RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 FBXL6Q8N531 539 aa8.02□□□□□ -1.13
HTT-212ENST00000513639 SYT2Q8N9I0 419 aaPredicted RBP8.02□□□□□ -1.13
HTT-212ENST00000513639 TDRD5Q8NAT2 981 aaKnown RBP8.02□□□□□ -1.13
HTT-212ENST00000513639 KREMEN2Q8NCW0 462 aa8.02□□□□□ -1.13
HTT-212ENST00000513639 SPIRE2Q8WWL2 714 aa8.02□□□□□ -1.13
HTT-212ENST00000513639 RIN2Q8WYP3 895 aaPredicted RBP8.02□□□□□ -1.13
HTT-212ENST00000513639 BSNDQ8WZ55 320 aa8.02□□□□□ -1.13
HTT-212ENST00000513639 NXPE3Q969Y0 559 aa8.02□□□□□ -1.13
HTT-212ENST00000513639 CALML4Q96GE6 196 aa8.02□□□□□ -1.13
HTT-212ENST00000513639 ACO2Q99798 780 aaKnown RBP8.02□□□□□ -1.13
HTT-212ENST00000513639 CCDC94Q9BW85 323 aaPredicted RBP8.02□□□□□ -1.13
HTT-212ENST00000513639 GPR62Q9BZJ7 368 aa8.02□□□□□ -1.13
HTT-212ENST00000513639 POMKQ9H5K3 350 aa8.02□□□□□ -1.13
HTT-212ENST00000513639 SLC38A7Q9NVC3 462 aa8.02□□□□□ -1.13
HTT-212ENST00000513639 MARCH5Q9NX47 278 aa8.02□□□□□ -1.13
HTT-212ENST00000513639 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.02□□□□□ -1.13
HTT-212ENST00000513639 LARSQ9P2J5 1176 aaKnown RBP8.02□□□□□ -1.13
HTT-212ENST00000513639 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.02□□□□□ -1.13
HTT-212ENST00000513639 WDFY4Q6ZS81 3184 aa8.02□□□□□ -1.13
HTT-212ENST00000513639 VWA3AA6NCI4 1184 aa8.01□□□□□ -1.13
HTT-212ENST00000513639 TTLL13PA6NNM8 815 aa8.01□□□□□ -1.13
HTT-212ENST00000513639 C2CD4DB7Z1M9 353 aa8.01□□□□□ -1.13
HTT-212ENST00000513639 RECQL4O94761 1208 aa8.01□□□□□ -1.13
HTT-212ENST00000513639 B3GAT3O94766 335 aa8.01□□□□□ -1.13
HTT-212ENST00000513639 WEE2P0C1S8 567 aa8.01□□□□□ -1.13
HTT-212ENST00000513639 MCF2P10911 925 aa8.01□□□□□ -1.13
HTT-212ENST00000513639 PLS3P13797 630 aa8.01□□□□□ -1.13
HTT-212ENST00000513639 CD44P16070 742 aaKnown RBP8.01□□□□□ -1.13
HTT-212ENST00000513639 CDC25AP30304 524 aa8.01□□□□□ -1.13
HTT-212ENST00000513639 RPL9P32969 192 aaKnown RBP8.01□□□□□ -1.13
HTT-212ENST00000513639 ABCD1P33897 745 aa8.01□□□□□ -1.13
HTT-212ENST00000513639 KYAT1Q16773 422 aa8.01□□□□□ -1.13
HTT-212ENST00000513639 UVSSAQ2YD98 709 aa8.01□□□□□ -1.13
HTT-212ENST00000513639 FAM171A1Q5VUB5 890 aa8.01□□□□□ -1.13
HTT-212ENST00000513639 LILRA6Q6PI73 481 aa8.01□□□□□ -1.13
HTT-212ENST00000513639 ALKAL1Q6UXT8 129 aa8.01□□□□□ -1.13
HTT-212ENST00000513639 CEP57Q86XR8 500 aa8.01□□□□□ -1.13
HTT-212ENST00000513639 TBC1D32Q96NH3 1257 aa8.01□□□□□ -1.13
HTT-212ENST00000513639 ACAP3Q96P50 834 aa8.01□□□□□ -1.13
HTT-212ENST00000513639 MMTAG2Q9BU76 263 aaKnown RBP8.01□□□□□ -1.13
HTT-212ENST00000513639 PIDD1Q9HB75 910 aa8.01□□□□□ -1.13
HTT-212ENST00000513639 POLD4Q9HCU8 107 aa8.01□□□□□ -1.13
HTT-212ENST00000513639 PTPRHQ9HD43 1115 aa8.01□□□□□ -1.13
HTT-212ENST00000513639 WDR6Q9NNW5 1121 aaKnown RBP8.01□□□□□ -1.13
HTT-212ENST00000513639 MAN1C1Q9NR34 630 aa8.01□□□□□ -1.13
HTT-212ENST00000513639 ZDHHC7Q9NXF8 308 aa8.01□□□□□ -1.13
HTT-212ENST00000513639 IGSF9Q9P2J2 1179 aa8.01□□□□□ -1.13
HTT-212ENST00000513639 ARHGAP28Q9P2N2 729 aa8.01□□□□□ -1.13
HTT-212ENST00000513639 GDAQ9Y2T3 454 aa8.01□□□□□ -1.13
HTT-212ENST00000513639 ZFP37Q9Y6Q3 630 aaPredicted RBP8.01□□□□□ -1.13
HTT-212ENST00000513639 CACNA1HO95180 2353 aa8.01□□□□□ -1.13
HTT-212ENST00000513639 PLXNA4Q9HCM2 1894 aa8□□□□□ -1.13
HTT-212ENST00000513639 SMIM28A0A1B0GU29 152 aa8□□□□□ -1.13
HTT-212ENST00000513639 CASTOR2A6NHX0 329 aa8□□□□□ -1.13
HTT-212ENST00000513639 PP2D1A8MPX8 630 aa8□□□□□ -1.13
HTT-212ENST00000513639 TMEM189-UBE2V1I3L0A0 370 aa8□□□□□ -1.13
HTT-212ENST00000513639 PTGESO14684 152 aa8□□□□□ -1.13
HTT-212ENST00000513639 CLDN3O15551 220 aa8□□□□□ -1.13
HTT-212ENST00000513639 TGM5O43548 720 aa8□□□□□ -1.13
HTT-212ENST00000513639 TOM1L1O75674 476 aa8□□□□□ -1.13
HTT-212ENST00000513639 PAPLNO95428 1278 aa8□□□□□ -1.13
HTT-212ENST00000513639 HNRNPA1P09651 372 aaKnown RBP eCLIP8□□□□□ -1.13
HTT-212ENST00000513639 PLA2G4BP0C869 781 aa8□□□□□ -1.13
HTT-212ENST00000513639 SPATA31D3P0C874 917 aa8□□□□□ -1.13
HTT-212ENST00000513639 SP100P23497 879 aaPredicted RBP8□□□□□ -1.13
HTT-212ENST00000513639 LONP1P36776 959 aaKnown RBP8□□□□□ -1.13
HTT-212ENST00000513639 GRM5P41594 1212 aa8□□□□□ -1.13
HTT-212ENST00000513639 TDGQ13569 410 aa8□□□□□ -1.13
HTT-212ENST00000513639 KANK3Q6NY19 840 aa8□□□□□ -1.13
HTT-212ENST00000513639 MPZL3Q6UWV2 235 aa8□□□□□ -1.13
HTT-212ENST00000513639 ZPBP2Q6X784 338 aa8□□□□□ -1.13
HTT-212ENST00000513639 PDZRN4Q6ZMN7 1036 aaPredicted RBP8□□□□□ -1.13
HTT-212ENST00000513639 SPATA31D4Q6ZUB0 917 aa8□□□□□ -1.13
HTT-212ENST00000513639 LNX1Q8TBB1 728 aaPredicted RBP8□□□□□ -1.13
HTT-212ENST00000513639 PIK3R5Q8WYR1 880 aa8□□□□□ -1.13
HTT-212ENST00000513639 SMG7Q92540 1137 aaKnown RBP8□□□□□ -1.13
HTT-212ENST00000513639 TSPAN18Q96SJ8 248 aa8□□□□□ -1.13
HTT-212ENST00000513639 KIFC3Q9BVG8 833 aa8□□□□□ -1.13
HTT-212ENST00000513639 PRKD2Q9BZL6 878 aa8□□□□□ -1.13
HTT-212ENST00000513639 PLEKHA5Q9HAU0 1116 aa8□□□□□ -1.13
HTT-212ENST00000513639 TECTAO75443 2155 aa8□□□□□ -1.13
HTT-212ENST00000513639 KIAA1671Q9BY89 1806 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 SFI1A8K8P3 1242 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 F8W810 466 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 SLC16A4O15374 487 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 MAP3K13O43283 966 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 XYLBO75191 536 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 ZMYND10O75800 440 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 BRD1O95696 1058 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 KCNE1P15382 129 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 AVPR2P30518 371 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 DDIT3P35638 169 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 PTPN5P54829 565 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 SLC12A3P55017 1021 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 RAB33AQ14088 237 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 NAB2Q15742 525 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 PSMD5Q16401 504 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 UPP1Q16831 310 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 ZNF568Q3ZCX4 644 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 XKR4Q5GH76 650 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms