RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 C19orf57Q0VDD7 668 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 PLD1Q13393 1074 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 KIF22Q14807 665 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 CNGA2Q16280 664 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 KRBOX4Q5JUW0 171 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 METTL2BQ6P1Q9 378 aaKnown RBP7.7□□□□□ -1.18
NIPBL-208ENST00000514335 GLYCTKQ8IVS8 523 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 OR7G1Q8NGA0 311 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 LILRB4Q8NHJ6 448 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 OTUD7AQ8TE49 926 aaPredicted RBP7.7□□□□□ -1.18
NIPBL-208ENST00000514335 ZNF570Q96NI8 536 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 HGH1Q9BTY7 390 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 C14orf93Q9H972 538 aaKnown RBP7.7□□□□□ -1.18
NIPBL-208ENST00000514335 DMAP1Q9NPF5 467 aaPredicted RBP7.7□□□□□ -1.18
NIPBL-208ENST00000514335 GLRX2Q9NS18 164 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 EPS15L1Q9UBC2 864 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 ANAPC5Q9UJX4 755 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 DAGLAQ9Y4D2 1042 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 SPATA31A1Q5TZJ5 1347 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 KIF24Q5T7B8 1368 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 CRB1P82279 1406 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 TYW5A2RUC4 315 aaKnown RBP7.7□□□□□ -1.18
NIPBL-208ENST00000514335 APOL1O14791 398 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 BIRC5O15392 142 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 CYP1A1P04798 512 aaPredicted RBP7.7□□□□□ -1.18
NIPBL-208ENST00000514335 ALOX5P09917 674 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 GBP1P32455 592 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 TRIM23P36406 574 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 CCT5P48643 541 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 EIF4A1P60842 406 aaKnown RBP7.7□□□□□ -1.18
NIPBL-208ENST00000514335 GPR85P60893 370 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 RACK1P63244 317 aaKnown RBP7.7□□□□□ -1.18
NIPBL-208ENST00000514335 CYTH1Q15438 398 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 TEAD4Q15561 434 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 SLC6A19Q695T7 634 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 CNSTQ6PJW8 725 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 SARM1Q6SZW1 724 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 IGF2-ASQ6U949 168 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 TTC5Q8N0Z6 440 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 ZBTB38Q8NAP3 1195 aaPredicted RBP7.7□□□□□ -1.18
NIPBL-208ENST00000514335 PLBD2Q8NHP8 589 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 METTL2AQ96IZ6 378 aaKnown RBP7.7□□□□□ -1.18
NIPBL-208ENST00000514335 PRICKLE1Q96MT3 831 aaPredicted RBP7.7□□□□□ -1.18
NIPBL-208ENST00000514335 TBC1D32Q96NH3 1257 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 BCL7BQ9BQE9 202 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 KLHL4Q9C0H6 718 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 TGIF2Q9GZN2 237 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 RAD21L1Q9H4I0 556 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 TRPC7Q9HCX4 862 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 BMP2KQ9NSY1 1161 aaPredicted RBP7.7□□□□□ -1.18
NIPBL-208ENST00000514335 SOX13Q9UN79 622 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 COG5Q9UP83 839 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 GIT1Q9Y2X7 761 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 PCDHB4Q9Y5E5 795 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 USP31Q70CQ4 1352 aa7.7□□□□□ -1.18
NIPBL-208ENST00000514335 PKD1L3Q7Z443 1732 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 CYP3A7-CYP3A51PA0A087WV96 503 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 SLC9B1P1A6NJY1 282 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 PPP1R3GB7ZBB8 358 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 F8W810 466 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 LINC01387J3KSC0 135 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 PRPF6O94906 941 aaKnown RBP7.69□□□□□ -1.18
NIPBL-208ENST00000514335 CYP3A7P24462 503 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 ADH7P40394 386 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 ERFP50548 548 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 LIPEQ05469 1076 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 WDR43Q15061 677 aaKnown RBP eCLIP7.69□□□□□ -1.18
NIPBL-208ENST00000514335 MYLK3Q32MK0 819 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 SPDYAQ5MJ70 313 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 ALKBH5Q6P6C2 394 aaKnown RBP7.69□□□□□ -1.18
NIPBL-208ENST00000514335 USP51Q70EK9 711 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 EBF2Q9HAK2 575 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 ABI2Q9NYB9 513 aaPredicted RBP7.69□□□□□ -1.18
NIPBL-208ENST00000514335 TSR3Q9UJK0 312 aaKnown RBP7.69□□□□□ -1.18
NIPBL-208ENST00000514335 NFAT5O94916 1531 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 SENP3-EIF4A1A0A087X0R7 540 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 SYCE3A1L190 88 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 ANKRD34BA5PLL1 514 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 FAM47E-STBD1D6RA91 191 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 LRRN2O75325 713 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 ALDH1A2O94788 518 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 KLHL2O95198 593 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 CUL2Q13617 745 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 SLC14A2Q15849 920 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 TMPRSS9Q7Z410 1059 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 MRPL10Q7Z7H8 261 aaKnown RBP7.69□□□□□ -1.18
NIPBL-208ENST00000514335 AKAP14Q86UN6 197 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 HCAR2Q8TDS4 363 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 KCTD13Q8WZ19 329 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 ANKS1AQ92625 1134 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 FAM89AQ96GI7 184 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 MPHOSPH8Q99549 860 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 UCKL1Q9NWZ5 548 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 AMACRQ9UHK6 382 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 ADGRE2Q9UHX3 823 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 DNAJC16Q9Y2G8 782 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 COL5A2P05997 1499 aaPredicted RBP7.69□□□□□ -1.18
NIPBL-208ENST00000514335 TUBGCP6Q96RT7 1819 aa7.69□□□□□ -1.18
NIPBL-208ENST00000514335 LRRD1A4D1F6 860 aa7.68□□□□□ -1.18
NIPBL-208ENST00000514335 C9IYK1 514 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms