RNA–Protein interactions for RNA: ENST00000519674.1

TRPS1-209, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 3,116 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-209ENST00000519674 CDK5RAP3Q96JB5 506 aa9.03□□□□□ -0.96
TRPS1-209ENST00000519674 CCDC42Q96M95 316 aa9.03□□□□□ -0.96
TRPS1-209ENST00000519674 CGREF1Q99674 301 aa9.03□□□□□ -0.96
TRPS1-209ENST00000519674 ZNF184Q99676 751 aaPredicted RBP9.03□□□□□ -0.96
TRPS1-209ENST00000519674 TAOK3Q9H2K8 898 aa9.03□□□□□ -0.96
TRPS1-209ENST00000519674 RIC8AQ9NPQ8 531 aa9.03□□□□□ -0.96
TRPS1-209ENST00000519674 UBAP1Q9NZ09 502 aa9.03□□□□□ -0.96
TRPS1-209ENST00000519674 PASKQ96RG2 1323 aa9.03□□□□□ -0.96
TRPS1-209ENST00000519674 SMIM31A0A1B0GVY4 71 aa9.02□□□□□ -0.96
TRPS1-209ENST00000519674 H0YIN7 160 aa9.02□□□□□ -0.96
TRPS1-209ENST00000519674 TRAFD1O14545 582 aaPredicted RBP9.02□□□□□ -0.96
TRPS1-209ENST00000519674 UBTFL6P0CB48 400 aaPredicted RBP9.02□□□□□ -0.96
TRPS1-209ENST00000519674 GSTT2P0CG29 244 aa9.02□□□□□ -0.96
TRPS1-209ENST00000519674 GSTT2BP0CG30 244 aa9.02□□□□□ -0.96
TRPS1-209ENST00000519674 EEF2P13639 858 aaKnown RBP9.02□□□□□ -0.96
TRPS1-209ENST00000519674 RGS2P41220 211 aa9.02□□□□□ -0.96
TRPS1-209ENST00000519674 SLC1A4P43007 532 aa9.02□□□□□ -0.96
TRPS1-209ENST00000519674 ACADVLP49748 655 aa9.02□□□□□ -0.96
TRPS1-209ENST00000519674 CYP4A11Q02928 519 aa9.02□□□□□ -0.96
TRPS1-209ENST00000519674 AP1B1Q10567 949 aa9.02□□□□□ -0.96
TRPS1-209ENST00000519674 GRB10Q13322 594 aa9.02□□□□□ -0.96
TRPS1-209ENST00000519674 ORC2Q13416 577 aaPredicted RBP9.02□□□□□ -0.96
TRPS1-209ENST00000519674 KRT72Q14CN4 511 aa9.02□□□□□ -0.96
TRPS1-209ENST00000519674 TNFAIP8L3Q5GJ75 292 aa9.02□□□□□ -0.96
TRPS1-209ENST00000519674 DACT2Q5SW24 774 aa9.02□□□□□ -0.96
TRPS1-209ENST00000519674 LRRC74BQ6ZQY2 392 aa9.02□□□□□ -0.96
TRPS1-209ENST00000519674 UNC13DQ70J99 1090 aa9.02□□□□□ -0.96
TRPS1-209ENST00000519674 DDX42Q86XP3 938 aaKnown RBP eCLIP9.02□□□□□ -0.96
TRPS1-209ENST00000519674 ANKK1Q8NFD2 765 aa9.02□□□□□ -0.96
TRPS1-209ENST00000519674 FLAD1Q8NFF5 587 aa9.02□□□□□ -0.96
TRPS1-209ENST00000519674 FNDC8Q8TC99 324 aa9.02□□□□□ -0.96
TRPS1-209ENST00000519674 MTMR8Q96EF0 704 aa9.02□□□□□ -0.96
TRPS1-209ENST00000519674 NUDT12Q9BQG2 462 aa9.02□□□□□ -0.96
TRPS1-209ENST00000519674 TBC1D10AQ9BXI6 508 aa9.02□□□□□ -0.96
TRPS1-209ENST00000519674 EPB41L4BQ9H329 900 aa9.02□□□□□ -0.96
TRPS1-209ENST00000519674 TLE6Q9H808 572 aa9.02□□□□□ -0.96
TRPS1-209ENST00000519674 TIMMDC1Q9NPL8 285 aa9.02□□□□□ -0.96
TRPS1-209ENST00000519674 FAM198AQ9UFP1 575 aa9.02□□□□□ -0.96
TRPS1-209ENST00000519674 FAM32AQ9Y421 112 aaKnown RBP9.02□□□□□ -0.96
TRPS1-209ENST00000519674 FADS3Q9Y5Q0 445 aa9.02□□□□□ -0.96
TRPS1-209ENST00000519674 GDF11O95390 407 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 LDHAP00338 332 aaKnown RBP9.02□□□□□ -0.97
TRPS1-209ENST00000519674 ZCCHC18P0CG32 403 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 PIM1P11309 404 aaPredicted RBP9.02□□□□□ -0.97
TRPS1-209ENST00000519674 CPA3P15088 417 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 NFKBIAP25963 317 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 EEF1GP26641 437 aaKnown RBP9.02□□□□□ -0.97
TRPS1-209ENST00000519674 FXR2P51116 673 aaKnown RBP eCLIP9.02□□□□□ -0.97
TRPS1-209ENST00000519674 ARPC4P59998 168 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 AMPD3Q01432 767 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 ITGA9Q13797 1035 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 CYLC2Q14093 348 aaPredicted RBP9.02□□□□□ -0.97
TRPS1-209ENST00000519674 SPIDRQ14159 915 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 AOC3Q16853 763 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 CERKLQ49MI3 558 aaPredicted RBP9.02□□□□□ -0.97
TRPS1-209ENST00000519674 PDCD4Q53EL6 469 aaKnown RBP9.02□□□□□ -0.97
TRPS1-209ENST00000519674 EAPPQ56P03 285 aaPredicted RBP9.02□□□□□ -0.97
TRPS1-209ENST00000519674 STRIP1Q5VSL9 837 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 DYMQ7RTS9 669 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 TREML1Q86YW5 311 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 GPIHBP1Q8IV16 184 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 SNX29Q8TEQ0 813 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 SLC7A6OSQ96CW6 309 aaPredicted RBP9.02□□□□□ -0.97
TRPS1-209ENST00000519674 C7orf25Q9BPX7 421 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 PSTPIP2Q9H939 334 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 BLOC1S4Q9NUP1 217 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 MAGEC2Q9UBF1 373 aaPredicted RBP9.02□□□□□ -0.97
TRPS1-209ENST00000519674 CTDP1Q9Y5B0 961 aaPredicted RBP9.02□□□□□ -0.97
TRPS1-209ENST00000519674 A0A1W2PQJ5 194 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 USP17L15C9J2P7 530 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 USP17L13C9JLJ4 530 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 USP17L11C9JVI0 530 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 USP17L18D6R9N7 530 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 USP17L22D6RA61 530 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 USP17L17D6RBQ6 530 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 USP17L19D6RCP7 530 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 USP17L20D6RJB6 530 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 EYA4O95677 639 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 AGTP01019 485 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 USP17L24Q0WX57 530 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 RCN1Q15293 331 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 KHDC1Q4VXA5 237 aaKnown RBP9.02□□□□□ -0.97
TRPS1-209ENST00000519674 ANKRD40Q6AI12 368 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 PPP1R18Q6NYC8 613 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 USP17L6PQ6QN14 398 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 SV2BQ7L1I2 683 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 SH3BP5LQ7L8J4 393 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 KIAA0895Q8NCT3 520 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 LARP4BQ92615 738 aaKnown RBP9.02□□□□□ -0.97
TRPS1-209ENST00000519674 P2RX5Q93086 422 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 CCDC17Q96LX7 622 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 PNMA5Q96PV4 448 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 DUSP9Q99956 384 aaKnown RBP9.02□□□□□ -0.97
TRPS1-209ENST00000519674 OSBPL10Q9BXB5 764 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 RAB34Q9BZG1 259 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 PI4KBQ9UBF8 816 aa9.02□□□□□ -0.97
TRPS1-209ENST00000519674 MYMKA6NI61 221 aa9.01□□□□□ -0.97
TRPS1-209ENST00000519674 CES2O00748 559 aa9.01□□□□□ -0.97
TRPS1-209ENST00000519674 MARCH6O60337 910 aa9.01□□□□□ -0.97
TRPS1-209ENST00000519674 PLEKP08567 350 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms