RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 KCNQ1P51787 676 aa4.8□□□□□ -1.64
TOPBP1-208ENST00000511439 HHEXQ03014 270 aa4.8□□□□□ -1.64
TOPBP1-208ENST00000511439 LSM12Q3MHD2 195 aaKnown RBP4.8□□□□□ -1.64
TOPBP1-208ENST00000511439 TTC38Q5R3I4 469 aa4.8□□□□□ -1.64
TOPBP1-208ENST00000511439 IQSEC1Q6DN90 963 aa4.8□□□□□ -1.64
TOPBP1-208ENST00000511439 LRSAM1Q6UWE0 723 aa4.8□□□□□ -1.64
TOPBP1-208ENST00000511439 OTOP2Q7RTS6 562 aa4.8□□□□□ -1.64
TOPBP1-208ENST00000511439 NECAB2Q7Z6G3 386 aa4.8□□□□□ -1.64
TOPBP1-208ENST00000511439 RASSF3Q86WH2 238 aa4.8□□□□□ -1.64
TOPBP1-208ENST00000511439 PHYKPLQ8IUZ5 450 aa4.8□□□□□ -1.64
TOPBP1-208ENST00000511439 C1orf210Q8IVY1 113 aa4.8□□□□□ -1.64
TOPBP1-208ENST00000511439 MAML3Q96JK9 1138 aa4.8□□□□□ -1.64
TOPBP1-208ENST00000511439 SNX27Q96L92 541 aa4.8□□□□□ -1.64
TOPBP1-208ENST00000511439 PLA2G12BQ9BX93 195 aa4.8□□□□□ -1.64
TOPBP1-208ENST00000511439 OR10A5Q9H207 317 aa4.8□□□□□ -1.64
TOPBP1-208ENST00000511439 OR10A2Q9H208 303 aa4.8□□□□□ -1.64
TOPBP1-208ENST00000511439 MS4A5Q9H3V2 200 aa4.8□□□□□ -1.64
TOPBP1-208ENST00000511439 SLC5A4Q9NY91 659 aa4.8□□□□□ -1.64
TOPBP1-208ENST00000511439 RNF181Q9P0P0 153 aa4.8□□□□□ -1.64
TOPBP1-208ENST00000511439 THSD7BQ9C0I4 1608 aa4.79□□□□□ -1.64
TOPBP1-208ENST00000511439 A0A0G2JNJ9 132 aa4.79□□□□□ -1.64
TOPBP1-208ENST00000511439 PMS2P1A4D2B8 440 aa4.79□□□□□ -1.64
TOPBP1-208ENST00000511439 ALG1L2C9J202 215 aa4.79□□□□□ -1.64
TOPBP1-208ENST00000511439 CA12O43570 354 aa4.79□□□□□ -1.64
TOPBP1-208ENST00000511439 ACRV1P26436 265 aa4.79□□□□□ -1.64
TOPBP1-208ENST00000511439 ANAPC15P60006 121 aa4.79□□□□□ -1.64
TOPBP1-208ENST00000511439 SLC6A3Q01959 620 aa4.79□□□□□ -1.64
TOPBP1-208ENST00000511439 ROM1Q03395 351 aa4.79□□□□□ -1.64
TOPBP1-208ENST00000511439 FAPQ12884 760 aa4.79□□□□□ -1.64
TOPBP1-208ENST00000511439 KANK2Q63ZY3 851 aa4.79□□□□□ -1.64
TOPBP1-208ENST00000511439 TRIM68Q6AZZ1 485 aa4.79□□□□□ -1.64
TOPBP1-208ENST00000511439 Q6ZSN1 163 aa4.79□□□□□ -1.64
TOPBP1-208ENST00000511439 FRMD7Q6ZUT3 714 aa4.79□□□□□ -1.64
TOPBP1-208ENST00000511439 HDGFL2Q7Z4V5 671 aaPredicted RBP4.79□□□□□ -1.64
TOPBP1-208ENST00000511439 ADGRE4PQ86SQ3 457 aa4.79□□□□□ -1.64
TOPBP1-208ENST00000511439 ANKRD13AQ8IZ07 590 aa4.79□□□□□ -1.64
TOPBP1-208ENST00000511439 RTKN2Q8IZC4 609 aa4.79□□□□□ -1.64
TOPBP1-208ENST00000511439 C7orf31Q8N865 590 aa4.79□□□□□ -1.64
TOPBP1-208ENST00000511439 CALML6Q8TD86 181 aa4.79□□□□□ -1.64
TOPBP1-208ENST00000511439 EXTL1Q92935 676 aa4.79□□□□□ -1.64
TOPBP1-208ENST00000511439 TUBGCP5Q96RT8 1024 aa4.79□□□□□ -1.64
TOPBP1-208ENST00000511439 PUS7LQ9H0K6 701 aaKnown RBP4.79□□□□□ -1.64
TOPBP1-208ENST00000511439 VTA1Q9NP79 307 aa4.79□□□□□ -1.64
TOPBP1-208ENST00000511439 Q9UFV3 132 aa4.79□□□□□ -1.64
TOPBP1-208ENST00000511439 MSRAQ9UJ68 235 aa4.79□□□□□ -1.64
TOPBP1-208ENST00000511439 ING1Q9UK53 422 aaPredicted RBP4.79□□□□□ -1.64
TOPBP1-208ENST00000511439 NOC2LQ9Y3T9 749 aaKnown RBP4.79□□□□□ -1.64
TOPBP1-208ENST00000511439 COL5A2P05997 1499 aaPredicted RBP4.79□□□□□ -1.64
TOPBP1-208ENST00000511439 LMO7Q8WWI1 1683 aa4.79□□□□□ -1.64
TOPBP1-208ENST00000511439 LTBP1Q14766 1721 aa4.78□□□□□ -1.64
TOPBP1-208ENST00000511439 LCHNA4D1U4 455 aa4.78□□□□□ -1.64
TOPBP1-208ENST00000511439 K7ESF4 209 aa4.78□□□□□ -1.64
TOPBP1-208ENST00000511439 MATN2O00339 956 aa4.78□□□□□ -1.64
TOPBP1-208ENST00000511439 CYP27B1O15528 508 aa4.78□□□□□ -1.64
TOPBP1-208ENST00000511439 RAB11FIP3O75154 756 aa4.78□□□□□ -1.64
TOPBP1-208ENST00000511439 MAFO75444 373 aaPredicted RBP4.78□□□□□ -1.64
TOPBP1-208ENST00000511439 PRKD3O94806 890 aa4.78□□□□□ -1.64
TOPBP1-208ENST00000511439 PLA2G5P39877 138 aa4.78□□□□□ -1.64
TOPBP1-208ENST00000511439 ADCY8P40145 1251 aa4.78□□□□□ -1.64
TOPBP1-208ENST00000511439 RGS3P49796 1198 aa4.78□□□□□ -1.64
TOPBP1-208ENST00000511439 GUCY2FP51841 1108 aa4.78□□□□□ -1.64
TOPBP1-208ENST00000511439 MAP3K12Q12852 859 aa4.78□□□□□ -1.64
TOPBP1-208ENST00000511439 DUSP8Q13202 625 aa4.78□□□□□ -1.64
TOPBP1-208ENST00000511439 MOGSQ13724 837 aa4.78□□□□□ -1.64
TOPBP1-208ENST00000511439 MYBPC3Q14896 1274 aa4.78□□□□□ -1.64
TOPBP1-208ENST00000511439 PCOLCEQ15113 449 aa4.78□□□□□ -1.64
TOPBP1-208ENST00000511439 TMEM200BQ69YZ2 307 aa4.78□□□□□ -1.64
TOPBP1-208ENST00000511439 SLFN12LQ6IEE8 588 aa4.78□□□□□ -1.64
TOPBP1-208ENST00000511439 KANSL1Q7Z3B3 1105 aa4.78□□□□□ -1.64
TOPBP1-208ENST00000511439 COL23A1Q86Y22 540 aaPredicted RBP4.78□□□□□ -1.64
TOPBP1-208ENST00000511439 COG1Q8WTW3 980 aa4.78□□□□□ -1.64
TOPBP1-208ENST00000511439 PLEKHG4BQ96PX9 1271 aa4.78□□□□□ -1.64
TOPBP1-208ENST00000511439 KIAA1683Q9H0B3 1180 aa4.78□□□□□ -1.64
TOPBP1-208ENST00000511439 POFUT1Q9H488 388 aa4.78□□□□□ -1.64
TOPBP1-208ENST00000511439 TOPORSQ9NS56 1045 aaPredicted RBP4.78□□□□□ -1.64
TOPBP1-208ENST00000511439 PLA2G3Q9NZ20 509 aa4.78□□□□□ -1.64
TOPBP1-208ENST00000511439 WNK3Q9BYP7 1800 aa4.78□□□□□ -1.64
TOPBP1-208ENST00000511439 USP6P35125 1406 aa4.78□□□□□ -1.64
TOPBP1-208ENST00000511439 MYOM3Q5VTT5 1437 aa4.78□□□□□ -1.64
TOPBP1-208ENST00000511439 A0A0C4DFX4 3053 aa4.78□□□□□ -1.64
TOPBP1-208ENST00000511439 ELL2O00472 640 aaPredicted RBP4.77□□□□□ -1.65
TOPBP1-208ENST00000511439 NARSO43776 548 aaKnown RBP4.77□□□□□ -1.65
TOPBP1-208ENST00000511439 PRPF6O94906 941 aaKnown RBP4.77□□□□□ -1.65
TOPBP1-208ENST00000511439 APEX1P27695 318 aaKnown RBP4.77□□□□□ -1.65
TOPBP1-208ENST00000511439 HIBADHP31937 336 aaKnown RBP4.77□□□□□ -1.65
TOPBP1-208ENST00000511439 MRE11P49959 708 aa4.77□□□□□ -1.65
TOPBP1-208ENST00000511439 DPTQ07507 201 aa4.77□□□□□ -1.65
TOPBP1-208ENST00000511439 MTMR1Q13613 665 aa4.77□□□□□ -1.65
TOPBP1-208ENST00000511439 NOLC1Q14978 699 aaKnown RBP eCLIP4.77□□□□□ -1.65
TOPBP1-208ENST00000511439 PDCD1Q15116 288 aa4.77□□□□□ -1.65
TOPBP1-208ENST00000511439 DEFB115Q30KQ5 88 aa4.77□□□□□ -1.65
TOPBP1-208ENST00000511439 PRAMEF9Q5VWM5 478 aa4.77□□□□□ -1.65
TOPBP1-208ENST00000511439 GRAMD4Q6IC98 578 aa4.77□□□□□ -1.65
TOPBP1-208ENST00000511439 TIGD7Q6NT04 549 aaPredicted RBP4.77□□□□□ -1.65
TOPBP1-208ENST00000511439 ESPNLQ6ZVH7 1005 aa4.77□□□□□ -1.65
TOPBP1-208ENST00000511439 LARP4Q71RC2 724 aaKnown RBP eCLIP4.77□□□□□ -1.65
TOPBP1-208ENST00000511439 CNTD1Q8N815 330 aa4.77□□□□□ -1.65
TOPBP1-208ENST00000511439 CFHR4Q92496 578 aa4.77□□□□□ -1.65
TOPBP1-208ENST00000511439 LPPQ93052 612 aa4.77□□□□□ -1.65
TOPBP1-208ENST00000511439 FAM122AQ96E09 287 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms