RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 FRMD3A2A2Y4 597 aa15.27■□□□□ 0.04
DDX41-212ENST00000511040 CARNS1A5YM72 827 aa15.27■□□□□ 0.04
DDX41-212ENST00000511040 C2CD2LO14523 706 aa15.27■□□□□ 0.04
DDX41-212ENST00000511040 TBX10O75333 385 aa15.27■□□□□ 0.04
DDX41-212ENST00000511040 PIGRP01833 764 aa15.27■□□□□ 0.04
DDX41-212ENST00000511040 CMA1P23946 247 aa15.27■□□□□ 0.04
DDX41-212ENST00000511040 LTBRP36941 435 aa15.27■□□□□ 0.04
DDX41-212ENST00000511040 TNFSF9P41273 254 aa15.27■□□□□ 0.04
DDX41-212ENST00000511040 AMPD3Q01432 767 aa15.27■□□□□ 0.04
DDX41-212ENST00000511040 ADAM15Q13444 863 aa15.27■□□□□ 0.04
DDX41-212ENST00000511040 COL19A1Q14993 1142 aa15.27■□□□□ 0.04
DDX41-212ENST00000511040 NAB2Q15742 525 aa15.27■□□□□ 0.04
DDX41-212ENST00000511040 DUSP6Q16828 381 aa15.27■□□□□ 0.04
DDX41-212ENST00000511040 AAK1Q2M2I8 961 aa15.27■□□□□ 0.04
DDX41-212ENST00000511040 CTC1Q2NKJ3 1217 aa15.27■□□□□ 0.04
DDX41-212ENST00000511040 TJAP1Q5JTD0 557 aa15.27■□□□□ 0.04
DDX41-212ENST00000511040 ADALQ6DHV7 355 aa15.27■□□□□ 0.04
DDX41-212ENST00000511040 LLGL2Q6P1M3 1020 aa15.27■□□□□ 0.04
DDX41-212ENST00000511040 MAP4K3Q8IVH8 894 aa15.27■□□□□ 0.04
DDX41-212ENST00000511040 EFHBQ8N7U6 833 aa15.27■□□□□ 0.04
DDX41-212ENST00000511040 MRPL43Q8N983 215 aaKnown RBP15.27■□□□□ 0.04
DDX41-212ENST00000511040 VN1R2Q8NFZ6 395 aa15.27■□□□□ 0.04
DDX41-212ENST00000511040 KCNN1Q92952 543 aa15.27■□□□□ 0.04
DDX41-212ENST00000511040 B3GALT6Q96L58 329 aa15.27■□□□□ 0.04
DDX41-212ENST00000511040 SNX27Q96L92 541 aa15.27■□□□□ 0.04
DDX41-212ENST00000511040 ZMAT2Q96NC0 199 aaKnown RBP15.27■□□□□ 0.04
DDX41-212ENST00000511040 PPP1R10Q96QC0 940 aaKnown RBP15.27■□□□□ 0.04
DDX41-212ENST00000511040 LRRC27Q9C0I9 530 aa15.27■□□□□ 0.04
DDX41-212ENST00000511040 SCAND2PQ9GZW5 306 aaPredicted RBP15.27■□□□□ 0.04
DDX41-212ENST00000511040 ST6GALNAC4Q9H4F1 302 aa15.27■□□□□ 0.04
DDX41-212ENST00000511040 GOLGA2P5Q9HBQ8 144 aa15.27■□□□□ 0.04
DDX41-212ENST00000511040 TOPORSQ9NS56 1045 aaPredicted RBP15.27■□□□□ 0.04
DDX41-212ENST00000511040 TCF20Q9UGU0 1960 aaKnown RBP15.26■□□□□ 0.03
DDX41-212ENST00000511040 NCK2O43639 380 aa15.26■□□□□ 0.03
DDX41-212ENST00000511040 ACTN4O43707 911 aaKnown RBP15.26■□□□□ 0.03
DDX41-212ENST00000511040 PPP1R37O75864 691 aa15.26■□□□□ 0.03
DDX41-212ENST00000511040 GLP2RO95838 553 aa15.26■□□□□ 0.03
DDX41-212ENST00000511040 CXCL8P10145 99 aa15.26■□□□□ 0.03
DDX41-212ENST00000511040 CTSAP10619 480 aa15.26■□□□□ 0.03
DDX41-212ENST00000511040 SCP2P22307 547 aa15.26■□□□□ 0.03
DDX41-212ENST00000511040 IGFBP6P24592 240 aaPredicted RBP15.26■□□□□ 0.03
DDX41-212ENST00000511040 NDUFV1P49821 464 aa15.26■□□□□ 0.03
DDX41-212ENST00000511040 SPAG1Q07617 926 aa15.26■□□□□ 0.03
DDX41-212ENST00000511040 HSP90AA2PQ14568 343 aaPredicted RBP15.26■□□□□ 0.03
DDX41-212ENST00000511040 SLC10A6Q3KNW5 377 aa15.26■□□□□ 0.03
DDX41-212ENST00000511040 ALKAL1Q6UXT8 129 aa15.26■□□□□ 0.03
DDX41-212ENST00000511040 CEP57L1Q8IYX8 460 aa15.26■□□□□ 0.03
DDX41-212ENST00000511040 TMEM130Q8N3G9 435 aa15.26■□□□□ 0.03
DDX41-212ENST00000511040 FSIP1Q8NA03 581 aa15.26■□□□□ 0.03
DDX41-212ENST00000511040 GLIS3Q8NEA6 775 aa15.26■□□□□ 0.03
DDX41-212ENST00000511040 C18orf25Q96B23 403 aaPredicted RBP15.26■□□□□ 0.03
DDX41-212ENST00000511040 C7orf25Q9BPX7 421 aa15.26■□□□□ 0.03
DDX41-212ENST00000511040 MSTO1Q9BUK6 570 aa15.26■□□□□ 0.03
DDX41-212ENST00000511040 STRA6Q9BX79 667 aa15.26■□□□□ 0.03
DDX41-212ENST00000511040 BARX2Q9UMQ3 279 aaPredicted RBP15.26■□□□□ 0.03
DDX41-212ENST00000511040 A0A0B4J269 797 aa15.25■□□□□ 0.03
DDX41-212ENST00000511040 CLASP2O75122 1294 aaKnown RBP15.25■□□□□ 0.03
DDX41-212ENST00000511040 TADA2AO75478 443 aa15.25■□□□□ 0.03
DDX41-212ENST00000511040 PRPF6O94906 941 aaKnown RBP15.25■□□□□ 0.03
DDX41-212ENST00000511040 KIF4AO95239 1232 aa15.25■□□□□ 0.03
DDX41-212ENST00000511040 CLTAP09496 248 aa15.25■□□□□ 0.03
DDX41-212ENST00000511040 BMP1P13497 986 aa15.25■□□□□ 0.03
DDX41-212ENST00000511040 NDUFA8P51970 172 aa15.25■□□□□ 0.03
DDX41-212ENST00000511040 SOX4Q06945 474 aaPredicted RBP15.25■□□□□ 0.03
DDX41-212ENST00000511040 CUL4BQ13620 913 aa15.25■□□□□ 0.03
DDX41-212ENST00000511040 BMS1Q14692 1282 aaKnown RBP15.25■□□□□ 0.03
DDX41-212ENST00000511040 PTPN14Q15678 1187 aa15.25■□□□□ 0.03
DDX41-212ENST00000511040 LEXMQ3ZCV2 418 aa15.25■□□□□ 0.03
DDX41-212ENST00000511040 XKR4Q5GH76 650 aa15.25■□□□□ 0.03
DDX41-212ENST00000511040 L1TD1Q5T7N2 865 aaKnown RBP15.25■□□□□ 0.03
DDX41-212ENST00000511040 FUT10Q6P4F1 479 aa15.25■□□□□ 0.03
DDX41-212ENST00000511040 TMEM87AQ8NBN3 555 aa15.25■□□□□ 0.03
DDX41-212ENST00000511040 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.25■□□□□ 0.03
DDX41-212ENST00000511040 HVCN1Q96D96 273 aa15.25■□□□□ 0.03
DDX41-212ENST00000511040 NECAB3Q96P71 396 aaPredicted RBP15.25■□□□□ 0.03
DDX41-212ENST00000511040 ACCSQ96QU6 501 aa15.25■□□□□ 0.03
DDX41-212ENST00000511040 HERC2P3Q9BVR0 1158 aa15.25■□□□□ 0.03
DDX41-212ENST00000511040 GPR62Q9BZJ7 368 aa15.25■□□□□ 0.03
DDX41-212ENST00000511040 GOLPH3LQ9H4A5 285 aa15.25■□□□□ 0.03
DDX41-212ENST00000511040 MAGEF1Q9HAY2 307 aa15.25■□□□□ 0.03
DDX41-212ENST00000511040 OLFML3Q9NRN5 406 aa15.25■□□□□ 0.03
DDX41-212ENST00000511040 ADAM28Q9UKQ2 775 aa15.25■□□□□ 0.03
DDX41-212ENST00000511040 HPSEQ9Y251 543 aa15.25■□□□□ 0.03
DDX41-212ENST00000511040 CITO14578 2027 aa15.24■□□□□ 0.03
DDX41-212ENST00000511040 TULP1O00294 542 aaPredicted RBP15.24■□□□□ 0.03
DDX41-212ENST00000511040 OGTO15294 1046 aa15.24■□□□□ 0.03
DDX41-212ENST00000511040 FAM189A1O60320 539 aa15.24■□□□□ 0.03
DDX41-212ENST00000511040 SOD2P04179 222 aa15.24■□□□□ 0.03
DDX41-212ENST00000511040 URODP06132 367 aa15.24■□□□□ 0.03
DDX41-212ENST00000511040 SLFN14P0C7P3 912 aa15.24■□□□□ 0.03
DDX41-212ENST00000511040 KCNE1P15382 129 aa15.24■□□□□ 0.03
DDX41-212ENST00000511040 ABCD1P33897 745 aa15.24■□□□□ 0.03
DDX41-212ENST00000511040 SYKP43405 635 aa15.24■□□□□ 0.03
DDX41-212ENST00000511040 CLCNKBP51801 687 aa15.24■□□□□ 0.03
DDX41-212ENST00000511040 ENOX2Q16206 610 aaKnown RBP15.24■□□□□ 0.03
DDX41-212ENST00000511040 PTCRAQ6ISU1 281 aaPredicted RBP15.24■□□□□ 0.03
DDX41-212ENST00000511040 SYCP3Q8IZU3 236 aa15.24■□□□□ 0.03
DDX41-212ENST00000511040 ADAMTS19Q8TE59 1207 aa15.24■□□□□ 0.03
DDX41-212ENST00000511040 FAM212AQ96EL1 285 aa15.24■□□□□ 0.03
DDX41-212ENST00000511040 PAGE5Q96GU1 130 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms