RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 FOXL1Q12952 345 aa6.6□□□□□ -1.35
HMGCS1-207ENST00000514610 NOGQ13253 232 aa6.6□□□□□ -1.35
HMGCS1-207ENST00000514610 SNAPC2Q13487 334 aa6.6□□□□□ -1.35
HMGCS1-207ENST00000514610 RAB39AQ14964 217 aa6.6□□□□□ -1.35
HMGCS1-207ENST00000514610 CSRP2Q16527 193 aa6.6□□□□□ -1.35
HMGCS1-207ENST00000514610 KHDC1Q4VXA5 237 aaKnown RBP6.6□□□□□ -1.35
HMGCS1-207ENST00000514610 PDZD4Q76G19 769 aaPredicted RBP6.6□□□□□ -1.35
HMGCS1-207ENST00000514610 XYLT1Q86Y38 959 aa6.6□□□□□ -1.35
HMGCS1-207ENST00000514610 PLBD2Q8NHP8 589 aa6.6□□□□□ -1.35
HMGCS1-207ENST00000514610 ARL8AQ96BM9 186 aa6.6□□□□□ -1.35
HMGCS1-207ENST00000514610 RBM15Q96T37 977 aaKnown RBP eCLIP6.6□□□□□ -1.354e-8■□□□□ 8.7
HMGCS1-207ENST00000514610 MYOCQ99972 504 aa6.6□□□□□ -1.35
HMGCS1-207ENST00000514610 LSM14BQ9BX40 385 aaKnown RBP6.6□□□□□ -1.35
HMGCS1-207ENST00000514610 PRDM11Q9NQV5 511 aa6.6□□□□□ -1.35
HMGCS1-207ENST00000514610 SLC23A1Q9UHI7 598 aa6.6□□□□□ -1.35
HMGCS1-207ENST00000514610 ZFR2Q9UPR6 939 aaKnown RBP6.6□□□□□ -1.35
HMGCS1-207ENST00000514610 SH3BP1Q9Y3L3 701 aa6.6□□□□□ -1.35
HMGCS1-207ENST00000514610 PCDHA3Q9Y5H8 950 aa6.6□□□□□ -1.35
HMGCS1-207ENST00000514610 SLC30A1Q9Y6M5 507 aa6.6□□□□□ -1.35
HMGCS1-207ENST00000514610 FRMPD2Q68DX3 1309 aaPredicted RBP6.59□□□□□ -1.35
HMGCS1-207ENST00000514610 MALP21145 153 aa6.59□□□□□ -1.35
HMGCS1-207ENST00000514610 HTR1BP28222 390 aa6.59□□□□□ -1.35
HMGCS1-207ENST00000514610 MSX2P35548 267 aaPredicted RBP6.59□□□□□ -1.35
HMGCS1-207ENST00000514610 CTXN1P60606 82 aa6.59□□□□□ -1.35
HMGCS1-207ENST00000514610 FKBP15Q5T1M5 1219 aa6.59□□□□□ -1.35
HMGCS1-207ENST00000514610 CIR1Q86X95 450 aaPredicted RBP6.59□□□□□ -1.35
HMGCS1-207ENST00000514610 COL23A1Q86Y22 540 aaPredicted RBP6.59□□□□□ -1.35
HMGCS1-207ENST00000514610 C3orf20Q8ND61 904 aa6.59□□□□□ -1.35
HMGCS1-207ENST00000514610 B3GNT5Q9BYG0 378 aa6.59□□□□□ -1.35
HMGCS1-207ENST00000514610 KMT5AQ9NQR1 393 aa6.59□□□□□ -1.35
HMGCS1-207ENST00000514610 CALCOCO1Q9P1Z2 691 aa6.59□□□□□ -1.35
HMGCS1-207ENST00000514610 STXBP5LQ9Y2K9 1186 aa6.59□□□□□ -1.35
HMGCS1-207ENST00000514610 PNPLA7Q6ZV29 1317 aa6.58□□□□□ -1.36
HMGCS1-207ENST00000514610 NT5C1B-RDH14C9J2C7 533 aa6.58□□□□□ -1.36
HMGCS1-207ENST00000514610 SLC16A6O15403 523 aa6.58□□□□□ -1.36
HMGCS1-207ENST00000514610 RPLP2P05387 115 aaKnown RBP6.58□□□□□ -1.36
HMGCS1-207ENST00000514610 RAP2AP10114 183 aa6.58□□□□□ -1.36
HMGCS1-207ENST00000514610 LLGL1Q15334 1064 aa6.58□□□□□ -1.36
HMGCS1-207ENST00000514610 FBLN7Q53RD9 439 aa6.58□□□□□ -1.36
HMGCS1-207ENST00000514610 OTUD7BQ6GQQ9 843 aa6.58□□□□□ -1.36
HMGCS1-207ENST00000514610 GADL1Q6ZQY3 521 aa6.58□□□□□ -1.36
HMGCS1-207ENST00000514610 CHST15Q7LFX5 561 aaPredicted RBP6.58□□□□□ -1.36
HMGCS1-207ENST00000514610 HEATR3Q7Z4Q2 680 aa6.58□□□□□ -1.36
HMGCS1-207ENST00000514610 PLXDC1Q8IUK5 500 aa6.58□□□□□ -1.36
HMGCS1-207ENST00000514610 KLHDC4Q8TBB5 520 aa6.58□□□□□ -1.36
HMGCS1-207ENST00000514610 CCDC136Q96JN2 1154 aa6.58□□□□□ -1.36
HMGCS1-207ENST00000514610 C20orf173Q96LM9 149 aa6.58□□□□□ -1.36
HMGCS1-207ENST00000514610 MRI1Q9BV20 369 aa6.58□□□□□ -1.36
HMGCS1-207ENST00000514610 CPEB1Q9BZB8 566 aaKnown RBP6.58□□□□□ -1.36
HMGCS1-207ENST00000514610 TMEM60Q9H2L4 133 aa6.58□□□□□ -1.36
HMGCS1-207ENST00000514610 RTEL1Q9NZ71 1219 aa6.58□□□□□ -1.36
HMGCS1-207ENST00000514610 MOCS1Q9NZB8 636 aa6.58□□□□□ -1.36
HMGCS1-207ENST00000514610 SBK3P0C264 359 aa6.57□□□□□ -1.36
HMGCS1-207ENST00000514610 NKX6-1P78426 367 aaPredicted RBP6.57□□□□□ -1.36
HMGCS1-207ENST00000514610 THEMIS2Q5TEJ8 643 aa6.57□□□□□ -1.36
HMGCS1-207ENST00000514610 SWSAP1Q6NVH7 229 aa6.57□□□□□ -1.36
HMGCS1-207ENST00000514610 SLC4A10Q6U841 1118 aa6.57□□□□□ -1.36
HMGCS1-207ENST00000514610 GLB1LQ6UWU2 654 aa6.57□□□□□ -1.36
HMGCS1-207ENST00000514610 GPRIN1Q7Z2K8 1008 aa6.57□□□□□ -1.36
HMGCS1-207ENST00000514610 ELOA2Q8IYF1 753 aaPredicted RBP6.57□□□□□ -1.36
HMGCS1-207ENST00000514610 KIAA0319LQ8IZA0 1049 aa6.57□□□□□ -1.36
HMGCS1-207ENST00000514610 KRTAP4-2Q9BYR5 136 aa6.57□□□□□ -1.36
HMGCS1-207ENST00000514610 EPC1Q9H2F5 836 aa6.57□□□□□ -1.36
HMGCS1-207ENST00000514610 LMBRD1Q9NUN5 540 aa6.57□□□□□ -1.36
HMGCS1-207ENST00000514610 HECAQ9UBI9 543 aaPredicted RBP6.57□□□□□ -1.36
HMGCS1-207ENST00000514610 POLHQ9Y253 713 aa6.57□□□□□ -1.36
HMGCS1-207ENST00000514610 PATE3B3GLJ2 98 aa6.56□□□□□ -1.36
HMGCS1-207ENST00000514610 ITGB3P05106 788 aa6.56□□□□□ -1.36
HMGCS1-207ENST00000514610 TYRP14679 529 aa6.56□□□□□ -1.36
HMGCS1-207ENST00000514610 IL12RB1P42701 662 aa6.56□□□□□ -1.36
HMGCS1-207ENST00000514610 AGFG1P52594 562 aaKnown RBP6.56□□□□□ -1.36
HMGCS1-207ENST00000514610 ELAVL1Q15717 326 aaKnown RBP6.56□□□□□ -1.36
HMGCS1-207ENST00000514610 SPTY2D1Q68D10 685 aaPredicted RBP6.56□□□□□ -1.36
HMGCS1-207ENST00000514610 NPNTQ6UXI9 565 aa6.56□□□□□ -1.36
HMGCS1-207ENST00000514610 Q6ZSN1 163 aa6.56□□□□□ -1.36
HMGCS1-207ENST00000514610 SEM1Q6ZVN7 128 aa6.56□□□□□ -1.36
HMGCS1-207ENST00000514610 TTLL10Q6ZVT0 673 aa6.56□□□□□ -1.36
HMGCS1-207ENST00000514610 DOK3Q7L591 496 aa6.56□□□□□ -1.36
HMGCS1-207ENST00000514610 APBB1IPQ7Z5R6 666 aaPredicted RBP6.56□□□□□ -1.36
HMGCS1-207ENST00000514610 D2HGDHQ8N465 521 aa6.56□□□□□ -1.36
HMGCS1-207ENST00000514610 DNERQ8NFT8 737 aa6.56□□□□□ -1.36
HMGCS1-207ENST00000514610 CDK5RAP3Q96JB5 506 aa6.56□□□□□ -1.36
HMGCS1-207ENST00000514610 WWC2-AS2Q96NR7 200 aa6.56□□□□□ -1.36
HMGCS1-207ENST00000514610 NT5C1BQ96P26 610 aa6.56□□□□□ -1.36
HMGCS1-207ENST00000514610 C11orf54Q9H0W9 315 aaPredicted RBP6.56□□□□□ -1.36
HMGCS1-207ENST00000514610 ABCF2Q9UG63 623 aa6.56□□□□□ -1.36
HMGCS1-207ENST00000514610 TBKBP1A7MCY6 615 aa6.55□□□□□ -1.36
HMGCS1-207ENST00000514610 B5MCH6 92 aa6.55□□□□□ -1.36
HMGCS1-207ENST00000514610 F2RL2O00254 374 aa6.55□□□□□ -1.36
HMGCS1-207ENST00000514610 TPP1O14773 563 aa6.55□□□□□ -1.36
HMGCS1-207ENST00000514610 GRM6O15303 877 aa6.55□□□□□ -1.36
HMGCS1-207ENST00000514610 PJA2O43164 708 aa6.55□□□□□ -1.36
HMGCS1-207ENST00000514610 TEX33O43247 280 aa6.55□□□□□ -1.36
HMGCS1-207ENST00000514610 CD1AP06126 327 aa6.55□□□□□ -1.36
HMGCS1-207ENST00000514610 ATP5JP18859 108 aa6.55□□□□□ -1.36
HMGCS1-207ENST00000514610 SLC6A4P31645 630 aa6.55□□□□□ -1.36
HMGCS1-207ENST00000514610 RAP2BP61225 183 aa6.55□□□□□ -1.36
HMGCS1-207ENST00000514610 RAB1AP62820 205 aa6.55□□□□□ -1.36
HMGCS1-207ENST00000514610 PLS1Q14651 629 aa6.55□□□□□ -1.36
HMGCS1-207ENST00000514610 ICAM4Q14773 271 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms