RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 PRPF4BQ13523 1007 aaKnown RBP8.77□□□□□ -1.01
HTT-209ENST00000512068 RAPGEF1Q13905 1077 aa8.77□□□□□ -1.01
HTT-209ENST00000512068 KIAA0753Q2KHM9 967 aa8.77□□□□□ -1.01
HTT-209ENST00000512068 TDRD12Q587J7 1177 aaKnown RBP8.77□□□□□ -1.01
HTT-209ENST00000512068 SFMBT2Q5VUG0 894 aa8.77□□□□□ -1.01
HTT-209ENST00000512068 CDCA2Q69YH5 1023 aaPredicted RBP8.77□□□□□ -1.01
HTT-209ENST00000512068 NFRKBQ6P4R8 1299 aa8.77□□□□□ -1.01
HTT-209ENST00000512068 TRAF7Q6Q0C0 670 aa8.77□□□□□ -1.01
HTT-209ENST00000512068 MTHFD1LQ6UB35 978 aa8.77□□□□□ -1.01
HTT-209ENST00000512068 ZPBP2Q6X784 338 aa8.77□□□□□ -1.01
HTT-209ENST00000512068 RRAGAQ7L523 313 aa8.77□□□□□ -1.01
HTT-209ENST00000512068 TXLNBQ8N3L3 684 aa8.77□□□□□ -1.01
HTT-209ENST00000512068 C7orf31Q8N865 590 aa8.77□□□□□ -1.01
HTT-209ENST00000512068 PLPP7Q8NBV4 271 aa8.77□□□□□ -1.01
HTT-209ENST00000512068 TMEM174Q8WUU8 243 aa8.77□□□□□ -1.01
HTT-209ENST00000512068 TRIB2Q92519 343 aa8.77□□□□□ -1.01
HTT-209ENST00000512068 KCNN1Q92952 543 aa8.77□□□□□ -1.01
HTT-209ENST00000512068 SLC35C1Q96A29 364 aa8.77□□□□□ -1.01
HTT-209ENST00000512068 CEP89Q96ST8 783 aa8.77□□□□□ -1.01
HTT-209ENST00000512068 FAM213AQ9BRX8 229 aa8.77□□□□□ -1.01
HTT-209ENST00000512068 CRACR2AQ9BSW2 395 aa8.77□□□□□ -1.01
HTT-209ENST00000512068 ARHGAP39Q9C0H5 1083 aa8.77□□□□□ -1.01
HTT-209ENST00000512068 IKZF4Q9H2S9 585 aa8.77□□□□□ -1.01
HTT-209ENST00000512068 RNF186Q9NXI6 227 aa8.77□□□□□ -1.01
HTT-209ENST00000512068 AGO2Q9UKV8 859 aaKnown RBP8.77□□□□□ -1.01
HTT-209ENST00000512068 GABRQQ9UN88 632 aa8.77□□□□□ -1.01
HTT-209ENST00000512068 SIK3Q9Y2K2 1263 aa8.77□□□□□ -1.01
HTT-209ENST00000512068 C17orf102A2RUQ5 167 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 ZBTB42B2RXF5 422 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 TISP43B9A030 160 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 ANKRD63C9JTQ0 380 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 M0QZ92 97 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 TNFRSF10AO00220 468 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 CLDN3O15551 220 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 SEPT4O43236 478 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 OFD1O75665 1012 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 TOM1L1O75674 476 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 HMGCRP04035 888 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 TRIM49P0CI25 452 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 TRIM49CP0CI26 452 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 SMIM10L2AP0DMW4 78 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 SMIM10L2BP0DMW5 78 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 CYBAP13498 195 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 RFX1P22670 979 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 POLR2FP61218 127 aaKnown RBP8.76□□□□□ -1.01
HTT-209ENST00000512068 BEX3Q00994 111 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 POU5F1BQ06416 359 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 ENPEPQ07075 957 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 DHX9Q08211 1270 aaKnown RBP8.76□□□□□ -1.01
HTT-209ENST00000512068 SURF1Q15526 300 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 PTPN14Q15678 1187 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 ASIC2Q16515 512 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 ZNF568Q3ZCX4 644 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 SLC9C1Q4G0N8 1177 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 GNASQ5JWF2 1037 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 ZNF410Q86VK4 478 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 VPS36Q86VN1 386 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 CYP4X1Q8N118 509 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 CCAR2Q8N163 923 aaKnown RBP8.76□□□□□ -1.01
HTT-209ENST00000512068 CCDC155Q8N6L0 562 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 CD99L2Q8TCZ2 262 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 VTI1AQ96AJ9 217 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 CCDC127Q96BQ5 260 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 LENG1Q96BZ8 264 aaPredicted RBP8.76□□□□□ -1.01
HTT-209ENST00000512068 CCDC42Q96M95 316 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 DNAJC7Q99615 494 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 ADPGKQ9BRR6 497 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 MTG1Q9BT17 334 aaPredicted RBP8.76□□□□□ -1.01
HTT-209ENST00000512068 TARS2Q9BW92 718 aaKnown RBP8.76□□□□□ -1.01
HTT-209ENST00000512068 CFHR5Q9BXR6 569 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 GCOM2Q9BZD3 368 aaPredicted RBP8.76□□□□□ -1.01
HTT-209ENST00000512068 TMX1Q9H3N1 280 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 NLRC4Q9NPP4 1024 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 LUC7LQ9NQ29 371 aaKnown RBP8.76□□□□□ -1.01
HTT-209ENST00000512068 PLCB1Q9NQ66 1216 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 RRAGDQ9NQL2 400 aaPredicted RBP8.76□□□□□ -1.01
HTT-209ENST00000512068 TRMT1Q9NXH9 659 aaKnown RBP8.76□□□□□ -1.01
HTT-209ENST00000512068 RBAKQ9NYW8 714 aaPredicted RBP8.76□□□□□ -1.01
HTT-209ENST00000512068 SRRDQ9UH36 339 aa8.76□□□□□ -1.01
HTT-209ENST00000512068 TTC24A2A3L6 582 aaPredicted RBP8.75□□□□□ -1.01
HTT-209ENST00000512068 SOWAHDA6NJG2 315 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 LRRC53A6NM62 1247 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 ACKR2O00590 384 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 ADCY6O43306 1168 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 FKTNO75072 461 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 VTNP04004 478 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 TUBB4AP04350 444 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 DLATP10515 647 aaKnown RBP8.75□□□□□ -1.01
HTT-209ENST00000512068 CYP2C9P11712 490 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 TNNI1P19237 187 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 CTGFP29279 349 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 GTF2H1P32780 548 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 VEGFBP49765 207 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 PRMT2P55345 433 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 PTENP60484 403 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 KRT83P78385 493 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 CYP24A1Q07973 514 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 DRP2Q13474 957 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 SPA17Q15506 151 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 KYAT1Q16773 422 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms