RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 CSGALNACT1Q8TDX6 532 aa12.11□□□□□ -0.47
SNF8-207ENST00000509995 SLC39A7Q92504 469 aa12.11□□□□□ -0.47
SNF8-207ENST00000509995 SMARCD2Q92925 531 aa12.11□□□□□ -0.47
SNF8-207ENST00000509995 ZFP42Q96MM3 310 aa12.11□□□□□ -0.47
SNF8-207ENST00000509995 TTPALQ9BTX7 342 aa12.11□□□□□ -0.47
SNF8-207ENST00000509995 MIOSQ9NXC5 875 aa12.11□□□□□ -0.47
SNF8-207ENST00000509995 PTPN13Q12923 2485 aa12.1□□□□□ -0.47
SNF8-207ENST00000509995 ERICH2A1L162 156 aa12.1□□□□□ -0.47
SNF8-207ENST00000509995 MYBPHLA2RUH7 354 aa12.1□□□□□ -0.47
SNF8-207ENST00000509995 PATE3B3GLJ2 98 aa12.1□□□□□ -0.47
SNF8-207ENST00000509995 FAM86B1E9PN63 330 aa12.1□□□□□ -0.47
SNF8-207ENST00000509995 SPECC1L-ADORA2AF8WAN1 911 aa12.1□□□□□ -0.47
SNF8-207ENST00000509995 FAM86B2P0C5J1 330 aa12.1□□□□□ -0.47
SNF8-207ENST00000509995 SREBF1P36956 1147 aa12.1□□□□□ -0.47
SNF8-207ENST00000509995 KPNA1P52294 538 aaPredicted RBP12.1□□□□□ -0.47
SNF8-207ENST00000509995 RAB33AQ14088 237 aa12.1□□□□□ -0.47
SNF8-207ENST00000509995 KARSQ15046 597 aaKnown RBP12.1□□□□□ -0.47
SNF8-207ENST00000509995 TARBP2Q15633 366 aaKnown RBP12.1□□□□□ -0.47
SNF8-207ENST00000509995 PKN3Q6P5Z2 889 aa12.1□□□□□ -0.47
SNF8-207ENST00000509995 PLA2G4DQ86XP0 818 aa12.1□□□□□ -0.47
SNF8-207ENST00000509995 MFSD6LQ8IWD5 586 aa12.1□□□□□ -0.47
SNF8-207ENST00000509995 CNNM3Q8NE01 707 aa12.1□□□□□ -0.47
SNF8-207ENST00000509995 FAM200AQ8TCP9 573 aa12.1□□□□□ -0.47
SNF8-207ENST00000509995 TCEAL4Q96EI5 215 aa12.1□□□□□ -0.47
SNF8-207ENST00000509995 NLRP4Q96MN2 994 aa12.1□□□□□ -0.47
SNF8-207ENST00000509995 ANO3Q9BYT9 981 aa12.1□□□□□ -0.47
SNF8-207ENST00000509995 IFT122Q9HBG6 1241 aa12.1□□□□□ -0.47
SNF8-207ENST00000509995 NRBP2Q9NSY0 501 aa12.1□□□□□ -0.47
SNF8-207ENST00000509995 TBC1D22BQ9NU19 505 aa12.1□□□□□ -0.47
SNF8-207ENST00000509995 IPPQ9Y573 584 aa12.1□□□□□ -0.47
SNF8-207ENST00000509995 IGLV3-22A0A075B6J6 115 aa12.09□□□□□ -0.47
SNF8-207ENST00000509995 IGKV6-21A0A0C4DH24 114 aa12.09□□□□□ -0.47
SNF8-207ENST00000509995 DCLK1O15075 740 aa12.09□□□□□ -0.47
SNF8-207ENST00000509995 TADA2AO75478 443 aa12.09□□□□□ -0.47
SNF8-207ENST00000509995 PLEKHA8P1O95397 391 aa12.09□□□□□ -0.47
SNF8-207ENST00000509995 HOXA11P31270 313 aaPredicted RBP12.09□□□□□ -0.47
SNF8-207ENST00000509995 ZNF76P36508 570 aa12.09□□□□□ -0.47
SNF8-207ENST00000509995 VIPR2P41587 438 aa12.09□□□□□ -0.47
SNF8-207ENST00000509995 DNM2P50570 870 aa12.09□□□□□ -0.47
SNF8-207ENST00000509995 IRX4P78413 519 aa12.09□□□□□ -0.47
SNF8-207ENST00000509995 PON2Q15165 354 aa12.09□□□□□ -0.47
SNF8-207ENST00000509995 ZNF423Q2M1K9 1284 aa12.09□□□□□ -0.47
SNF8-207ENST00000509995 PIP4P1Q86T03 277 aa12.09□□□□□ -0.47
SNF8-207ENST00000509995 RALGPS2Q86X27 583 aaPredicted RBP12.09□□□□□ -0.47
SNF8-207ENST00000509995 CEP57Q86XR8 500 aa12.09□□□□□ -0.47
SNF8-207ENST00000509995 KSR1Q8IVT5 923 aa12.09□□□□□ -0.47
SNF8-207ENST00000509995 CTCFLQ8NI51 663 aaPredicted RBP12.09□□□□□ -0.47
SNF8-207ENST00000509995 MDM1Q8TC05 714 aa12.09□□□□□ -0.47
SNF8-207ENST00000509995 RABGGTAQ92696 567 aa12.09□□□□□ -0.47
SNF8-207ENST00000509995 CRELD1Q96HD1 420 aa12.09□□□□□ -0.47
SNF8-207ENST00000509995 MAP3K14Q99558 947 aa12.09□□□□□ -0.47
SNF8-207ENST00000509995 LZTS2Q9BRK4 669 aa12.09□□□□□ -0.47
SNF8-207ENST00000509995 ZNF577Q9BSK1 485 aa12.09□□□□□ -0.47
SNF8-207ENST00000509995 DSCC1Q9BVC3 393 aa12.09□□□□□ -0.47
SNF8-207ENST00000509995 RNF39Q9H2S5 420 aa12.09□□□□□ -0.47
SNF8-207ENST00000509995 SLC8A2Q9UPR5 921 aa12.09□□□□□ -0.47
SNF8-207ENST00000509995 SAMM50Q9Y512 469 aa12.09□□□□□ -0.47
SNF8-207ENST00000509995 WDR64B1ANS9 1081 aa12.08□□□□□ -0.48
SNF8-207ENST00000509995 MICAL2O94851 1124 aa12.08□□□□□ -0.48
SNF8-207ENST00000509995 FOSP01100 380 aaPredicted RBP12.08□□□□□ -0.48
SNF8-207ENST00000509995 PTPN2P17706 415 aa12.08□□□□□ -0.48
SNF8-207ENST00000509995 OR1D2P34982 312 aa12.08□□□□□ -0.48
SNF8-207ENST00000509995 CCR2P41597 374 aa12.08□□□□□ -0.48
SNF8-207ENST00000509995 HSP90AA2PQ14568 343 aaPredicted RBP12.08□□□□□ -0.48
SNF8-207ENST00000509995 UGCGQ16739 394 aa12.08□□□□□ -0.48
SNF8-207ENST00000509995 FAM171A1Q5VUB5 890 aa12.08□□□□□ -0.48
SNF8-207ENST00000509995 SRBD1Q8N5C6 995 aaKnown RBP12.08□□□□□ -0.48
SNF8-207ENST00000509995 CAMKK1Q8N5S9 505 aa12.08□□□□□ -0.48
SNF8-207ENST00000509995 HASPINQ8TF76 798 aa12.08□□□□□ -0.48
SNF8-207ENST00000509995 ZSWIM3Q96MP5 696 aa12.08□□□□□ -0.48
SNF8-207ENST00000509995 CORO1BQ9BR76 489 aa12.08□□□□□ -0.48
SNF8-207ENST00000509995 TRPV4Q9HBA0 871 aa12.08□□□□□ -0.48
SNF8-207ENST00000509995 SUCLA2Q9P2R7 463 aaPredicted RBP12.08□□□□□ -0.48
SNF8-207ENST00000509995 CACNG4Q9UBN1 327 aa12.08□□□□□ -0.48
SNF8-207ENST00000509995 PIEZO2Q9H5I5 2752 aa12.08□□□□□ -0.48
SNF8-207ENST00000509995 CCDC194A0A1B0GVG4 234 aa12.07□□□□□ -0.48
SNF8-207ENST00000509995 hCG_1642624A0A1W2PR95 340 aa12.07□□□□□ -0.48
SNF8-207ENST00000509995 HEPACAM2A8MVW5 462 aa12.07□□□□□ -0.48
SNF8-207ENST00000509995 UPK3BL1B0FP48 263 aa12.07□□□□□ -0.48
SNF8-207ENST00000509995 UPK3BL2E5RIL1 263 aa12.07□□□□□ -0.48
SNF8-207ENST00000509995 J3QKU1 62 aa12.07□□□□□ -0.48
SNF8-207ENST00000509995 ZNF197O14709 1029 aa12.07□□□□□ -0.48
SNF8-207ENST00000509995 CHADO15335 359 aa12.07□□□□□ -0.48
SNF8-207ENST00000509995 MEFVO15553 781 aaPredicted RBP12.07□□□□□ -0.48
SNF8-207ENST00000509995 ARHGAP6O43182 974 aa12.07□□□□□ -0.48
SNF8-207ENST00000509995 PDE1AP54750 535 aa12.07□□□□□ -0.48
SNF8-207ENST00000509995 FCHO2Q0JRZ9 810 aa12.07□□□□□ -0.48
SNF8-207ENST00000509995 GRIK3Q13003 919 aa12.07□□□□□ -0.48
SNF8-207ENST00000509995 TRDNQ13061 729 aa12.07□□□□□ -0.48
SNF8-207ENST00000509995 SART3Q15020 963 aaKnown RBP12.07□□□□□ -0.48
SNF8-207ENST00000509995 MTERF2Q49AM1 385 aa12.07□□□□□ -0.48
SNF8-207ENST00000509995 PMS2CLQ68D20 193 aa12.07□□□□□ -0.48
SNF8-207ENST00000509995 PDXDC1Q6P996 788 aa12.07□□□□□ -0.48
SNF8-207ENST00000509995 PDZD4Q76G19 769 aaPredicted RBP12.07□□□□□ -0.48
SNF8-207ENST00000509995 HEATR3Q7Z4Q2 680 aa12.07□□□□□ -0.48
SNF8-207ENST00000509995 TEX2Q8IWB9 1127 aa12.07□□□□□ -0.48
SNF8-207ENST00000509995 YAF2Q8IY57 180 aa12.07□□□□□ -0.48
SNF8-207ENST00000509995 CMTR1Q8N1G2 835 aaKnown RBP12.07□□□□□ -0.48
SNF8-207ENST00000509995 GSTCDQ8NEC7 633 aa12.07□□□□□ -0.48
SNF8-207ENST00000509995 HHIPQ96QV1 700 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms