RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 CNTN3Q9P232 1028 aa24■■□□□ 1.43
VEGFA-217ENST00000518538 PRRC2BQ5JSZ5 2229 aaKnown RBP23.99■■□□□ 1.43
VEGFA-217ENST00000518538 CSPG5O95196 566 aa23.99■■□□□ 1.43
VEGFA-217ENST00000518538 IRS1P35568 1242 aa23.99■■□□□ 1.43
VEGFA-217ENST00000518538 SNW1Q13573 536 aaKnown RBP23.99■■□□□ 1.43
VEGFA-217ENST00000518538 NAB2Q15742 525 aa23.99■■□□□ 1.43
VEGFA-217ENST00000518538 SLC10A6Q3KNW5 377 aa23.99■■□□□ 1.43
VEGFA-217ENST00000518538 GLRA4Q5JXX5 417 aa23.99■■□□□ 1.43
VEGFA-217ENST00000518538 PDE12Q6L8Q7 609 aaKnown RBP23.99■■□□□ 1.43
VEGFA-217ENST00000518538 KANK3Q6NY19 840 aa23.99■■□□□ 1.43
VEGFA-217ENST00000518538 DDX53Q86TM3 631 aaKnown RBP23.99■■□□□ 1.43
VEGFA-217ENST00000518538 ENGASEQ8NFI3 743 aa23.99■■□□□ 1.43
VEGFA-217ENST00000518538 PLEKHA5Q9HAU0 1116 aa23.99■■□□□ 1.43
VEGFA-217ENST00000518538 EXOC1Q9NV70 894 aa23.99■■□□□ 1.43
VEGFA-217ENST00000518538 MARCH5Q9NX47 278 aa23.99■■□□□ 1.43
VEGFA-217ENST00000518538 PRG3Q9Y2Y8 225 aaPredicted RBP23.99■■□□□ 1.43
VEGFA-217ENST00000518538 SMIM28A0A1B0GU29 152 aa23.98■■□□□ 1.43
VEGFA-217ENST00000518538 FSCN2O14926 492 aa23.98■■□□□ 1.43
VEGFA-217ENST00000518538 MEFVO15553 781 aaPredicted RBP23.98■■□□□ 1.43
VEGFA-217ENST00000518538 PRR29P0C7W0 189 aa23.98■■□□□ 1.43
VEGFA-217ENST00000518538 KCNE1P15382 129 aa23.98■■□□□ 1.43
VEGFA-217ENST00000518538 ADSSP30520 456 aa23.98■■□□□ 1.43
VEGFA-217ENST00000518538 TNFSF9P41273 254 aa23.98■■□□□ 1.43
VEGFA-217ENST00000518538 KMT5BQ4FZB7 885 aa23.98■■□□□ 1.43
VEGFA-217ENST00000518538 TCEAL5Q5H9L2 206 aa23.98■■□□□ 1.43
VEGFA-217ENST00000518538 ZNF507Q8TCN5 953 aa23.98■■□□□ 1.43
VEGFA-217ENST00000518538 POMGNT1Q8WZA1 660 aa23.98■■□□□ 1.43
VEGFA-217ENST00000518538 STK39Q9UEW8 545 aa23.98■■□□□ 1.43
VEGFA-217ENST00000518538 UBE4BO95155 1302 aa23.98■■□□□ 1.43
VEGFA-217ENST00000518538 CXCL8P10145 99 aa23.97■■□□□ 1.43
VEGFA-217ENST00000518538 ERVFC1P60507 584 aa23.97■■□□□ 1.43
VEGFA-217ENST00000518538 DPYDQ12882 1025 aa23.97■■□□□ 1.43
VEGFA-217ENST00000518538 PSMD2Q13200 908 aa23.97■■□□□ 1.43
VEGFA-217ENST00000518538 ATG2AQ2TAZ0 1938 aa23.97■■□□□ 1.43
VEGFA-217ENST00000518538 ZBTB41Q5SVQ8 909 aa23.97■■□□□ 1.43
VEGFA-217ENST00000518538 MICAL1Q8TDZ2 1067 aa23.97■■□□□ 1.43
VEGFA-217ENST00000518538 TCF25Q9BQ70 676 aa23.97■■□□□ 1.43
VEGFA-217ENST00000518538 COLEC11Q9BWP8 271 aa23.97■■□□□ 1.43
VEGFA-217ENST00000518538 RPF1Q9H9Y2 349 aaKnown RBP23.97■■□□□ 1.43
VEGFA-217ENST00000518538 SLC39A2Q9NP94 309 aa23.97■■□□□ 1.43
VEGFA-217ENST00000518538 SLC38A7Q9NVC3 462 aa23.97■■□□□ 1.43
VEGFA-217ENST00000518538 CPSF3Q9UKF6 684 aaKnown RBP23.97■■□□□ 1.43
VEGFA-217ENST00000518538 AGO2Q9UKV8 859 aaKnown RBP23.97■■□□□ 1.43
VEGFA-217ENST00000518538 TTC26A0AVF1 554 aa23.96■■□□□ 1.43
VEGFA-217ENST00000518538 CASTOR2A6NHX0 329 aa23.96■■□□□ 1.43
VEGFA-217ENST00000518538 RPN1P04843 607 aaKnown RBP23.96■■□□□ 1.43
VEGFA-217ENST00000518538 GARTP22102 1010 aa23.96■■□□□ 1.43
VEGFA-217ENST00000518538 ENOX2Q16206 610 aaKnown RBP23.96■■□□□ 1.43
VEGFA-217ENST00000518538 VPS52Q8N1B4 723 aa23.96■■□□□ 1.43
VEGFA-217ENST00000518538 SCFD1Q8WVM8 642 aa23.96■■□□□ 1.43
VEGFA-217ENST00000518538 PPP2R3CQ969Q6 453 aa23.96■■□□□ 1.43
VEGFA-217ENST00000518538 CCDC47Q96A33 483 aaKnown RBP23.96■■□□□ 1.43
VEGFA-217ENST00000518538 ZMAT2Q96NC0 199 aaKnown RBP23.96■■□□□ 1.43
VEGFA-217ENST00000518538 NGRNQ9NPE2 291 aaKnown RBP23.96■■□□□ 1.43
VEGFA-217ENST00000518538 ENTPD7Q9NQZ7 604 aa23.96■■□□□ 1.43
VEGFA-217ENST00000518538 GADD45BO75293 160 aaPredicted RBP23.95■■□□□ 1.42
VEGFA-217ENST00000518538 ADRB2P07550 413 aa23.95■■□□□ 1.42
VEGFA-217ENST00000518538 HOXD13P35453 343 aa23.95■■□□□ 1.42
VEGFA-217ENST00000518538 PPP2R3AQ06190 1150 aa23.95■■□□□ 1.42
VEGFA-217ENST00000518538 HSP90AA2PQ14568 343 aaPredicted RBP23.95■■□□□ 1.42
VEGFA-217ENST00000518538 SKIV2LQ15477 1246 aaKnown RBP23.95■■□□□ 1.42
VEGFA-217ENST00000518538 BMT2Q1RMZ1 405 aa23.95■■□□□ 1.42
VEGFA-217ENST00000518538 TMC7Q7Z402 723 aa23.95■■□□□ 1.42
VEGFA-217ENST00000518538 TIGD1Q96MW7 591 aa23.95■■□□□ 1.42
VEGFA-217ENST00000518538 UROC1Q96N76 676 aa23.95■■□□□ 1.42
VEGFA-217ENST00000518538 PAAF1Q9BRP4 392 aa23.95■■□□□ 1.42
VEGFA-217ENST00000518538 VN1R3Q9BXE9 311 aa23.95■■□□□ 1.42
VEGFA-217ENST00000518538 ZBP1Q9H171 429 aa23.95■■□□□ 1.42
VEGFA-217ENST00000518538 CACNG4Q9UBN1 327 aa23.95■■□□□ 1.42
VEGFA-217ENST00000518538 PCDHGC5Q9Y5F6 944 aa23.95■■□□□ 1.42
VEGFA-217ENST00000518538 F8W810 466 aa23.94■■□□□ 1.42
VEGFA-217ENST00000518538 ACOT2P49753 483 aa23.94■■□□□ 1.42
VEGFA-217ENST00000518538 POU5F1Q01860 360 aaKnown RBP23.94■■□□□ 1.42
VEGFA-217ENST00000518538 STK4Q13043 487 aa23.94■■□□□ 1.42
VEGFA-217ENST00000518538 BMS1Q14692 1282 aaKnown RBP23.94■■□□□ 1.42
VEGFA-217ENST00000518538 PLPP4Q5VZY2 271 aa23.94■■□□□ 1.42
VEGFA-217ENST00000518538 CD302Q8IX05 232 aa23.94■■□□□ 1.42
VEGFA-217ENST00000518538 KIAA0895Q8NCT3 520 aa23.94■■□□□ 1.42
VEGFA-217ENST00000518538 TSPAN18Q96SJ8 248 aa23.94■■□□□ 1.42
VEGFA-217ENST00000518538 ADAM28Q9UKQ2 775 aa23.94■■□□□ 1.42
VEGFA-217ENST00000518538 CITO14578 2027 aa23.94■■□□□ 1.42
VEGFA-217ENST00000518538 COL6A3P12111 3177 aa23.94■■□□□ 1.42
VEGFA-217ENST00000518538 KIAA0391O15091 583 aaKnown RBP23.93■■□□□ 1.42
VEGFA-217ENST00000518538 RHOBTB3O94955 611 aa23.93■■□□□ 1.42
VEGFA-217ENST00000518538 EFEMP2O95967 443 aa23.93■■□□□ 1.42
VEGFA-217ENST00000518538 CTSAP10619 480 aa23.93■■□□□ 1.42
VEGFA-217ENST00000518538 SOX4Q06945 474 aaPredicted RBP23.93■■□□□ 1.42
VEGFA-217ENST00000518538 SMC1AQ14683 1233 aaKnown RBP23.93■■□□□ 1.42
VEGFA-217ENST00000518538 KCNB1Q14721 858 aa23.93■■□□□ 1.42
VEGFA-217ENST00000518538 ARMCX5Q6P1M9 558 aa23.93■■□□□ 1.42
VEGFA-217ENST00000518538 CLEC17AQ6ZS10 378 aa23.93■■□□□ 1.42
VEGFA-217ENST00000518538 ADGRD2Q7Z7M1 963 aa23.93■■□□□ 1.42
VEGFA-217ENST00000518538 NELFCDQ8IXH7 590 aa23.93■■□□□ 1.42
VEGFA-217ENST00000518538 RNF168Q8IYW5 571 aaPredicted RBP23.93■■□□□ 1.42
VEGFA-217ENST00000518538 RABGGTAQ92696 567 aa23.93■■□□□ 1.42
VEGFA-217ENST00000518538 CBWD1Q9BRT8 395 aa23.93■■□□□ 1.42
VEGFA-217ENST00000518538 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.93■■□□□ 1.42
VEGFA-217ENST00000518538 LACTBL1A8MY62 500 aa23.92■■□□□ 1.42
VEGFA-217ENST00000518538 KIF4AO95239 1232 aa23.92■■□□□ 1.42
VEGFA-217ENST00000518538 LDHAP00338 332 aaKnown RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms