RNA–Protein interactions for RNA: ENST00000512985.1

CDK7-209, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 261 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-209ENST00000512985 IL18RAPO95256 599 aa13.9□□□□□ -0.18
CDK7-209ENST00000512985 GALTP07902 379 aa13.9□□□□□ -0.18
CDK7-209ENST00000512985 KCNE1P15382 129 aa13.9□□□□□ -0.18
CDK7-209ENST00000512985 DSC1Q08554 894 aa13.9□□□□□ -0.18
CDK7-209ENST00000512985 STIM1Q13586 685 aa13.9□□□□□ -0.18
CDK7-209ENST00000512985 ZNF280BQ86YH2 543 aa13.9□□□□□ -0.18
CDK7-209ENST00000512985 COLGALT2Q8IYK4 626 aa13.9□□□□□ -0.18
CDK7-209ENST00000512985 SLC39A11Q8N1S5 342 aa13.9□□□□□ -0.18
CDK7-209ENST00000512985 CEP120Q8N960 986 aa13.9□□□□□ -0.18
CDK7-209ENST00000512985 MICAL1Q8TDZ2 1067 aa13.9□□□□□ -0.18
CDK7-209ENST00000512985 SCFD1Q8WVM8 642 aa13.9□□□□□ -0.18
CDK7-209ENST00000512985 POF1BQ8WVV4 589 aa13.9□□□□□ -0.18
CDK7-209ENST00000512985 IGSF21Q96ID5 467 aa13.9□□□□□ -0.18
CDK7-209ENST00000512985 ASB7Q9H672 318 aa13.9□□□□□ -0.18
CDK7-209ENST00000512985 NGRNQ9NPE2 291 aaKnown RBP13.9□□□□□ -0.18
CDK7-209ENST00000512985 TLR9Q9NR96 1032 aa13.9□□□□□ -0.18
CDK7-209ENST00000512985 SSX2IPQ9Y2D8 614 aa13.9□□□□□ -0.18
CDK7-209ENST00000512985 DERAQ9Y315 318 aa13.9□□□□□ -0.18
CDK7-209ENST00000512985 CHD9Q3L8U1 2897 aa13.9□□□□□ -0.18
CDK7-209ENST00000512985 SMIM28A0A1B0GU29 152 aa13.89□□□□□ -0.19
CDK7-209ENST00000512985 EPOPA6NHQ4 379 aa13.89□□□□□ -0.19
CDK7-209ENST00000512985 NRP1O14786 923 aa13.89□□□□□ -0.19
CDK7-209ENST00000512985 TRAPPC3O43617 180 aa13.89□□□□□ -0.19
CDK7-209ENST00000512985 NCK2O43639 380 aa13.89□□□□□ -0.19
CDK7-209ENST00000512985 CALUO43852 315 aaPredicted RBP13.89□□□□□ -0.19
CDK7-209ENST00000512985 EXTL3O43909 919 aa13.89□□□□□ -0.19
CDK7-209ENST00000512985 GADD45BO75293 160 aaPredicted RBP13.89□□□□□ -0.19
CDK7-209ENST00000512985 DDHD2O94830 711 aa13.89□□□□□ -0.19
CDK7-209ENST00000512985 ITGB1P05556 798 aa13.89□□□□□ -0.19
CDK7-209ENST00000512985 PRR29P0C7W0 189 aa13.89□□□□□ -0.19
CDK7-209ENST00000512985 CXCL8P10145 99 aa13.89□□□□□ -0.19
CDK7-209ENST00000512985 RPL9P32969 192 aaKnown RBP13.89□□□□□ -0.19
CDK7-209ENST00000512985 SLC11A1P49279 550 aa13.89□□□□□ -0.19
CDK7-209ENST00000512985 KCNA1Q09470 495 aa13.89□□□□□ -0.19
CDK7-209ENST00000512985 ELAVL2Q12926 359 aaKnown RBP13.89□□□□□ -0.19
CDK7-209ENST00000512985 PNOCQ13519 176 aa13.89□□□□□ -0.19
CDK7-209ENST00000512985 SURF1Q15526 300 aa13.89□□□□□ -0.19
CDK7-209ENST00000512985 XKR4Q5GH76 650 aa13.89□□□□□ -0.19
CDK7-209ENST00000512985 SLC39A4Q6P5W5 647 aa13.89□□□□□ -0.19
CDK7-209ENST00000512985 ALKAL1Q6UXT8 129 aa13.89□□□□□ -0.19
CDK7-209ENST00000512985 DDX53Q86TM3 631 aaKnown RBP13.89□□□□□ -0.19
CDK7-209ENST00000512985 NT5DC4Q86YG4 428 aa13.89□□□□□ -0.19
CDK7-209ENST00000512985 NELFCDQ8IXH7 590 aa13.89□□□□□ -0.19
CDK7-209ENST00000512985 GPD1LQ8N335 351 aa13.89□□□□□ -0.19
CDK7-209ENST00000512985 GSTCDQ8NEC7 633 aa13.89□□□□□ -0.19
CDK7-209ENST00000512985 SPPL3Q8TCT6 385 aa13.89□□□□□ -0.19
CDK7-209ENST00000512985 HPS3Q969F9 1004 aa13.89□□□□□ -0.19
CDK7-209ENST00000512985 FAM212AQ96EL1 285 aa13.89□□□□□ -0.19
CDK7-209ENST00000512985 ALG13Q9NP73 1137 aaKnown RBP13.89□□□□□ -0.19
CDK7-209ENST00000512985 ENTPD7Q9NQZ7 604 aa13.89□□□□□ -0.19
CDK7-209ENST00000512985 DNAJB4Q9UDY4 337 aa13.89□□□□□ -0.19
CDK7-209ENST00000512985 CPSF3Q9UKF6 684 aaKnown RBP13.89□□□□□ -0.19
CDK7-209ENST00000512985 UBQLN1Q9UMX0 589 aaKnown RBP13.89□□□□□ -0.19
CDK7-209ENST00000512985 MTCH2Q9Y6C9 303 aa13.89□□□□□ -0.19
CDK7-209ENST00000512985 ZNF233A6NK53 670 aa13.88□□□□□ -0.19
CDK7-209ENST00000512985 RFXAPO00287 272 aa13.88□□□□□ -0.19
CDK7-209ENST00000512985 PTGESO14684 152 aa13.88□□□□□ -0.19
CDK7-209ENST00000512985 TADA2AO75478 443 aa13.88□□□□□ -0.19
CDK7-209ENST00000512985 PAX3P23760 479 aa13.88□□□□□ -0.19
CDK7-209ENST00000512985 ACOT2P49753 483 aa13.88□□□□□ -0.19
CDK7-209ENST00000512985 AFF1P51825 1210 aaKnown RBP13.88□□□□□ -0.19
CDK7-209ENST00000512985 STK4Q13043 487 aa13.88□□□□□ -0.19
CDK7-209ENST00000512985 SLC10A6Q3KNW5 377 aa13.88□□□□□ -0.19
CDK7-209ENST00000512985 ZNF658Q5TYW1 1059 aaPredicted RBP13.88□□□□□ -0.19
CDK7-209ENST00000512985 TMC7Q7Z402 723 aa13.88□□□□□ -0.19
CDK7-209ENST00000512985 SPRED2Q7Z698 418 aa13.88□□□□□ -0.19
CDK7-209ENST00000512985 C12orf56Q8IXR9 622 aa13.88□□□□□ -0.19
CDK7-209ENST00000512985 MICALL1Q8N3F8 863 aa13.88□□□□□ -0.19
CDK7-209ENST00000512985 GUF1Q8N442 669 aaKnown RBP13.88□□□□□ -0.19
CDK7-209ENST00000512985 BEST2Q8NFU1 509 aa13.88□□□□□ -0.19
CDK7-209ENST00000512985 NOC3LQ8WTT2 800 aaKnown RBP13.88□□□□□ -0.19
CDK7-209ENST00000512985 KIF12Q96FN5 646 aa13.88□□□□□ -0.19
CDK7-209ENST00000512985 PPP1R10Q96QC0 940 aaKnown RBP13.88□□□□□ -0.19
CDK7-209ENST00000512985 FAM213AQ9BRX8 229 aa13.88□□□□□ -0.19
CDK7-209ENST00000512985 FGFBP2Q9BYJ0 223 aa13.88□□□□□ -0.19
CDK7-209ENST00000512985 NSUN3Q9H649 340 aaKnown RBP13.88□□□□□ -0.19
CDK7-209ENST00000512985 MIOSQ9NXC5 875 aa13.88□□□□□ -0.19
CDK7-209ENST00000512985 ADAM28Q9UKQ2 775 aa13.88□□□□□ -0.19
CDK7-209ENST00000512985 PRG3Q9Y2Y8 225 aaPredicted RBP13.88□□□□□ -0.19
CDK7-209ENST00000512985 R3HCC1Q9Y3T6 440 aaKnown RBP13.88□□□□□ -0.19
CDK7-209ENST00000512985 SF3B1O75533 1304 aaKnown RBP eCLIP13.88□□□□□ -0.19
CDK7-209ENST00000512985 TTC26A0AVF1 554 aa13.87□□□□□ -0.19
CDK7-209ENST00000512985 NT5C1B-RDH14C9J2C7 533 aa13.87□□□□□ -0.19
CDK7-209ENST00000512985 PDXKO00764 312 aa13.87□□□□□ -0.19
CDK7-209ENST00000512985 GRM6O15303 877 aa13.87□□□□□ -0.19
CDK7-209ENST00000512985 CYP3A5P20815 502 aa13.87□□□□□ -0.19
CDK7-209ENST00000512985 RPL13P26373 211 aaKnown RBP13.87□□□□□ -0.19
CDK7-209ENST00000512985 ADSSP30520 456 aa13.87□□□□□ -0.19
CDK7-209ENST00000512985 PBX3P40426 434 aa13.87□□□□□ -0.19
CDK7-209ENST00000512985 ADGRE1Q14246 886 aa13.87□□□□□ -0.19
CDK7-209ENST00000512985 MYBPC2Q14324 1141 aa13.87□□□□□ -0.19
CDK7-209ENST00000512985 SMC1AQ14683 1233 aaKnown RBP13.87□□□□□ -0.19
CDK7-209ENST00000512985 TMEM132DQ14C87 1099 aa13.87□□□□□ -0.19
CDK7-209ENST00000512985 ENOX2Q16206 610 aaKnown RBP13.87□□□□□ -0.19
CDK7-209ENST00000512985 SEZ6Q53EL9 994 aa13.87□□□□□ -0.19
CDK7-209ENST00000512985 GLRA4Q5JXX5 417 aa13.87□□□□□ -0.19
CDK7-209ENST00000512985 KIAA1841Q6NSI8 718 aa13.87□□□□□ -0.19
CDK7-209ENST00000512985 PDXDC1Q6P996 788 aa13.87□□□□□ -0.19
CDK7-209ENST00000512985 DCLRE1AQ6PJP8 1040 aa13.87□□□□□ -0.19
CDK7-209ENST00000512985 USP37Q86T82 979 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms