RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 KCNH6Q9H252 994 aa6.33□□□□□ -1.4
SMARCA5-203ENST00000515531 CEP72Q9P209 647 aa6.33□□□□□ -1.4
SMARCA5-203ENST00000515531 LIMCH1Q9UPQ0 1083 aa6.33□□□□□ -1.4
SMARCA5-203ENST00000515531 ACTL7AQ9Y615 435 aa6.33□□□□□ -1.4
SMARCA5-203ENST00000515531 ATRNL1Q5VV63 1379 aa6.32□□□□□ -1.4
SMARCA5-203ENST00000515531 CCDC154A6NI56 674 aa6.32□□□□□ -1.4
SMARCA5-203ENST00000515531 HTRA2O43464 458 aaPredicted RBP6.32□□□□□ -1.4
SMARCA5-203ENST00000515531 FAM20BO75063 409 aa6.32□□□□□ -1.4
SMARCA5-203ENST00000515531 SCAF4O95104 1147 aaKnown RBP6.32□□□□□ -1.4
SMARCA5-203ENST00000515531 IL33O95760 270 aa6.32□□□□□ -1.4
SMARCA5-203ENST00000515531 CT47B1P0C2W7 299 aaPredicted RBP6.32□□□□□ -1.4
SMARCA5-203ENST00000515531 FPR1P21462 350 aa6.32□□□□□ -1.4
SMARCA5-203ENST00000515531 ALDH1A3P47895 512 aa6.32□□□□□ -1.4
SMARCA5-203ENST00000515531 CREMQ03060 361 aa6.32□□□□□ -1.4
SMARCA5-203ENST00000515531 TOB2Q14106 344 aaPredicted RBP6.32□□□□□ -1.4
SMARCA5-203ENST00000515531 MIIPQ5JXC2 388 aa6.32□□□□□ -1.4
SMARCA5-203ENST00000515531 CPA6Q8N4T0 437 aa6.32□□□□□ -1.4
SMARCA5-203ENST00000515531 CPT1CQ8TCG5 803 aa6.32□□□□□ -1.4
SMARCA5-203ENST00000515531 PHACTR3Q96KR7 559 aa6.32□□□□□ -1.4
SMARCA5-203ENST00000515531 DCLRE1CQ96SD1 692 aaKnown RBP6.32□□□□□ -1.4
SMARCA5-203ENST00000515531 ZNF747Q9BV97 191 aa6.32□□□□□ -1.4
SMARCA5-203ENST00000515531 RUVBL1Q9Y265 456 aaKnown RBP6.32□□□□□ -1.4
SMARCA5-203ENST00000515531 IPPQ9Y573 584 aa6.32□□□□□ -1.4
SMARCA5-203ENST00000515531 TRIM24O15164 1050 aa6.31□□□□□ -1.4
SMARCA5-203ENST00000515531 POMCP01189 267 aa6.31□□□□□ -1.4
SMARCA5-203ENST00000515531 PCSK1P29120 753 aa6.31□□□□□ -1.4
SMARCA5-203ENST00000515531 APOBEC3AP31941 199 aaPredicted RBP6.31□□□□□ -1.4
SMARCA5-203ENST00000515531 DGCR2P98153 550 aa6.31□□□□□ -1.4
SMARCA5-203ENST00000515531 CDC42EP1Q00587 391 aa6.31□□□□□ -1.4
SMARCA5-203ENST00000515531 NHLH2Q02577 135 aa6.31□□□□□ -1.4
SMARCA5-203ENST00000515531 IL10RAQ13651 578 aa6.31□□□□□ -1.4
SMARCA5-203ENST00000515531 TUBA3CQ13748 450 aa6.31□□□□□ -1.4
SMARCA5-203ENST00000515531 TTF1Q15361 905 aaPredicted RBP6.31□□□□□ -1.4
SMARCA5-203ENST00000515531 LSM12Q3MHD2 195 aaKnown RBP6.31□□□□□ -1.4
SMARCA5-203ENST00000515531 TMEM240Q5SV17 173 aa6.31□□□□□ -1.4
SMARCA5-203ENST00000515531 OTUD7BQ6GQQ9 843 aa6.31□□□□□ -1.4
SMARCA5-203ENST00000515531 TUBA3EQ6PEY2 450 aa6.31□□□□□ -1.4
SMARCA5-203ENST00000515531 DRC7Q8IY82 874 aa6.31□□□□□ -1.4
SMARCA5-203ENST00000515531 ANKRD13AQ8IZ07 590 aa6.31□□□□□ -1.4
SMARCA5-203ENST00000515531 HOOK2Q96ED9 719 aa6.31□□□□□ -1.4
SMARCA5-203ENST00000515531 HSPBAP1Q96EW2 488 aa6.31□□□□□ -1.4
SMARCA5-203ENST00000515531 TMX3Q96JJ7 454 aa6.31□□□□□ -1.4
SMARCA5-203ENST00000515531 IP6K2Q9UHH9 426 aa6.31□□□□□ -1.4
SMARCA5-203ENST00000515531 REXO2Q9Y3B8 237 aaKnown RBP6.31□□□□□ -1.4
SMARCA5-203ENST00000515531 PNPLA7Q6ZV29 1317 aa6.3□□□□□ -1.4
SMARCA5-203ENST00000515531 DRGXA6NNA5 263 aa6.3□□□□□ -1.4
SMARCA5-203ENST00000515531 DIRC3C9JPN6 131 aa6.3□□□□□ -1.4
SMARCA5-203ENST00000515531 WNT10BO00744 389 aa6.3□□□□□ -1.4
SMARCA5-203ENST00000515531 SGTAO43765 313 aa6.3□□□□□ -1.4
SMARCA5-203ENST00000515531 AMY1AP04745 511 aa6.3□□□□□ -1.4
SMARCA5-203ENST00000515531 VCAM1P19320 739 aa6.3□□□□□ -1.4
SMARCA5-203ENST00000515531 EDNRBP24530 442 aa6.3□□□□□ -1.4
SMARCA5-203ENST00000515531 MTM1Q13496 603 aa6.3□□□□□ -1.4
SMARCA5-203ENST00000515531 C3orf36Q3SXR2 165 aa6.3□□□□□ -1.4
SMARCA5-203ENST00000515531 ZNF529Q6P280 563 aa6.3□□□□□ -1.4
SMARCA5-203ENST00000515531 CMTR2Q8IYT2 770 aaKnown RBP6.3□□□□□ -1.4
SMARCA5-203ENST00000515531 ZGPATQ8N5A5 531 aaKnown RBP6.3□□□□□ -1.4
SMARCA5-203ENST00000515531 CACTINQ8WUQ7 758 aaKnown RBP6.3□□□□□ -1.4
SMARCA5-203ENST00000515531 RAB24Q969Q5 203 aa6.3□□□□□ -1.4
SMARCA5-203ENST00000515531 REXO4Q9GZR2 422 aaKnown RBP6.3□□□□□ -1.4
SMARCA5-203ENST00000515531 TRPM5Q9NZQ8 1165 aa6.3□□□□□ -1.4
SMARCA5-203ENST00000515531 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.3□□□□□ -1.4
SMARCA5-203ENST00000515531 SERPINB13Q9UIV8 391 aa6.3□□□□□ -1.4
SMARCA5-203ENST00000515531 E2F8A0AVK6 867 aa6.29□□□□□ -1.4
SMARCA5-203ENST00000515531 LEFTY2O00292 366 aa6.29□□□□□ -1.4
SMARCA5-203ENST00000515531 DTNBO60941 627 aa6.29□□□□□ -1.4
SMARCA5-203ENST00000515531 ZRANB2O95218 330 aaKnown RBP eCLIP6.29□□□□□ -1.4
SMARCA5-203ENST00000515531 PEX11BO96011 259 aa6.29□□□□□ -1.4
SMARCA5-203ENST00000515531 UBXN2BQ14CS0 331 aa6.29□□□□□ -1.4
SMARCA5-203ENST00000515531 CSRP2Q16527 193 aa6.29□□□□□ -1.4
SMARCA5-203ENST00000515531 CRIP3Q6Q6R5 217 aa6.29□□□□□ -1.4
SMARCA5-203ENST00000515531 USP51Q70EK9 711 aa6.29□□□□□ -1.4
SMARCA5-203ENST00000515531 MED25Q71SY5 747 aa6.29□□□□□ -1.4
SMARCA5-203ENST00000515531 GDF7Q7Z4P5 450 aa6.29□□□□□ -1.4
SMARCA5-203ENST00000515531 TTC7BQ86TV6 843 aa6.29□□□□□ -1.4
SMARCA5-203ENST00000515531 SYT12Q8IV01 421 aa6.29□□□□□ -1.4
SMARCA5-203ENST00000515531 ZNF276Q8N554 614 aa6.29□□□□□ -1.4
SMARCA5-203ENST00000515531 SLC25A43Q8WUT9 341 aaPredicted RBP6.29□□□□□ -1.4
SMARCA5-203ENST00000515531 CLPTM1LQ96KA5 538 aa6.29□□□□□ -1.4
SMARCA5-203ENST00000515531 ANKRD6Q9Y2G4 727 aa6.29□□□□□ -1.4
SMARCA5-203ENST00000515531 CFAP20Q9Y6A4 193 aaKnown RBP6.29□□□□□ -1.4
SMARCA5-203ENST00000515531 NPIPB8E9PQR5 432 aa6.28□□□□□ -1.4
SMARCA5-203ENST00000515531 FZD7O75084 574 aa6.28□□□□□ -1.4
SMARCA5-203ENST00000515531 SPATA31D3P0C874 917 aa6.28□□□□□ -1.4
SMARCA5-203ENST00000515531 ALAS1P13196 640 aa6.28□□□□□ -1.4
SMARCA5-203ENST00000515531 C6P13671 934 aa6.28□□□□□ -1.4
SMARCA5-203ENST00000515531 PDCP20941 246 aa6.28□□□□□ -1.4
SMARCA5-203ENST00000515531 TACR2P21452 398 aa6.28□□□□□ -1.4
SMARCA5-203ENST00000515531 PTGS2P35354 604 aa6.28□□□□□ -1.4
SMARCA5-203ENST00000515531 CHN2P52757 468 aa6.28□□□□□ -1.4
SMARCA5-203ENST00000515531 RNASE9P60153 205 aaKnown RBP6.28□□□□□ -1.4
SMARCA5-203ENST00000515531 CTXN1P60606 82 aa6.28□□□□□ -1.4
SMARCA5-203ENST00000515531 ZXDAP98168 799 aa6.28□□□□□ -1.4
SMARCA5-203ENST00000515531 ATP8B2P98198 1209 aa6.28□□□□□ -1.4
SMARCA5-203ENST00000515531 ODR4Q5SWX8 454 aa6.28□□□□□ -1.4
SMARCA5-203ENST00000515531 GADL1Q6ZQY3 521 aa6.28□□□□□ -1.4
SMARCA5-203ENST00000515531 SPATA31D4Q6ZUB0 917 aa6.28□□□□□ -1.4
SMARCA5-203ENST00000515531 SEM1Q6ZVN7 128 aa6.28□□□□□ -1.4
SMARCA5-203ENST00000515531 UBE3BQ7Z3V4 1068 aa6.28□□□□□ -1.4
SMARCA5-203ENST00000515531 PLXDC1Q8IUK5 500 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms