RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 KRT26Q7Z3Y9 468 aa5.49□□□□□ -1.53
LINC01088-211ENST00000515597 SIMC1Q8NDZ2 872 aa5.49□□□□□ -1.53
LINC01088-211ENST00000515597 FBXO18Q8NFZ0 1043 aa5.49□□□□□ -1.53
LINC01088-211ENST00000515597 ORAI2Q96SN7 254 aa5.49□□□□□ -1.53
LINC01088-211ENST00000515597 COX11Q9Y6N1 276 aa5.49□□□□□ -1.53
LINC01088-211ENST00000515597 WNT10BO00744 389 aa5.48□□□□□ -1.53
LINC01088-211ENST00000515597 EYA4O95677 639 aa5.48□□□□□ -1.53
LINC01088-211ENST00000515597 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.48□□□□□ -1.53
LINC01088-211ENST00000515597 ABHD17BQ5VST6 288 aa5.48□□□□□ -1.53
LINC01088-211ENST00000515597 PDZD4Q76G19 769 aaPredicted RBP5.48□□□□□ -1.53
LINC01088-211ENST00000515597 OR56A1Q8NGH5 318 aa5.48□□□□□ -1.53
LINC01088-211ENST00000515597 ZFP28Q8NHY6 868 aa5.48□□□□□ -1.53
LINC01088-211ENST00000515597 LMBR1Q8WVP7 490 aa5.48□□□□□ -1.53
LINC01088-211ENST00000515597 RAX2Q96IS3 184 aa5.48□□□□□ -1.53
LINC01088-211ENST00000515597 RNF181Q9P0P0 153 aa5.48□□□□□ -1.53
LINC01088-211ENST00000515597 INSL6Q9Y581 213 aa5.48□□□□□ -1.53
LINC01088-211ENST00000515597 DRGXA6NNA5 263 aa5.47□□□□□ -1.53
LINC01088-211ENST00000515597 CXorf49A8MYA2 514 aaPredicted RBP5.47□□□□□ -1.53
LINC01088-211ENST00000515597 CDKL5O76039 1030 aa5.47□□□□□ -1.53
LINC01088-211ENST00000515597 CLSTN1O94985 981 aa5.47□□□□□ -1.53
LINC01088-211ENST00000515597 GASTP01350 101 aa5.47□□□□□ -1.53
LINC01088-211ENST00000515597 CFIP05156 583 aa5.47□□□□□ -1.53
LINC01088-211ENST00000515597 EGR2P11161 476 aaPredicted RBP5.47□□□□□ -1.53
LINC01088-211ENST00000515597 CRHR1P34998 444 aa5.47□□□□□ -1.53
LINC01088-211ENST00000515597 PTPN7P35236 360 aa5.47□□□□□ -1.53
LINC01088-211ENST00000515597 FLT3LGP49771 235 aa5.47□□□□□ -1.53
LINC01088-211ENST00000515597 RAP2BP61225 183 aa5.47□□□□□ -1.53
LINC01088-211ENST00000515597 MRPS9P82933 396 aaKnown RBP5.47□□□□□ -1.53
LINC01088-211ENST00000515597 SCAPQ12770 1279 aa5.47□□□□□ -1.53
LINC01088-211ENST00000515597 STAT4Q14765 748 aa5.47□□□□□ -1.53
LINC01088-211ENST00000515597 ERCC6LQ2NKX8 1250 aa5.47□□□□□ -1.53
LINC01088-211ENST00000515597 MST1LQ2TV78 715 aa5.47□□□□□ -1.53
LINC01088-211ENST00000515597 ATXN7L2Q5T6C5 722 aaPredicted RBP5.47□□□□□ -1.53
LINC01088-211ENST00000515597 AGAP9Q5VTM2 703 aa5.47□□□□□ -1.53
LINC01088-211ENST00000515597 LRCH2Q5VUJ6 765 aa5.47□□□□□ -1.53
LINC01088-211ENST00000515597 TRMT2AQ8IZ69 625 aaKnown RBP5.47□□□□□ -1.53
LINC01088-211ENST00000515597 BOLLQ8N9W6 283 aaKnown RBP5.47□□□□□ -1.53
LINC01088-211ENST00000515597 ZSWIM1Q9BR11 485 aa5.47□□□□□ -1.53
LINC01088-211ENST00000515597 DPP7Q9UHL4 492 aa5.47□□□□□ -1.53
LINC01088-211ENST00000515597 ESRRBO95718 433 aa5.46□□□□□ -1.54
LINC01088-211ENST00000515597 ELANEP08246 267 aa5.46□□□□□ -1.54
LINC01088-211ENST00000515597 CPEP16870 476 aa5.46□□□□□ -1.54
LINC01088-211ENST00000515597 ADSLP30566 484 aaPredicted RBP5.46□□□□□ -1.54
LINC01088-211ENST00000515597 MPLP40238 635 aa5.46□□□□□ -1.54
LINC01088-211ENST00000515597 CCT2P78371 535 aaKnown RBP5.46□□□□□ -1.54
LINC01088-211ENST00000515597 FAPQ12884 760 aa5.46□□□□□ -1.54
LINC01088-211ENST00000515597 MPP3Q13368 585 aa5.46□□□□□ -1.54
LINC01088-211ENST00000515597 CT47A1Q5JQC4 288 aaPredicted RBP5.46□□□□□ -1.54
LINC01088-211ENST00000515597 TMX1Q9H3N1 280 aa5.46□□□□□ -1.54
LINC01088-211ENST00000515597 KLHL11Q9NVR0 708 aa5.46□□□□□ -1.54
LINC01088-211ENST00000515597 ATP11BQ9Y2G3 1177 aa5.46□□□□□ -1.54
LINC01088-211ENST00000515597 PRKAB1Q9Y478 270 aa5.46□□□□□ -1.54
LINC01088-211ENST00000515597 RPTORQ8N122 1335 aa5.46□□□□□ -1.54
LINC01088-211ENST00000515597 SALL3Q9BXA9 1300 aa5.46□□□□□ -1.54
LINC01088-211ENST00000515597 PHF2O75151 1096 aa5.45□□□□□ -1.54
LINC01088-211ENST00000515597 FDXRP22570 491 aa5.45□□□□□ -1.54
LINC01088-211ENST00000515597 CLRN1P58418 232 aa5.45□□□□□ -1.54
LINC01088-211ENST00000515597 BLOC1S1P78537 153 aa5.45□□□□□ -1.54
LINC01088-211ENST00000515597 MXRA7P84157 204 aa5.45□□□□□ -1.54
LINC01088-211ENST00000515597 TMPRSS15P98073 1019 aa5.45□□□□□ -1.54
LINC01088-211ENST00000515597 CDK17Q00537 523 aa5.45□□□□□ -1.54
LINC01088-211ENST00000515597 EGFLAMQ63HQ2 1017 aa5.45□□□□□ -1.54
LINC01088-211ENST00000515597 KCNK18Q7Z418 384 aa5.45□□□□□ -1.54
LINC01088-211ENST00000515597 GPR149Q86SP6 731 aa5.45□□□□□ -1.54
LINC01088-211ENST00000515597 MAPKAPK5Q8IW41 473 aa5.45□□□□□ -1.54
LINC01088-211ENST00000515597 RHOT2Q8IXI1 618 aa5.45□□□□□ -1.54
LINC01088-211ENST00000515597 CMIPQ8IY22 773 aa5.45□□□□□ -1.54
LINC01088-211ENST00000515597 FAM98AQ8NCA5 519 aaKnown RBP5.45□□□□□ -1.54
LINC01088-211ENST00000515597 TSPEARQ8WU66 669 aa5.45□□□□□ -1.54
LINC01088-211ENST00000515597 AUTS2Q8WXX7 1259 aa5.45□□□□□ -1.54
LINC01088-211ENST00000515597 ALG13Q9NP73 1137 aaKnown RBP5.45□□□□□ -1.54
LINC01088-211ENST00000515597 VTA1Q9NP79 307 aa5.45□□□□□ -1.54
LINC01088-211ENST00000515597 TESQ9UGI8 421 aaKnown RBP5.45□□□□□ -1.54
LINC01088-211ENST00000515597 SCOCQ9UIL1 159 aa5.45□□□□□ -1.54
LINC01088-211ENST00000515597 GOLGA8AA7E2F4 631 aa5.44□□□□□ -1.54
LINC01088-211ENST00000515597 PJA2O43164 708 aa5.44□□□□□ -1.54
LINC01088-211ENST00000515597 GPR39O43194 453 aa5.44□□□□□ -1.54
LINC01088-211ENST00000515597 AKR1B10O60218 316 aa5.44□□□□□ -1.54
LINC01088-211ENST00000515597 FOSP01100 380 aaPredicted RBP5.44□□□□□ -1.54
LINC01088-211ENST00000515597 MUM1Q2TAK8 710 aa5.44□□□□□ -1.54
LINC01088-211ENST00000515597 ANO4Q32M45 955 aa5.44□□□□□ -1.54
LINC01088-211ENST00000515597 FAM47AQ5JRC9 791 aa5.44□□□□□ -1.54
LINC01088-211ENST00000515597 GJC2Q5T442 439 aaPredicted RBP5.44□□□□□ -1.54
LINC01088-211ENST00000515597 TSHZ3Q63HK5 1081 aa5.44□□□□□ -1.54
LINC01088-211ENST00000515597 B3GNTL1Q67FW5 361 aaPredicted RBP5.44□□□□□ -1.54
LINC01088-211ENST00000515597 SP5Q6BEB4 398 aaPredicted RBP5.44□□□□□ -1.54
LINC01088-211ENST00000515597 LHFPL2Q6ZUX7 228 aa5.44□□□□□ -1.54
LINC01088-211ENST00000515597 MED25Q71SY5 747 aa5.44□□□□□ -1.54
LINC01088-211ENST00000515597 ZNF572Q7Z3I7 529 aaPredicted RBP5.44□□□□□ -1.54
LINC01088-211ENST00000515597 RIN2Q8WYP3 895 aaPredicted RBP5.44□□□□□ -1.54
LINC01088-211ENST00000515597 RNF31Q96EP0 1072 aa5.44□□□□□ -1.54
LINC01088-211ENST00000515597 Q96MF0 132 aa5.44□□□□□ -1.54
LINC01088-211ENST00000515597 LRFN3Q9BTN0 628 aa5.44□□□□□ -1.54
LINC01088-211ENST00000515597 ALOXE3Q9BYJ1 711 aa5.44□□□□□ -1.54
LINC01088-211ENST00000515597 TLK1Q9UKI8 766 aa5.44□□□□□ -1.54
LINC01088-211ENST00000515597 MAST3O60307 1309 aa5.44□□□□□ -1.54
LINC01088-211ENST00000515597 PNPLA7Q6ZV29 1317 aa5.44□□□□□ -1.54
LINC01088-211ENST00000515597 CCDC78A2IDD5 438 aa5.43□□□□□ -1.54
LINC01088-211ENST00000515597 MGST3O14880 152 aa5.43□□□□□ -1.54
LINC01088-211ENST00000515597 SNRPA1P09661 255 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms