RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	RSAD1	Q9HA92	442 aa		15.85	■□□□□ 0.13
MATR3-238	ENST00000512107	TOPORS	Q9NS56	1045 aa	Predicted RBP	15.85	■□□□□ 0.13
MATR3-238	ENST00000512107	RWDD2A	Q9UIY3	292 aa		15.85	■□□□□ 0.13
MATR3-238	ENST00000512107	TDRD15	B5MCY1	1934 aa	Known RBP	15.85	■□□□□ 0.13
MATR3-238	ENST00000512107		F8W810	466 aa		15.84	■□□□□ 0.13
MATR3-238	ENST00000512107	PSMA7	O14818	248 aa		15.84	■□□□□ 0.13
MATR3-238	ENST00000512107	EFCAB14	O75071	495 aa		15.84	■□□□□ 0.13
MATR3-238	ENST00000512107	NFIC	P08651	508 aa		15.84	■□□□□ 0.13
MATR3-238	ENST00000512107	ADAM9	Q13443	819 aa		15.84	■□□□□ 0.13
MATR3-238	ENST00000512107	EDRF1	Q3B7T1	1238 aa		15.84	■□□□□ 0.13
MATR3-238	ENST00000512107	HS2ST1	Q7LGA3	356 aa		15.84	■□□□□ 0.13
MATR3-238	ENST00000512107	BRSK2	Q8IWQ3	736 aa		15.84	■□□□□ 0.13
MATR3-238	ENST00000512107	XXYLT1	Q8NBI6	393 aa		15.84	■□□□□ 0.13
MATR3-238	ENST00000512107	ZNF516	Q92618	1163 aa		15.84	■□□□□ 0.13
MATR3-238	ENST00000512107	SYAP1	Q96A49	352 aa	Predicted RBP	15.84	■□□□□ 0.13
MATR3-238	ENST00000512107	MFSD14A	Q96MC6	490 aa		15.84	■□□□□ 0.13
MATR3-238	ENST00000512107	ACAP3	Q96P50	834 aa		15.84	■□□□□ 0.13
MATR3-238	ENST00000512107	SLC9A7	Q96T83	725 aa		15.84	■□□□□ 0.13
MATR3-238	ENST00000512107	GOLGA2P5	Q9HBQ8	144 aa		15.84	■□□□□ 0.13
MATR3-238	ENST00000512107	PDE11A	Q9HCR9	933 aa		15.84	■□□□□ 0.13
MATR3-238	ENST00000512107	LRFN2	Q9ULH4	789 aa		15.84	■□□□□ 0.13
MATR3-238	ENST00000512107	GIT1	Q9Y2X7	761 aa		15.84	■□□□□ 0.13
MATR3-238	ENST00000512107	MRPL42	Q9Y6G3	142 aa	Known RBP	15.84	■□□□□ 0.13
MATR3-238	ENST00000512107	SMIM28	A0A1B0GU29	152 aa		15.83	■□□□□ 0.12
MATR3-238	ENST00000512107	SOX1	O00570	391 aa	Predicted RBP	15.83	■□□□□ 0.12
MATR3-238	ENST00000512107	CLTA	P09496	248 aa		15.83	■□□□□ 0.12
MATR3-238	ENST00000512107	PBX3	P40426	434 aa		15.83	■□□□□ 0.12
MATR3-238	ENST00000512107	SNRPF	P62306	86 aa	Known RBP	15.83	■□□□□ 0.12
MATR3-238	ENST00000512107	CYP24A1	Q07973	514 aa		15.83	■□□□□ 0.12
MATR3-238	ENST00000512107	ZBTB6	Q15916	424 aa		15.83	■□□□□ 0.12
MATR3-238	ENST00000512107	SNRNP35	Q16560	246 aa	Known RBP	15.83	■□□□□ 0.12
MATR3-238	ENST00000512107	HSP90AA4P	Q58FG1	418 aa		15.83	■□□□□ 0.12
MATR3-238	ENST00000512107	CEP135	Q66GS9	1140 aa		15.83	■□□□□ 0.12
MATR3-238	ENST00000512107	JADE1	Q6IE81	842 aa		15.83	■□□□□ 0.12
MATR3-238	ENST00000512107	CD300LG	Q6UXG3	332 aa		15.83	■□□□□ 0.12
MATR3-238	ENST00000512107	DHX40	Q8IX18	779 aa	Known RBP	15.83	■□□□□ 0.12
MATR3-238	ENST00000512107	PHOSPHO2	Q8TCD6	241 aa		15.83	■□□□□ 0.12
MATR3-238	ENST00000512107	SP7	Q8TDD2	431 aa	Predicted RBP	15.83	■□□□□ 0.12
MATR3-238	ENST00000512107	PGBD4	Q96DM1	585 aa		15.83	■□□□□ 0.12
MATR3-238	ENST00000512107	FAM212A	Q96EL1	285 aa		15.83	■□□□□ 0.12
MATR3-238	ENST00000512107	PPP1R10	Q96QC0	940 aa	Known RBP	15.83	■□□□□ 0.12
MATR3-238	ENST00000512107	PAAF1	Q9BRP4	392 aa		15.83	■□□□□ 0.12
MATR3-238	ENST00000512107	CCDC94	Q9BW85	323 aa	Predicted RBP	15.83	■□□□□ 0.12
MATR3-238	ENST00000512107	SRRT	Q9BXP5	876 aa	Known RBP	15.83	■□□□□ 0.12
MATR3-238	ENST00000512107	PBX4	Q9BYU1	374 aa		15.83	■□□□□ 0.12
MATR3-238	ENST00000512107	NRDE2	Q9H7Z3	1164 aa		15.83	■□□□□ 0.12
MATR3-238	ENST00000512107	SAMSN1	Q9NSI8	373 aa	Known RBP	15.83	■□□□□ 0.12
MATR3-238	ENST00000512107	TBC1D13	Q9NVG8	400 aa		15.83	■□□□□ 0.12
MATR3-238	ENST00000512107	ANO10	Q9NW15	660 aa		15.83	■□□□□ 0.12
MATR3-238	ENST00000512107	CNTN3	Q9P232	1028 aa		15.83	■□□□□ 0.12
MATR3-238	ENST00000512107	DNAJB4	Q9UDY4	337 aa		15.83	■□□□□ 0.12
MATR3-238	ENST00000512107	TUBGCP4	Q9UGJ1	667 aa		15.83	■□□□□ 0.12
MATR3-238	ENST00000512107	LAMA2	P24043	3122 aa	Known RBP	15.82	■□□□□ 0.12
MATR3-238	ENST00000512107	PPEF2	O14830	753 aa		15.82	■□□□□ 0.12
MATR3-238	ENST00000512107	EXOC3	O60645	756 aa		15.82	■□□□□ 0.12
MATR3-238	ENST00000512107	SKI	P12755	728 aa		15.82	■□□□□ 0.12
MATR3-238	ENST00000512107	LRRC63	Q05C16	580 aa		15.82	■□□□□ 0.12
MATR3-238	ENST00000512107	IQCB1	Q15051	598 aa		15.82	■□□□□ 0.12
MATR3-238	ENST00000512107	NOMO2	Q5JPE7	1267 aa		15.82	■□□□□ 0.12
MATR3-238	ENST00000512107	OR5B17	Q8NGF7	314 aa		15.82	■□□□□ 0.12
MATR3-238	ENST00000512107	CXorf38	Q8TB03	319 aa		15.82	■□□□□ 0.12
MATR3-238	ENST00000512107	BCL7C	Q8WUZ0	217 aa	Predicted RBP	15.82	■□□□□ 0.12
MATR3-238	ENST00000512107	ELMO3	Q96BJ8	720 aa		15.82	■□□□□ 0.12
MATR3-238	ENST00000512107	GTPBP4	Q9BZE4	634 aa	Known RBP	15.82	■□□□□ 0.12
MATR3-238	ENST00000512107	TMEM117	Q9H0C3	514 aa		15.82	■□□□□ 0.12
MATR3-238	ENST00000512107	RPF1	Q9H9Y2	349 aa	Known RBP	15.82	■□□□□ 0.12
MATR3-238	ENST00000512107	RBAK	Q9NYW8	714 aa	Predicted RBP	15.82	■□□□□ 0.12
MATR3-238	ENST00000512107	CGN	Q9P2M7	1197 aa	Known RBP	15.82	■□□□□ 0.12
MATR3-238	ENST00000512107		A0A0C4DFX4	3053 aa		15.82	■□□□□ 0.12
MATR3-238	ENST00000512107	LRRIQ3	A6PVS8	624 aa	Predicted RBP	15.81	■□□□□ 0.12
MATR3-238	ENST00000512107	LRRN2	O75325	713 aa		15.81	■□□□□ 0.12
MATR3-238	ENST00000512107	KIF20A	O95235	890 aa		15.81	■□□□□ 0.12
MATR3-238	ENST00000512107	TRIM49	P0CI25	452 aa		15.81	■□□□□ 0.12
MATR3-238	ENST00000512107	TRIM49C	P0CI26	452 aa		15.81	■□□□□ 0.12
MATR3-238	ENST00000512107	KCNE1	P15382	129 aa		15.81	■□□□□ 0.12
MATR3-238	ENST00000512107	ERCC5	P28715	1186 aa	Predicted RBP	15.81	■□□□□ 0.12
MATR3-238	ENST00000512107	MCCD1	P59942	119 aa	Predicted RBP	15.81	■□□□□ 0.12
MATR3-238	ENST00000512107	STIM1	Q13586	685 aa		15.81	■□□□□ 0.12
MATR3-238	ENST00000512107	MYBPC2	Q14324	1141 aa		15.81	■□□□□ 0.12
MATR3-238	ENST00000512107	CHD9	Q3L8U1	2897 aa		15.81	■□□□□ 0.12
MATR3-238	ENST00000512107	NLRC5	Q86WI3	1866 aa		15.81	■□□□□ 0.12
MATR3-238	ENST00000512107	TMEM173	Q86WV6	379 aa	Predicted RBP	15.81	■□□□□ 0.12
MATR3-238	ENST00000512107	GAS2L3	Q86XJ1	694 aa		15.81	■□□□□ 0.12
MATR3-238	ENST00000512107	GOLGA5	Q8TBA6	731 aa		15.81	■□□□□ 0.12
MATR3-238	ENST00000512107	NKX2-4	Q9H2Z4	354 aa		15.81	■□□□□ 0.12
MATR3-238	ENST00000512107	LINC01553	A4QN01	128 aa		15.8	■□□□□ 0.12
MATR3-238	ENST00000512107	ZNF233	A6NK53	670 aa		15.8	■□□□□ 0.12
MATR3-238	ENST00000512107	TLL1	O43897	1013 aa		15.8	■□□□□ 0.12
MATR3-238	ENST00000512107	LETM1	O95202	739 aa	Predicted RBP	15.8	■□□□□ 0.12
MATR3-238	ENST00000512107	CA3	P07451	260 aa		15.8	■□□□□ 0.12
MATR3-238	ENST00000512107	FKBP3	Q00688	224 aa	Known RBP	15.8	■□□□□ 0.12
MATR3-238	ENST00000512107	DSC1	Q08554	894 aa		15.8	■□□□□ 0.12
MATR3-238	ENST00000512107	PSMD6	Q15008	389 aa		15.8	■□□□□ 0.12
MATR3-238	ENST00000512107	FOXR2	Q6PJQ5	311 aa		15.8	■□□□□ 0.12
MATR3-238	ENST00000512107	FAM43B	Q6ZT52	329 aa	Predicted RBP	15.8	■□□□□ 0.12
MATR3-238	ENST00000512107	COLGALT2	Q8IYK4	626 aa		15.8	■□□□□ 0.12
MATR3-238	ENST00000512107	FAM186B	Q8IYM0	893 aa		15.8	■□□□□ 0.12
MATR3-238	ENST00000512107	CMTR2	Q8IYT2	770 aa	Known RBP	15.8	■□□□□ 0.12
MATR3-238	ENST00000512107	CSGALNACT2	Q8N6G5	542 aa		15.8	■□□□□ 0.12
MATR3-238	ENST00000512107	AOPEP	Q8N6M6	819 aa		15.8	■□□□□ 0.12

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms