RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 RABGGTAQ92696 567 aa10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 TIFAQ96CG3 184 aa10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 EEF2KMTQ96G04 330 aa10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 SNX27Q96L92 541 aa10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 FAM161BQ96MY7 647 aa10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 RPS6KC1Q96S38 1066 aa10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 FAM213AQ9BRX8 229 aa10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 C17orf80Q9BSJ5 609 aa10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 CCDC94Q9BW85 323 aaPredicted RBP10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 KCTD10Q9H3F6 313 aa10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 SEMA6BQ9H3T3 888 aa10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 TBC1D13Q9NVG8 400 aa10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 MSRAQ9UJ68 235 aa10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 INSL6Q9Y581 213 aa10.69□□□□□ -0.7
TOPBP1-209ENST00000513818 F8W810 466 aa10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 PTGESO14684 152 aa10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 HOXA2O43364 376 aa10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 ZC3H11AO75152 810 aaKnown RBP eCLIP10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 DDHD2O94830 711 aa10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 LINC00271P0C7V0 271 aa10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 GUCY2FP51841 1108 aa10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 STX17P56962 302 aa10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 NFKBIBQ15653 356 aa10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 RAB30Q15771 203 aa10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 SLC10A6Q3KNW5 377 aa10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 DPCR1Q3MIW9 517 aa10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 CCDC183Q5T5S1 534 aa10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 CRELD2Q6UXH1 353 aaPredicted RBP10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 HS2ST1Q7LGA3 356 aa10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 APBB1IPQ7Z5R6 666 aaPredicted RBP10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 ZNF280BQ86YH2 543 aa10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 CBWD2Q8IUF1 395 aa10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 GUF1Q8N442 669 aaKnown RBP10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 FIBCD1Q8N539 461 aa10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 GSTCDQ8NEC7 633 aa10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 URGCPQ8TCY9 931 aa10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 ARNTL2Q8WYA1 636 aa10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 ZMAT2Q96NC0 199 aaKnown RBP10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 ACAP3Q96P50 834 aa10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 GOLGA2P5Q9HBQ8 144 aa10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 TYW1Q9NV66 732 aaKnown RBP10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 HSPBP1Q9NZL4 362 aa10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 DNAJB4Q9UDY4 337 aa10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 TUBGCP4Q9UGJ1 667 aa10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 CPSF3Q9UKF6 684 aaKnown RBP10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 GIT1Q9Y2X7 761 aa10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 STYXL1Q9Y6J8 313 aa10.68□□□□□ -0.7
TOPBP1-209ENST00000513818 EPOPA6NHQ4 379 aa10.67□□□□□ -0.7
TOPBP1-209ENST00000513818 CASTOR2A6NHX0 329 aa10.67□□□□□ -0.7
TOPBP1-209ENST00000513818 PPP1R3GB7ZBB8 358 aa10.67□□□□□ -0.7
TOPBP1-209ENST00000513818 NT5C1B-RDH14C9J2C7 533 aa10.67□□□□□ -0.7
TOPBP1-209ENST00000513818 RFXAPO00287 272 aa10.67□□□□□ -0.7
TOPBP1-209ENST00000513818 NR3C1P04150 777 aa10.67□□□□□ -0.7
TOPBP1-209ENST00000513818 NFICP08651 508 aa10.67□□□□□ -0.7
TOPBP1-209ENST00000513818 GARTP22102 1010 aa10.67□□□□□ -0.7
TOPBP1-209ENST00000513818 CTNNB1P35222 781 aa10.67□□□□□ -0.7
TOPBP1-209ENST00000513818 CASP4P49662 377 aa10.67□□□□□ -0.7
TOPBP1-209ENST00000513818 YARSP54577 528 aaKnown RBP10.67□□□□□ -0.7
TOPBP1-209ENST00000513818 RNASELQ05823 741 aaKnown RBP10.67□□□□□ -0.7
TOPBP1-209ENST00000513818 LMBRD2Q68DH5 695 aaPredicted RBP10.67□□□□□ -0.7
TOPBP1-209ENST00000513818 SLFN12LQ6IEE8 588 aa10.67□□□□□ -0.7
TOPBP1-209ENST00000513818 Q7L0L9 218 aa10.67□□□□□ -0.7
TOPBP1-209ENST00000513818 TMEM173Q86WV6 379 aaPredicted RBP10.67□□□□□ -0.7
TOPBP1-209ENST00000513818 ADSSL1Q8N142 457 aa10.67□□□□□ -0.7
TOPBP1-209ENST00000513818 GPD1LQ8N335 351 aa10.67□□□□□ -0.7
TOPBP1-209ENST00000513818 RDH13Q8NBN7 331 aa10.67□□□□□ -0.7
TOPBP1-209ENST00000513818 C18orf25Q96B23 403 aaPredicted RBP10.67□□□□□ -0.7
TOPBP1-209ENST00000513818 PAAF1Q9BRP4 392 aa10.67□□□□□ -0.7
TOPBP1-209ENST00000513818 TTYH1Q9H313 450 aaPredicted RBP10.67□□□□□ -0.7
TOPBP1-209ENST00000513818 CWH43Q9H720 699 aa10.67□□□□□ -0.7
TOPBP1-209ENST00000513818 NRDE2Q9H7Z3 1164 aa10.67□□□□□ -0.7
TOPBP1-209ENST00000513818 RPF1Q9H9Y2 349 aaKnown RBP10.67□□□□□ -0.7
TOPBP1-209ENST00000513818 RBAKQ9NYW8 714 aaPredicted RBP10.67□□□□□ -0.7
TOPBP1-209ENST00000513818 PRG3Q9Y2Y8 225 aaPredicted RBP10.67□□□□□ -0.7
TOPBP1-209ENST00000513818 PLXNA4Q9HCM2 1894 aa10.67□□□□□ -0.7
TOPBP1-209ENST00000513818 LACTBL1A8MY62 500 aa10.66□□□□□ -0.7
TOPBP1-209ENST00000513818 EXTL3O43909 919 aa10.66□□□□□ -0.7
TOPBP1-209ENST00000513818 CLTAP09496 248 aa10.66□□□□□ -0.7
TOPBP1-209ENST00000513818 PYGBP11216 843 aa10.66□□□□□ -0.7
TOPBP1-209ENST00000513818 IGFBP6P24592 240 aaPredicted RBP10.66□□□□□ -0.7
TOPBP1-209ENST00000513818 SLC11A1P49279 550 aa10.66□□□□□ -0.7
TOPBP1-209ENST00000513818 FXR1P51114 621 aaKnown RBP eCLIP10.66□□□□□ -0.7
TOPBP1-209ENST00000513818 PPP2R3AQ06190 1150 aa10.66□□□□□ -0.7
TOPBP1-209ENST00000513818 SOX4Q06945 474 aaPredicted RBP10.66□□□□□ -0.7
TOPBP1-209ENST00000513818 GRIK3Q13003 919 aa10.66□□□□□ -0.7
TOPBP1-209ENST00000513818 ZCWPW2Q504Y3 356 aa10.66□□□□□ -0.7
TOPBP1-209ENST00000513818 CEP135Q66GS9 1140 aa10.66□□□□□ -0.7
TOPBP1-209ENST00000513818 JADE1Q6IE81 842 aa10.66□□□□□ -0.7
TOPBP1-209ENST00000513818 RBM43Q6ZSC3 357 aaKnown RBP10.66□□□□□ -0.7
TOPBP1-209ENST00000513818 BRSK2Q8IWQ3 736 aa10.66□□□□□ -0.7
TOPBP1-209ENST00000513818 EFCAB13Q8IY85 973 aa10.66□□□□□ -0.7
TOPBP1-209ENST00000513818 HASPINQ8TF76 798 aa10.66□□□□□ -0.7
TOPBP1-209ENST00000513818 GDPD5Q8WTR4 605 aa10.66□□□□□ -0.7
TOPBP1-209ENST00000513818 BCL7CQ8WUZ0 217 aaPredicted RBP10.66□□□□□ -0.7
TOPBP1-209ENST00000513818 NELFBQ8WX92 580 aa10.66□□□□□ -0.7
TOPBP1-209ENST00000513818 P2RX5Q93086 422 aa10.66□□□□□ -0.7
TOPBP1-209ENST00000513818 MRPL9Q9BYD2 267 aaKnown RBP10.66□□□□□ -0.7
TOPBP1-209ENST00000513818 SLC28A3Q9HAS3 691 aa10.66□□□□□ -0.7
TOPBP1-209ENST00000513818 TOPORSQ9NS56 1045 aaPredicted RBP10.66□□□□□ -0.7
TOPBP1-209ENST00000513818 ATG2AQ2TAZ0 1938 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms