97□□□□□ -0.33
POLB-208ENST00000520008 PDIA5Q14554 519 aa12.97□□□□□ -0.33
POLB-208ENST00000520008 NBR1Q14596 966 aa12.97□□□□□ -0.33
POLB-208ENST00000520008 UVSSAQ2YD98 709 aa12.97□□□□□ -0.33
POLB-208ENST00000520008 AXDND1Q5T1B0 1012 aaPredicted RBP12.97□□□□□ -0.33
POLB-208ENST00000520008 RTL10Q7L3V2 364 aa12.97□□□□□ -0.33
POLB-208ENST00000520008 TAS1R3Q7RTX0 852 aa12.97□□□□□ -0.33
POLB-208ENST00000520008 CEP120Q8N960 986 aa12.97□□□□□ -0.33
POLB-208ENST00000520008 SLC7A14Q8TBB6 771 aa12.97□□□□□ -0.33
POLB-208ENST00000520008 FGF13Q92913 245 aa12.97□□□□□ -0.33
POLB-208ENST00000520008 DDX27Q96GQ7 796 aaKnown RBP12.97□□□□□ -0.33
POLB-208ENST00000520008 UROC1Q96N76 676 aa12.97□□□□□ -0.33
POLB-208ENST00000520008 DDX23Q9BUQ8 820 aaKnown RBP12.97□□□□□ -0.33
POLB-208ENST00000520008 GOLGA2P5Q9HBQ8 144 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms