RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 WDR44Q5JSH3 913 aa16.02■□□□□ 0.15
PHF3-209ENST00000509330 C8orf74Q6P047 294 aa16.02■□□□□ 0.15
PHF3-209ENST00000509330 AADACL2Q6P093 401 aa16.02■□□□□ 0.15
PHF3-209ENST00000509330 TMEM192Q8IY95 271 aa16.02■□□□□ 0.15
PHF3-209ENST00000509330 C2orf69Q8N8R5 385 aa16.02■□□□□ 0.15
PHF3-209ENST00000509330 TMEM174Q8WUU8 243 aa16.02■□□□□ 0.15
PHF3-209ENST00000509330 SMARCAD1Q9H4L7 1026 aa16.02■□□□□ 0.15
PHF3-209ENST00000509330 NMRK2Q9NPI5 230 aa16.02■□□□□ 0.15
PHF3-209ENST00000509330 AKT3Q9Y243 479 aa16.02■□□□□ 0.15
PHF3-209ENST00000509330 ZNFX1Q9P2E3 1918 aaKnown RBP16.02■□□□□ 0.15
PHF3-209ENST00000509330 GRIN3BO60391 1043 aa16.01■□□□□ 0.15
PHF3-209ENST00000509330 CFHP08603 1231 aa16.01■□□□□ 0.15
PHF3-209ENST00000509330 IQCF3P0C7M6 154 aa16.01■□□□□ 0.15
PHF3-209ENST00000509330 TMEM253P0C7T8 217 aa16.01■□□□□ 0.15
PHF3-209ENST00000509330 COPB2P35606 906 aa16.01■□□□□ 0.15
PHF3-209ENST00000509330 TMEM62Q0P6H9 643 aa16.01■□□□□ 0.15
PHF3-209ENST00000509330 GRM1Q13255 1194 aa16.01■□□□□ 0.15
PHF3-209ENST00000509330 MESDQ14696 234 aa16.01■□□□□ 0.15
PHF3-209ENST00000509330 IFI16Q16666 785 aaKnown RBP16.01■□□□□ 0.15
PHF3-209ENST00000509330 IER5Q5VY09 327 aa16.01■□□□□ 0.15
PHF3-209ENST00000509330 EEF1DP3Q658K8 133 aa16.01■□□□□ 0.15
PHF3-209ENST00000509330 SCARA5Q6ZMJ2 495 aa16.01■□□□□ 0.15
PHF3-209ENST00000509330 ZBTB8OSQ8IWT0 167 aa16.01■□□□□ 0.15
PHF3-209ENST00000509330 COQ4Q9Y3A0 265 aa16.01■□□□□ 0.15
PHF3-209ENST00000509330 CST3P01034 146 aaPredicted RBP16.01■□□□□ 0.15
PHF3-209ENST00000509330 C4BPAP04003 597 aaKnown RBP16.01■□□□□ 0.15
PHF3-209ENST00000509330 PRLRP16471 622 aa16.01■□□□□ 0.15
PHF3-209ENST00000509330 CD58P19256 250 aa16.01■□□□□ 0.15
PHF3-209ENST00000509330 TFAMQ00059 246 aaKnown RBP16.01■□□□□ 0.15
PHF3-209ENST00000509330 ZACNQ401N2 412 aa16.01■□□□□ 0.15
PHF3-209ENST00000509330 KCNV1Q6PIU1 500 aa16.01■□□□□ 0.15
PHF3-209ENST00000509330 CPA5Q8WXQ8 436 aa16.01■□□□□ 0.15
PHF3-209ENST00000509330 SCLT1Q96NL6 688 aa16.01■□□□□ 0.15
PHF3-209ENST00000509330 MRPL4Q9BYD3 311 aaKnown RBP16.01■□□□□ 0.15
PHF3-209ENST00000509330 ANKRD62A6NC57 917 aa16■□□□□ 0.15
PHF3-209ENST00000509330 LGR5O75473 907 aa16■□□□□ 0.15
PHF3-209ENST00000509330 SNAI1O95863 264 aaPredicted RBP16■□□□□ 0.15
PHF3-209ENST00000509330 GYS2P54840 703 aa16■□□□□ 0.15
PHF3-209ENST00000509330 TRADDQ15628 312 aa16■□□□□ 0.15
PHF3-209ENST00000509330 ZNF568Q3ZCX4 644 aa16■□□□□ 0.15
PHF3-209ENST00000509330 SLFN12LQ6IEE8 588 aa16■□□□□ 0.15
PHF3-209ENST00000509330 TMEM270Q6UE05 265 aa16■□□□□ 0.15
PHF3-209ENST00000509330 NT5DC3Q86UY8 548 aa16■□□□□ 0.15
PHF3-209ENST00000509330 MAF1Q9H063 256 aa16■□□□□ 0.15
PHF3-209ENST00000509330 TSKSQ9UJT2 592 aa16■□□□□ 0.15
PHF3-209ENST00000509330 FGFR4P22455 802 aa16■□□□□ 0.15
PHF3-209ENST00000509330 HUNKP57058 714 aa16■□□□□ 0.15
PHF3-209ENST00000509330 FAM193AP78312 1265 aa16■□□□□ 0.15
PHF3-209ENST00000509330 PLPPR4Q7Z2D5 763 aa16■□□□□ 0.15
PHF3-209ENST00000509330 ZNF653Q96CK0 615 aa16■□□□□ 0.15
PHF3-209ENST00000509330 CPB2Q96IY4 423 aa16■□□□□ 0.15
PHF3-209ENST00000509330 RPGRIP1Q96KN7 1286 aa16■□□□□ 0.15
PHF3-209ENST00000509330 ERAP1Q9NZ08 941 aa16■□□□□ 0.15
PHF3-209ENST00000509330 A0A087WZ62 844 aa15.99■□□□□ 0.15
PHF3-209ENST00000509330 ADCY6O43306 1168 aa15.99■□□□□ 0.15
PHF3-209ENST00000509330 ITGA4P13612 1032 aa15.99■□□□□ 0.15
PHF3-209ENST00000509330 MARCKSL1P49006 195 aa15.99■□□□□ 0.15
PHF3-209ENST00000509330 SPRYD7Q5W111 196 aa15.99■□□□□ 0.15
PHF3-209ENST00000509330 IFT81Q8WYA0 676 aa15.99■□□□□ 0.15
PHF3-209ENST00000509330 ACO2Q99798 780 aaKnown RBP15.99■□□□□ 0.15
PHF3-209ENST00000509330 FDXACB1Q9BRP7 624 aaPredicted RBP15.99■□□□□ 0.15
PHF3-209ENST00000509330 AMFRQ9UKV5 643 aa15.99■□□□□ 0.15
PHF3-209ENST00000509330 NUB1Q9Y5A7 615 aa15.99■□□□□ 0.15
PHF3-209ENST00000509330 PCDHB4Q9Y5E5 795 aa15.99■□□□□ 0.15
PHF3-209ENST00000509330 STYXL1Q9Y6J8 313 aa15.99■□□□□ 0.15
PHF3-209ENST00000509330 LRRC37A2A6NM11 1700 aa15.99■□□□□ 0.15
PHF3-209ENST00000509330 EVPLQ92817 2033 aa15.99■□□□□ 0.15
PHF3-209ENST00000509330 A0A0U1RQG5 324 aaPredicted RBP15.99■□□□□ 0.15
PHF3-209ENST00000509330 BTNL10A8MVZ5 291 aa15.99■□□□□ 0.15
PHF3-209ENST00000509330 CCDC70Q6NSX1 233 aa15.99■□□□□ 0.15
PHF3-209ENST00000509330 SHCBP1Q8NEM2 672 aa15.99■□□□□ 0.15
PHF3-209ENST00000509330 NPLOC4Q8TAT6 608 aa15.99■□□□□ 0.15
PHF3-209ENST00000509330 NOC2LQ9Y3T9 749 aaKnown RBP15.99■□□□□ 0.15
PHF3-209ENST00000509330 ADGRA2Q96PE1 1338 aa15.99■□□□□ 0.15
PHF3-209ENST00000509330 CNTNAP2Q9UHC6 1331 aa15.99■□□□□ 0.15
PHF3-209ENST00000509330 TOM1L1O75674 476 aa15.99■□□□□ 0.15
PHF3-209ENST00000509330 ANXA13P27216 316 aa15.99■□□□□ 0.15
PHF3-209ENST00000509330 NOP14P78316 857 aaKnown RBP15.99■□□□□ 0.15
PHF3-209ENST00000509330 NCOA4Q13772 614 aa15.99■□□□□ 0.15
PHF3-209ENST00000509330 CASP8Q14790 479 aa15.99■□□□□ 0.15
PHF3-209ENST00000509330 DAB2IPQ5VWQ8 1189 aa15.99■□□□□ 0.15
PHF3-209ENST00000509330 MAMDC4Q6UXC1 1216 aa15.99■□□□□ 0.15
PHF3-209ENST00000509330 C15orf39Q6ZRI6 1047 aa15.99■□□□□ 0.15
PHF3-209ENST00000509330 TCP11Q8WWU5 503 aa15.99■□□□□ 0.15
PHF3-209ENST00000509330 TMEM134Q9H6X4 195 aa15.99■□□□□ 0.15
PHF3-209ENST00000509330 KIAA1586Q9HCI6 787 aa15.99■□□□□ 0.15
PHF3-209ENST00000509330 L1RE1Q9UN81 338 aa15.99■□□□□ 0.15
PHF3-209ENST00000509330 HBP1O60381 514 aa15.98■□□□□ 0.15
PHF3-209ENST00000509330 GH1P01241 217 aa15.98■□□□□ 0.15
PHF3-209ENST00000509330 GLI1P08151 1106 aa15.98■□□□□ 0.15
PHF3-209ENST00000509330 KRT19P08727 400 aa15.98■□□□□ 0.15
PHF3-209ENST00000509330 SMPD1P17405 629 aa15.98■□□□□ 0.15
PHF3-209ENST00000509330 GUCY2DQ02846 1103 aa15.98■□□□□ 0.15
PHF3-209ENST00000509330 MXD4Q14582 209 aaPredicted RBP15.98■□□□□ 0.15
PHF3-209ENST00000509330 SMC1AQ14683 1233 aaKnown RBP15.98■□□□□ 0.15
PHF3-209ENST00000509330 CST9Q5W186 159 aa15.98■□□□□ 0.15
PHF3-209ENST00000509330 TRIM7Q9C029 511 aa15.98■□□□□ 0.15
PHF3-209ENST00000509330 CCDC113Q9H0I3 377 aa15.98■□□□□ 0.15
PHF3-209ENST00000509330 DDX47Q9H0S4 455 aaKnown RBP15.98■□□□□ 0.15
PHF3-209ENST00000509330 CXCL8P10145 99 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms