RNA–Protein interactions for RNA: ENST00000519815.5

TRPS1-210, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 3

Gene TRPS1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-210ENST00000519815 RBAKQ9NYW8 714 aaPredicted RBP11.32□□□□□ -0.6
TRPS1-210ENST00000519815 CPSF3Q9UKF6 684 aaKnown RBP11.32□□□□□ -0.6
TRPS1-210ENST00000519815 OGDHLQ9ULD0 1010 aa11.32□□□□□ -0.6
TRPS1-210ENST00000519815 TRPV2Q9Y5S1 764 aa11.32□□□□□ -0.6
TRPS1-210ENST00000519815 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.32□□□□□ -0.6
TRPS1-210ENST00000519815 SCN10AQ9Y5Y9 1956 aa11.31□□□□□ -0.6
TRPS1-210ENST00000519815 LRRIQ3A6PVS8 624 aaPredicted RBP11.31□□□□□ -0.6
TRPS1-210ENST00000519815 ARVCFO00192 962 aa11.31□□□□□ -0.6
TRPS1-210ENST00000519815 MYCP01106 439 aaPredicted RBP11.31□□□□□ -0.6
TRPS1-210ENST00000519815 CLTAP09496 248 aa11.31□□□□□ -0.6
TRPS1-210ENST00000519815 DLATP10515 647 aaKnown RBP11.31□□□□□ -0.6
TRPS1-210ENST00000519815 SKILP12757 684 aa11.31□□□□□ -0.6
TRPS1-210ENST00000519815 FGFR4P22455 802 aa11.31□□□□□ -0.6
TRPS1-210ENST00000519815 PON1P27169 355 aa11.31□□□□□ -0.6
TRPS1-210ENST00000519815 HOXA11P31270 313 aaPredicted RBP11.31□□□□□ -0.6
TRPS1-210ENST00000519815 KRT9P35527 623 aa11.31□□□□□ -0.6
TRPS1-210ENST00000519815 THPOP40225 353 aa11.31□□□□□ -0.6
TRPS1-210ENST00000519815 GCLMP48507 274 aa11.31□□□□□ -0.6
TRPS1-210ENST00000519815 FXR1P51114 621 aaKnown RBP eCLIP11.31□□□□□ -0.6
TRPS1-210ENST00000519815 LBX1P52954 281 aa11.31□□□□□ -0.6
TRPS1-210ENST00000519815 CLDN10P78369 228 aa11.31□□□□□ -0.6
TRPS1-210ENST00000519815 ZBED6P86452 979 aa11.31□□□□□ -0.6
TRPS1-210ENST00000519815 PPP3CAQ08209 521 aa11.31□□□□□ -0.6
TRPS1-210ENST00000519815 GOLGA8FQ08AF8 430 aa11.31□□□□□ -0.6
TRPS1-210ENST00000519815 GOLGA8DPQ0D2H9 430 aa11.31□□□□□ -0.6
TRPS1-210ENST00000519815 CBWD6Q4V339 395 aa11.31□□□□□ -0.6
TRPS1-210ENST00000519815 CBWD3Q5JTY5 395 aa11.31□□□□□ -0.6
TRPS1-210ENST00000519815 CBWD5Q5RIA9 395 aa11.31□□□□□ -0.6
TRPS1-210ENST00000519815 VARS2Q5ST30 1063 aaKnown RBP11.31□□□□□ -0.6
TRPS1-210ENST00000519815 ZBTB41Q5SVQ8 909 aa11.31□□□□□ -0.6
TRPS1-210ENST00000519815 KRT39Q6A163 491 aa11.31□□□□□ -0.6
TRPS1-210ENST00000519815 NOTUMQ6P988 496 aa11.31□□□□□ -0.6
TRPS1-210ENST00000519815 BRSK2Q8IWQ3 736 aa11.31□□□□□ -0.6
TRPS1-210ENST00000519815 THNSL1Q8IYQ7 743 aa11.31□□□□□ -0.6
TRPS1-210ENST00000519815 EHBP1Q8NDI1 1231 aa11.31□□□□□ -0.6
TRPS1-210ENST00000519815 CCDC112Q8NEF3 446 aa11.31□□□□□ -0.6
TRPS1-210ENST00000519815 OR8K1Q8NGG5 319 aa11.31□□□□□ -0.6
TRPS1-210ENST00000519815 POP1Q99575 1024 aaKnown RBP11.31□□□□□ -0.6
TRPS1-210ENST00000519815 TTYH3Q9C0H2 523 aa11.31□□□□□ -0.6
TRPS1-210ENST00000519815 KCNF1Q9H3M0 494 aa11.31□□□□□ -0.6
TRPS1-210ENST00000519815 TMEM8AQ9HCN3 771 aa11.31□□□□□ -0.6
TRPS1-210ENST00000519815 PDE11AQ9HCR9 933 aa11.31□□□□□ -0.6
TRPS1-210ENST00000519815 GCNT4Q9P109 453 aa11.31□□□□□ -0.6
TRPS1-210ENST00000519815 CDY2AQ9Y6F7 541 aa11.31□□□□□ -0.6
TRPS1-210ENST00000519815 KAT6AQ92794 2004 aa11.3□□□□□ -0.6
TRPS1-210ENST00000519815 RNF225M0QZC1 329 aaPredicted RBP11.3□□□□□ -0.6
TRPS1-210ENST00000519815 CAND2O75155 1236 aa11.3□□□□□ -0.6
TRPS1-210ENST00000519815 IL18RAPO95256 599 aa11.3□□□□□ -0.6
TRPS1-210ENST00000519815 CHRNA1P02708 482 aa11.3□□□□□ -0.6
TRPS1-210ENST00000519815 NUDT7P0C024 238 aa11.3□□□□□ -0.6
TRPS1-210ENST00000519815 STAG3L1P0CL83 205 aa11.3□□□□□ -0.6
TRPS1-210ENST00000519815 TNNI1P19237 187 aa11.3□□□□□ -0.6
TRPS1-210ENST00000519815 SLC9A1P19634 815 aa11.3□□□□□ -0.6
TRPS1-210ENST00000519815 TNFSF9P41273 254 aa11.3□□□□□ -0.6
TRPS1-210ENST00000519815 MXI1P50539 228 aa11.3□□□□□ -0.6
TRPS1-210ENST00000519815 AP3M2P53677 418 aa11.3□□□□□ -0.6
TRPS1-210ENST00000519815 LRMPQ12912 555 aa11.3□□□□□ -0.6
TRPS1-210ENST00000519815 DCAF4L1Q3SXM0 396 aa11.3□□□□□ -0.6
TRPS1-210ENST00000519815 SEZ6Q53EL9 994 aa11.3□□□□□ -0.6
TRPS1-210ENST00000519815 KLHDC7AQ5VTJ3 777 aa11.3□□□□□ -0.6
TRPS1-210ENST00000519815 SLC27A1Q6PCB7 646 aa11.3□□□□□ -0.6
TRPS1-210ENST00000519815 CACNA2D4Q7Z3S7 1137 aa11.3□□□□□ -0.6
TRPS1-210ENST00000519815 ZSCAN30Q86W11 494 aa11.3□□□□□ -0.6
TRPS1-210ENST00000519815 CDR2LQ86X02 465 aaPredicted RBP11.3□□□□□ -0.6
TRPS1-210ENST00000519815 TMEM40Q8WWA1 233 aa11.3□□□□□ -0.6
TRPS1-210ENST00000519815 WNT8BQ93098 351 aa11.3□□□□□ -0.6
TRPS1-210ENST00000519815 CGRRF1Q99675 332 aa11.3□□□□□ -0.6
TRPS1-210ENST00000519815 SENP6Q9GZR1 1112 aaPredicted RBP11.3□□□□□ -0.6
TRPS1-210ENST00000519815 TMEM117Q9H0C3 514 aa11.3□□□□□ -0.6
TRPS1-210ENST00000519815 INTS2Q9H0H0 1204 aaKnown RBP11.3□□□□□ -0.6
TRPS1-210ENST00000519815 NUCKS1Q9H1E3 243 aaKnown RBP11.3□□□□□ -0.6
TRPS1-210ENST00000519815 TMX1Q9H3N1 280 aa11.3□□□□□ -0.6
TRPS1-210ENST00000519815 RPF1Q9H9Y2 349 aaKnown RBP11.3□□□□□ -0.6
TRPS1-210ENST00000519815 ABHD10Q9NUJ1 306 aa11.3□□□□□ -0.6
TRPS1-210ENST00000519815 TRMT13Q9NUP7 481 aaKnown RBP11.3□□□□□ -0.6
TRPS1-210ENST00000519815 AGPAT5Q9NUQ2 364 aa11.3□□□□□ -0.6
TRPS1-210ENST00000519815 CEP72Q9P209 647 aa11.3□□□□□ -0.6
TRPS1-210ENST00000519815 ZKSCAN5Q9Y2L8 839 aa11.3□□□□□ -0.6
TRPS1-210ENST00000519815 DAAM1Q9Y4D1 1078 aa11.3□□□□□ -0.6
TRPS1-210ENST00000519815 SIP14410 1827 aa11.3□□□□□ -0.6
TRPS1-210ENST00000519815 EVPLQ92817 2033 aa11.3□□□□□ -0.6
TRPS1-210ENST00000519815 EPHB6O15197 1021 aa11.29□□□□□ -0.6
TRPS1-210ENST00000519815 GPR182O15218 404 aa11.29□□□□□ -0.6
TRPS1-210ENST00000519815 RPS6KA5O75582 802 aa11.29□□□□□ -0.6
TRPS1-210ENST00000519815 NOL4O94818 638 aa11.29□□□□□ -0.6
TRPS1-210ENST00000519815 TFRCP02786 760 aaKnown RBP11.29□□□□□ -0.6
TRPS1-210ENST00000519815 CTSHP09668 335 aa11.29□□□□□ -0.6
TRPS1-210ENST00000519815 CLCN1P35523 988 aa11.29□□□□□ -0.6
TRPS1-210ENST00000519815 CDK7P50613 346 aa11.29□□□□□ -0.6
TRPS1-210ENST00000519815 POLR2FP61218 127 aaKnown RBP11.29□□□□□ -0.6
TRPS1-210ENST00000519815 OSTNP61366 133 aa11.29□□□□□ -0.6
TRPS1-210ENST00000519815 CCZ1BP86790 482 aa11.29□□□□□ -0.6
TRPS1-210ENST00000519815 CCZ1P86791 482 aaPredicted RBP11.29□□□□□ -0.6
TRPS1-210ENST00000519815 MGAT3Q09327 533 aa11.29□□□□□ -0.6
TRPS1-210ENST00000519815 TRIM71Q2Q1W2 868 aaKnown RBP11.29□□□□□ -0.6
TRPS1-210ENST00000519815 EPC2Q52LR7 807 aa11.29□□□□□ -0.6
TRPS1-210ENST00000519815 FAM26DQ5JW98 314 aa11.29□□□□□ -0.6
TRPS1-210ENST00000519815 TRIM65Q6PJ69 517 aa11.29□□□□□ -0.6
TRPS1-210ENST00000519815 SV2AQ7L0J3 742 aa11.29□□□□□ -0.6
TRPS1-210ENST00000519815 WDR49Q8IV35 697 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms