RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 TPP2P29144 1249 aaPredicted RBP13.93□□□□□ -0.18
TCOF1-213ENST00000514442 PSMD7P51665 324 aa13.93□□□□□ -0.18
TCOF1-213ENST00000514442 OLFML2BQ68BL8 750 aa13.93□□□□□ -0.18
TCOF1-213ENST00000514442 OPLAHO14841 1288 aa13.93□□□□□ -0.18
TCOF1-213ENST00000514442 TXNP10599 105 aaKnown RBP13.93□□□□□ -0.18
TCOF1-213ENST00000514442 ZNF211Q13398 564 aaPredicted RBP13.93□□□□□ -0.18
TCOF1-213ENST00000514442 GRAMD4Q6IC98 578 aa13.93□□□□□ -0.18
TCOF1-213ENST00000514442 TMEM139Q8IV31 216 aa13.93□□□□□ -0.18
TCOF1-213ENST00000514442 GLYCTKQ8IVS8 523 aa13.93□□□□□ -0.18
TCOF1-213ENST00000514442 HIC2Q96JB3 615 aa13.93□□□□□ -0.18
TCOF1-213ENST00000514442 SLC4A9Q96Q91 983 aa13.93□□□□□ -0.18
TCOF1-213ENST00000514442 ARHGAP10A1A4S6 786 aa13.93□□□□□ -0.18
TCOF1-213ENST00000514442 CDC25CP30307 473 aa13.93□□□□□ -0.18
TCOF1-213ENST00000514442 ARL4AP40617 200 aa13.93□□□□□ -0.18
TCOF1-213ENST00000514442 LCA5Q86VQ0 697 aa13.93□□□□□ -0.18
TCOF1-213ENST00000514442 ATG4CQ96DT6 458 aa13.93□□□□□ -0.18
TCOF1-213ENST00000514442 MAP3K14Q99558 947 aa13.93□□□□□ -0.18
TCOF1-213ENST00000514442 KIAA1586Q9HCI6 787 aa13.93□□□□□ -0.18
TCOF1-213ENST00000514442 INTS13Q9NVM9 706 aa13.93□□□□□ -0.18
TCOF1-213ENST00000514442 TTI1O43156 1089 aa13.92□□□□□ -0.18
TCOF1-213ENST00000514442 SLC37A4O43826 429 aa13.92□□□□□ -0.18
TCOF1-213ENST00000514442 UBOX5O94941 541 aa13.92□□□□□ -0.18
TCOF1-213ENST00000514442 NR3C2P08235 984 aa13.92□□□□□ -0.18
TCOF1-213ENST00000514442 CD44P16070 742 aaKnown RBP13.92□□□□□ -0.18
TCOF1-213ENST00000514442 ILDR1Q86SU0 546 aaPredicted RBP13.92□□□□□ -0.18
TCOF1-213ENST00000514442 SRRM1Q8IYB3 904 aaKnown RBP13.92□□□□□ -0.18
TCOF1-213ENST00000514442 C7orf25Q9BPX7 421 aa13.92□□□□□ -0.18
TCOF1-213ENST00000514442 EDEM3Q9BZQ6 932 aa13.92□□□□□ -0.18
TCOF1-213ENST00000514442 PFDN4Q9NQP4 134 aa13.92□□□□□ -0.18
TCOF1-213ENST00000514442 RBAKQ9NYW8 714 aaPredicted RBP13.92□□□□□ -0.18
TCOF1-213ENST00000514442 DUSP10Q9Y6W6 482 aa13.92□□□□□ -0.18
TCOF1-213ENST00000514442 TCRBV5S4A2TA0A5A2 114 aa13.92□□□□□ -0.18
TCOF1-213ENST00000514442 GGPS1O95749 300 aa13.92□□□□□ -0.18
TCOF1-213ENST00000514442 MYBL2P10244 700 aa13.92□□□□□ -0.18
TCOF1-213ENST00000514442 CA4P22748 312 aa13.92□□□□□ -0.18
TCOF1-213ENST00000514442 ZC2HC1CQ53FD0 456 aaPredicted RBP13.92□□□□□ -0.18
TCOF1-213ENST00000514442 KRT39Q6A163 491 aa13.92□□□□□ -0.18
TCOF1-213ENST00000514442 DDX42Q86XP3 938 aaKnown RBP eCLIP13.92□□□□□ -0.18
TCOF1-213ENST00000514442 CD302Q8IX05 232 aa13.92□□□□□ -0.18
TCOF1-213ENST00000514442 ARHGAP23Q9P227 1491 aa13.92□□□□□ -0.18
TCOF1-213ENST00000514442 MYOM1P52179 1685 aa13.92□□□□□ -0.18
TCOF1-213ENST00000514442 EXOC1LA0A1B0GW35 172 aa13.92□□□□□ -0.18
TCOF1-213ENST00000514442 SSU72P8A0A1W2PR75 194 aa13.92□□□□□ -0.18
TCOF1-213ENST00000514442 RASA4BC9J798 803 aa13.92□□□□□ -0.18
TCOF1-213ENST00000514442 RASA4O43374 803 aa13.92□□□□□ -0.18
TCOF1-213ENST00000514442 STAT5BP51692 787 aa13.92□□□□□ -0.18
TCOF1-213ENST00000514442 DHX34Q14147 1143 aaKnown RBP13.92□□□□□ -0.18
TCOF1-213ENST00000514442 KLHL23Q8NBE8 558 aa13.92□□□□□ -0.18
TCOF1-213ENST00000514442 RNF149Q8NC42 400 aa13.92□□□□□ -0.18
TCOF1-213ENST00000514442 SCYL1Q96KG9 808 aa13.92□□□□□ -0.18
TCOF1-213ENST00000514442 CARD9Q9H257 536 aa13.92□□□□□ -0.18
TCOF1-213ENST00000514442 AGO2Q9UKV8 859 aaKnown RBP13.92□□□□□ -0.18
TCOF1-213ENST00000514442 PITPNM2Q9BZ72 1349 aa13.92□□□□□ -0.18
TCOF1-213ENST00000514442 RHOBTB3O94955 611 aa13.92□□□□□ -0.18
TCOF1-213ENST00000514442 GLI1P08151 1106 aa13.92□□□□□ -0.18
TCOF1-213ENST00000514442 KPNB1Q14974 876 aaKnown RBP13.92□□□□□ -0.18
TCOF1-213ENST00000514442 KIAA1841Q6NSI8 718 aa13.92□□□□□ -0.18
TCOF1-213ENST00000514442 GPD1LQ8N335 351 aa13.92□□□□□ -0.18
TCOF1-213ENST00000514442 AGAP11Q8TF27 550 aa13.92□□□□□ -0.18
TCOF1-213ENST00000514442 TRIM55Q9BYV6 548 aa13.92□□□□□ -0.18
TCOF1-213ENST00000514442 MYO5BQ9ULV0 1848 aa13.91□□□□□ -0.18
TCOF1-213ENST00000514442 SH3BP5O60239 455 aa13.91□□□□□ -0.18
TCOF1-213ENST00000514442 UBTFL6P0CB48 400 aaPredicted RBP13.91□□□□□ -0.18
TCOF1-213ENST00000514442 TNFRSF8P28908 595 aa13.91□□□□□ -0.18
TCOF1-213ENST00000514442 NR1H3Q13133 447 aa13.91□□□□□ -0.18
TCOF1-213ENST00000514442 PPP6R3Q5H9R7 873 aaPredicted RBP13.91□□□□□ -0.18
TCOF1-213ENST00000514442 DAB2IPQ5VWQ8 1189 aa13.91□□□□□ -0.18
TCOF1-213ENST00000514442 FAM43BQ6ZT52 329 aaPredicted RBP13.91□□□□□ -0.18
TCOF1-213ENST00000514442 PIP4K2CQ8TBX8 421 aa13.91□□□□□ -0.18
TCOF1-213ENST00000514442 OPTNQ96CV9 577 aa13.91□□□□□ -0.18
TCOF1-213ENST00000514442 ERP27Q96DN0 273 aa13.91□□□□□ -0.18
TCOF1-213ENST00000514442 SH3GL2Q99962 352 aa13.91□□□□□ -0.18
TCOF1-213ENST00000514442 LACRTQ9GZZ8 138 aa13.91□□□□□ -0.18
TCOF1-213ENST00000514442 CAPN6Q9Y6Q1 641 aa13.91□□□□□ -0.18
TCOF1-213ENST00000514442 A0A0G2JND7 137 aa13.91□□□□□ -0.18
TCOF1-213ENST00000514442 SPDYE16A6NNV3 312 aaPredicted RBP13.91□□□□□ -0.18
TCOF1-213ENST00000514442 SERPINB3P29508 390 aa13.91□□□□□ -0.18
TCOF1-213ENST00000514442 GPC5P78333 572 aa13.91□□□□□ -0.18
TCOF1-213ENST00000514442 SPDYE2Q495Y8 402 aa13.91□□□□□ -0.18
TCOF1-213ENST00000514442 C4orf50Q6ZRC1 276 aa13.91□□□□□ -0.18
TCOF1-213ENST00000514442 FASTKD5Q7L8L6 764 aaKnown RBP13.91□□□□□ -0.18
TCOF1-213ENST00000514442 MORC4Q8TE76 937 aa13.91□□□□□ -0.18
TCOF1-213ENST00000514442 MRPL4Q9BYD3 311 aaKnown RBP13.91□□□□□ -0.18
TCOF1-213ENST00000514442 O00370 1275 aa13.91□□□□□ -0.18
TCOF1-213ENST00000514442 SLC4A1P02730 911 aa13.91□□□□□ -0.18
TCOF1-213ENST00000514442 INHBAP08476 426 aa13.91□□□□□ -0.18
TCOF1-213ENST00000514442 MYBL1P10243 752 aa13.91□□□□□ -0.18
TCOF1-213ENST00000514442 ANKRD20A2Q5SQ80 823 aa13.91□□□□□ -0.18
TCOF1-213ENST00000514442 ANKRD20A1Q5TYW2 823 aa13.91□□□□□ -0.18
TCOF1-213ENST00000514442 PPP1R2P3Q6NXS1 205 aa13.91□□□□□ -0.18
TCOF1-213ENST00000514442 FAM81AQ8TBF8 368 aa13.91□□□□□ -0.18
TCOF1-213ENST00000514442 AFG3L2Q9Y4W6 797 aa13.91□□□□□ -0.18
TCOF1-213ENST00000514442 SCINQ9Y6U3 715 aa13.91□□□□□ -0.18
TCOF1-213ENST00000514442 SHPRHQ149N8 1683 aa13.91□□□□□ -0.18
TCOF1-213ENST00000514442 DDTLA6NHG4 134 aaPredicted RBP13.91□□□□□ -0.18
TCOF1-213ENST00000514442 E7ENQ6 273 aa13.91□□□□□ -0.18
TCOF1-213ENST00000514442 PDXKO00764 312 aa13.91□□□□□ -0.18
TCOF1-213ENST00000514442 TRPA1O75762 1119 aa13.91□□□□□ -0.18
TCOF1-213ENST00000514442 FTLP02792 175 aaPredicted RBP13.91□□□□□ -0.18
TCOF1-213ENST00000514442 ARHGEF6Q15052 776 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms