RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 CD300LGQ6UXG3 332 aa13.69□□□□□ -0.22
CSMD1-205ENST00000519623 ALKAL1Q6UXT8 129 aa13.69□□□□□ -0.22
CSMD1-205ENST00000519623 DTHD1Q6ZMT9 781 aa13.69□□□□□ -0.22
CSMD1-205ENST00000519623 TAS1R3Q7RTX0 852 aa13.69□□□□□ -0.22
CSMD1-205ENST00000519623 PIK3R5Q8WYR1 880 aa13.69□□□□□ -0.22
CSMD1-205ENST00000519623 TMX3Q96JJ7 454 aa13.69□□□□□ -0.22
CSMD1-205ENST00000519623 PPP1R10Q96QC0 940 aaKnown RBP13.69□□□□□ -0.22
CSMD1-205ENST00000519623 MYADMQ96S97 322 aa13.69□□□□□ -0.22
CSMD1-205ENST00000519623 ACO2Q99798 780 aaKnown RBP13.69□□□□□ -0.22
CSMD1-205ENST00000519623 RUSC1Q9BVN2 902 aa13.69□□□□□ -0.22
CSMD1-205ENST00000519623 PRKD2Q9BZL6 878 aa13.69□□□□□ -0.22
CSMD1-205ENST00000519623 TMEM134Q9H6X4 195 aa13.69□□□□□ -0.22
CSMD1-205ENST00000519623 PTPRHQ9HD43 1115 aa13.69□□□□□ -0.22
CSMD1-205ENST00000519623 ZDHHC7Q9NXF8 308 aa13.69□□□□□ -0.22
CSMD1-205ENST00000519623 IGSF9Q9P2J2 1179 aa13.69□□□□□ -0.22
CSMD1-205ENST00000519623 TNFSF13BQ9Y275 285 aa13.69□□□□□ -0.22
CSMD1-205ENST00000519623 VWA8A3KMH1 1905 aa13.68□□□□□ -0.22
CSMD1-205ENST00000519623 CLUHO75153 1309 aa13.68□□□□□ -0.22
CSMD1-205ENST00000519623 CCDC169A6NNP5 214 aa13.68□□□□□ -0.22
CSMD1-205ENST00000519623 ADAM12O43184 909 aa13.68□□□□□ -0.22
CSMD1-205ENST00000519623 ZMYND10O75800 440 aa13.68□□□□□ -0.22
CSMD1-205ENST00000519623 CD2BP2O95400 341 aaKnown RBP13.68□□□□□ -0.22
CSMD1-205ENST00000519623 CENPBP07199 599 aaPredicted RBP13.68□□□□□ -0.22
CSMD1-205ENST00000519623 XKR4Q5GH76 650 aa13.68□□□□□ -0.22
CSMD1-205ENST00000519623 CEP57Q86XR8 500 aa13.68□□□□□ -0.22
CSMD1-205ENST00000519623 TMEM105Q8N8V8 129 aa13.68□□□□□ -0.22
CSMD1-205ENST00000519623 NTPCRQ9BSD7 190 aaKnown RBP13.68□□□□□ -0.22
CSMD1-205ENST00000519623 ARHGAP28Q9P2N2 729 aa13.68□□□□□ -0.22
CSMD1-205ENST00000519623 EPS15L1Q9UBC2 864 aa13.68□□□□□ -0.22
CSMD1-205ENST00000519623 ZFHX2Q9C0A1 2572 aaPredicted RBP13.67□□□□□ -0.22
CSMD1-205ENST00000519623 SMIM28A0A1B0GU29 152 aa13.67□□□□□ -0.22
CSMD1-205ENST00000519623 SFI1A8K8P3 1242 aa13.67□□□□□ -0.22
CSMD1-205ENST00000519623 TMEM189-UBE2V1I3L0A0 370 aa13.67□□□□□ -0.22
CSMD1-205ENST00000519623 NPR3P17342 541 aa13.67□□□□□ -0.22
CSMD1-205ENST00000519623 FGFR3P22607 806 aa13.67□□□□□ -0.22
CSMD1-205ENST00000519623 GBP2P32456 591 aaPredicted RBP13.67□□□□□ -0.22
CSMD1-205ENST00000519623 CLCN5P51795 746 aa13.67□□□□□ -0.22
CSMD1-205ENST00000519623 ATP2C1P98194 919 aaPredicted RBP13.67□□□□□ -0.22
CSMD1-205ENST00000519623 ELAVL2Q12926 359 aaKnown RBP13.67□□□□□ -0.22
CSMD1-205ENST00000519623 PSMD5Q16401 504 aa13.67□□□□□ -0.22
CSMD1-205ENST00000519623 UPP1Q16831 310 aa13.67□□□□□ -0.22
CSMD1-205ENST00000519623 RILPL1Q5EBL4 403 aa13.67□□□□□ -0.22
CSMD1-205ENST00000519623 GLRA4Q5JXX5 417 aa13.67□□□□□ -0.22
CSMD1-205ENST00000519623 HYIQ5T013 277 aa13.67□□□□□ -0.22
CSMD1-205ENST00000519623 MCTP1Q6DN14 999 aa13.67□□□□□ -0.22
CSMD1-205ENST00000519623 ASTLQ6HA08 431 aaPredicted RBP13.67□□□□□ -0.22
CSMD1-205ENST00000519623 DCLRE1AQ6PJP8 1040 aa13.67□□□□□ -0.22
CSMD1-205ENST00000519623 CEP120Q8N960 986 aa13.67□□□□□ -0.22
CSMD1-205ENST00000519623 RSAD2Q8WXG1 361 aa13.67□□□□□ -0.22
CSMD1-205ENST00000519623 STAMQ92783 540 aa13.67□□□□□ -0.22
CSMD1-205ENST00000519623 PNMA5Q96PV4 448 aa13.67□□□□□ -0.22
CSMD1-205ENST00000519623 TARS2Q9BW92 718 aaKnown RBP13.67□□□□□ -0.22
CSMD1-205ENST00000519623 PIDD1Q9HB75 910 aa13.67□□□□□ -0.22
CSMD1-205ENST00000519623 FBXW11Q9UKB1 542 aa13.67□□□□□ -0.22
CSMD1-205ENST00000519623 DUSP12Q9UNI6 340 aa13.67□□□□□ -0.22
CSMD1-205ENST00000519623 RBM19Q9Y4C8 960 aaKnown RBP13.67□□□□□ -0.22
CSMD1-205ENST00000519623 H0Y858 1186 aa13.66□□□□□ -0.22
CSMD1-205ENST00000519623 ABLIM1O14639 778 aa13.66□□□□□ -0.22
CSMD1-205ENST00000519623 GALR2O43603 387 aaPredicted RBP13.66□□□□□ -0.22
CSMD1-205ENST00000519623 NARSO43776 548 aaKnown RBP13.66□□□□□ -0.22
CSMD1-205ENST00000519623 ST18O60284 1047 aa13.66□□□□□ -0.22
CSMD1-205ENST00000519623 B3GAT3O94766 335 aa13.66□□□□□ -0.22
CSMD1-205ENST00000519623 LAMP2P13473 410 aa13.66□□□□□ -0.22
CSMD1-205ENST00000519623 PROZP22891 400 aa13.66□□□□□ -0.22
CSMD1-205ENST00000519623 GUCY2CP25092 1073 aa13.66□□□□□ -0.22
CSMD1-205ENST00000519623 GJB2P29033 226 aa13.66□□□□□ -0.22
CSMD1-205ENST00000519623 GRM5P41594 1212 aa13.66□□□□□ -0.22
CSMD1-205ENST00000519623 CLCNKBP51801 687 aa13.66□□□□□ -0.22
CSMD1-205ENST00000519623 SOX4Q06945 474 aaPredicted RBP13.66□□□□□ -0.22
CSMD1-205ENST00000519623 DMP1Q13316 513 aaPredicted RBP13.66□□□□□ -0.22
CSMD1-205ENST00000519623 RSPO2Q6UXX9 243 aaPredicted RBP13.66□□□□□ -0.22
CSMD1-205ENST00000519623 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.66□□□□□ -0.22
CSMD1-205ENST00000519623 APBB1IPQ7Z5R6 666 aaPredicted RBP13.66□□□□□ -0.22
CSMD1-205ENST00000519623 SLC44A3Q8N4M1 653 aa13.66□□□□□ -0.22
CSMD1-205ENST00000519623 DRC1Q96MC2 740 aa13.66□□□□□ -0.22
CSMD1-205ENST00000519623 MRPL4Q9BYD3 311 aaKnown RBP13.66□□□□□ -0.22
CSMD1-205ENST00000519623 CDT1Q9H211 546 aa13.66□□□□□ -0.22
CSMD1-205ENST00000519623 C17orf75Q9HAS0 396 aa13.66□□□□□ -0.22
CSMD1-205ENST00000519623 KMT5AQ9NQR1 393 aa13.66□□□□□ -0.22
CSMD1-205ENST00000519623 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.66□□□□□ -0.22
CSMD1-205ENST00000519623 KIF3AQ9Y496 699 aa13.66□□□□□ -0.22
CSMD1-205ENST00000519623 PHLPP2Q6ZVD8 1323 aa13.65□□□□□ -0.22
CSMD1-205ENST00000519623 SLC16A4O15374 487 aa13.65□□□□□ -0.22
CSMD1-205ENST00000519623 MEFVO15553 781 aaPredicted RBP13.65□□□□□ -0.22
CSMD1-205ENST00000519623 PI15O43692 258 aa13.65□□□□□ -0.22
CSMD1-205ENST00000519623 HNRNPA1P09651 372 aaKnown RBP eCLIP13.65□□□□□ -0.22
CSMD1-205ENST00000519623 OR1D2P34982 312 aa13.65□□□□□ -0.22
CSMD1-205ENST00000519623 OSTNP61366 133 aa13.65□□□□□ -0.22
CSMD1-205ENST00000519623 RAB33AQ14088 237 aa13.65□□□□□ -0.22
CSMD1-205ENST00000519623 PDXDC1Q6P996 788 aa13.65□□□□□ -0.22
CSMD1-205ENST00000519623 KCTD17Q8N5Z5 321 aa13.65□□□□□ -0.22
CSMD1-205ENST00000519623 SYT2Q8N9I0 419 aaPredicted RBP13.65□□□□□ -0.22
CSMD1-205ENST00000519623 C3orf58Q8NDZ4 430 aa13.65□□□□□ -0.22
CSMD1-205ENST00000519623 SPIRE2Q8WWL2 714 aa13.65□□□□□ -0.22
CSMD1-205ENST00000519623 ATOH1Q92858 354 aaPredicted RBP13.65□□□□□ -0.22
CSMD1-205ENST00000519623 NXPE3Q969Y0 559 aa13.65□□□□□ -0.22
CSMD1-205ENST00000519623 ZBTB45Q96K62 511 aaPredicted RBP13.65□□□□□ -0.22
CSMD1-205ENST00000519623 UROC1Q96N76 676 aa13.65□□□□□ -0.22
CSMD1-205ENST00000519623 ZMAT2Q96NC0 199 aaKnown RBP13.65□□□□□ -0.22
CSMD1-205ENST00000519623 TIPINQ9BVW5 301 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms