RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 ANKRD36BP1Q96IX9 119 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 NUDT12Q9BQG2 462 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 TSPYL2Q9H2G4 693 aaPredicted RBP8.22□□□□□ -1.09
CLCN3-209ENST00000513761 SIK3Q9Y2K2 1263 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 TECPR2O15040 1411 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.22□□□□□ -1.09
CLCN3-209ENST00000513761 KDM6AO15550 1401 aaPredicted RBP8.22□□□□□ -1.09
CLCN3-209ENST00000513761 RARGP13631 454 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 ELF3P78545 371 aaPredicted RBP8.22□□□□□ -1.09
CLCN3-209ENST00000513761 GPSM2P81274 684 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 C7orf31Q8N865 590 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 RUSC1Q9BVN2 902 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 VPS11Q9H270 941 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 ABCF3Q9NUQ8 709 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 SLC9A2Q9UBY0 812 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 IP6K2Q9UHH9 426 aa8.22□□□□□ -1.09
CLCN3-209ENST00000513761 RALAP11233 206 aa8.21□□□□□ -1.09
CLCN3-209ENST00000513761 MIIPQ5JXC2 388 aa8.21□□□□□ -1.09
CLCN3-209ENST00000513761 SPOPLQ6IQ16 392 aa8.21□□□□□ -1.09
CLCN3-209ENST00000513761 NAF1Q96HR8 494 aaKnown RBP8.21□□□□□ -1.09
CLCN3-209ENST00000513761 SERPINI1Q99574 410 aa8.21□□□□□ -1.09
CLCN3-209ENST00000513761 OSBPL8Q9BZF1 889 aa8.21□□□□□ -1.09
CLCN3-209ENST00000513761 TRAF3IP3Q9Y228 551 aa8.21□□□□□ -1.09
CLCN3-209ENST00000513761 DIP2BQ9P265 1576 aa8.21□□□□□ -1.09
CLCN3-209ENST00000513761 B2RBV5 119 aa8.21□□□□□ -1.09
CLCN3-209ENST00000513761 H3BRJ5 948 aa8.21□□□□□ -1.09
CLCN3-209ENST00000513761 PJA2O43164 708 aa8.21□□□□□ -1.09
CLCN3-209ENST00000513761 KCNQ2O43526 872 aa8.21□□□□□ -1.09
CLCN3-209ENST00000513761 SRGAP2CP0DJJ0 459 aa8.21□□□□□ -1.09
CLCN3-209ENST00000513761 MRPS9P82933 396 aaKnown RBP8.21□□□□□ -1.09
CLCN3-209ENST00000513761 PPP1R2P3Q6NXS1 205 aa8.21□□□□□ -1.09
CLCN3-209ENST00000513761 C16orf86Q6ZW13 317 aa8.21□□□□□ -1.09
CLCN3-209ENST00000513761 FBXO33Q7Z6M2 555 aa8.21□□□□□ -1.09
CLCN3-209ENST00000513761 SESTD1Q86VW0 696 aa8.21□□□□□ -1.09
CLCN3-209ENST00000513761 KLC2Q9H0B6 622 aa8.21□□□□□ -1.09
CLCN3-209ENST00000513761 PSMC3IPQ9P2W1 217 aaPredicted RBP8.21□□□□□ -1.09
CLCN3-209ENST00000513761 PREX1Q8TCU6 1659 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 DNAJC6O75061 913 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 CAMTA2O94983 1202 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 NTSR2O95665 410 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 GHRP10912 638 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 CRKP46108 304 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 QARSP47897 775 aaKnown RBP8.21□□□□□ -1.1
CLCN3-209ENST00000513761 ALDH5A1P51649 535 aaPredicted RBP8.21□□□□□ -1.1
CLCN3-209ENST00000513761 THOC5Q13769 683 aaKnown RBP8.21□□□□□ -1.1
CLCN3-209ENST00000513761 PREPLQ4J6C6 727 aaPredicted RBP8.21□□□□□ -1.1
CLCN3-209ENST00000513761 CC2D2BQ6DHV5 1058 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 SYDE1Q6ZW31 735 aaPredicted RBP8.21□□□□□ -1.1
CLCN3-209ENST00000513761 CYFIP1Q7L576 1253 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 HEXIM2Q96MH2 286 aaKnown RBP8.21□□□□□ -1.1
CLCN3-209ENST00000513761 ACAP3Q96P50 834 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 PPP1R16BQ96T49 567 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 C15orf41Q9Y2V0 281 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 TMEM131LA2VDJ0 1609 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 P4HBP07237 508 aaKnown RBP8.21□□□□□ -1.1
CLCN3-209ENST00000513761 RPA1P27694 616 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 PTENP60484 403 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 CCDC125Q86Z20 511 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 THNSL1Q8IYQ7 743 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 ICA1LQ8NDH6 482 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 ADPGKQ9BRR6 497 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 PI4K2AQ9BTU6 479 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 MIS12Q9H081 205 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 RANBP17Q9H2T7 1088 aaKnown RBP8.21□□□□□ -1.1
CLCN3-209ENST00000513761 ZFATQ9P243 1243 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 TLK1Q9UKI8 766 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 ASAP2O43150 1006 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 SHBGP04278 402 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 ZCCHC18P0CG32 403 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 CUL3Q13618 768 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 JADE1Q6IE81 842 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 TTC13Q8NBP0 860 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 SPATA20Q8TB22 786 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 ATP8B4Q8TF62 1192 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 SLC20A1Q8WUM9 679 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 TMEM237Q96Q45 408 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 NRBP2Q9NSY0 501 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 INPP5FQ9Y2H2 1132 aa8.21□□□□□ -1.1
CLCN3-209ENST00000513761 MED7O43513 233 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 KLRC4O43908 158 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 SGPL1O95470 568 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 KRT4P19013 534 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 HIC1Q14526 733 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 C3orf62Q6ZUJ4 267 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 ACSF2Q96CM8 615 aaPredicted RBP8.2□□□□□ -1.1
CLCN3-209ENST00000513761 PNMA5Q96PV4 448 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 TDRD3Q9H7E2 651 aaKnown RBP8.2□□□□□ -1.1
CLCN3-209ENST00000513761 AIPL1Q9NZN9 384 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 TNS3Q68CZ2 1445 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 PPP1R12AO14974 1030 aaPredicted RBP8.2□□□□□ -1.1
CLCN3-209ENST00000513761 VHLP40337 213 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 SLC1A1P43005 524 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 RPL21P46778 160 aaKnown RBP8.2□□□□□ -1.1
CLCN3-209ENST00000513761 C1orf228Q6PIY5 440 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 IRF2BP1Q8IU81 584 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 CXorf38Q8TB03 319 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 OLFM3Q96PB7 478 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 COA1Q9GZY4 146 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 NARFQ9UHQ1 456 aa8.2□□□□□ -1.1
CLCN3-209ENST00000513761 CHMP2BQ9UQN3 213 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms