RNA–Protein interactions for RNA: ENST00000509013.2

SSBP2-211, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-211ENST00000509013 ZNF410Q86VK4 478 aa6.73□□□□□ -1.33
SSBP2-211ENST00000509013 RHPN2Q8IUC4 686 aa6.73□□□□□ -1.33
SSBP2-211ENST00000509013 CEP57L1Q8IYX8 460 aa6.73□□□□□ -1.33
SSBP2-211ENST00000509013 MAML2Q8IZL2 1156 aaPredicted RBP6.73□□□□□ -1.33
SSBP2-211ENST00000509013 ST13P5Q8NFI4 369 aaPredicted RBP6.73□□□□□ -1.33
SSBP2-211ENST00000509013 PJA1Q8NG27 643 aa6.73□□□□□ -1.33
SSBP2-211ENST00000509013 CRYGNQ8WXF5 182 aa6.73□□□□□ -1.33
SSBP2-211ENST00000509013 ERCC4Q92889 916 aaPredicted RBP6.73□□□□□ -1.33
SSBP2-211ENST00000509013 SECISBP2LQ93073 1101 aaKnown RBP6.73□□□□□ -1.33
SSBP2-211ENST00000509013 SHDQ96IW2 340 aa6.73□□□□□ -1.33
SSBP2-211ENST00000509013 ZNF830Q96NB3 372 aaPredicted RBP6.73□□□□□ -1.33
SSBP2-211ENST00000509013 RPS6KC1Q96S38 1066 aa6.73□□□□□ -1.33
SSBP2-211ENST00000509013 KCNK17Q96T54 332 aa6.73□□□□□ -1.33
SSBP2-211ENST00000509013 RNF26Q9BY78 433 aaPredicted RBP6.73□□□□□ -1.33
SSBP2-211ENST00000509013 NAT10Q9H0A0 1025 aaKnown RBP6.73□□□□□ -1.33
SSBP2-211ENST00000509013 FOXP1Q9H334 677 aaPredicted RBP6.73□□□□□ -1.33
SSBP2-211ENST00000509013 RSAD1Q9HA92 442 aa6.73□□□□□ -1.33
SSBP2-211ENST00000509013 BRMS1Q9HCU9 246 aa6.73□□□□□ -1.33
SSBP2-211ENST00000509013 C6orf50Q9HD87 102 aa6.73□□□□□ -1.33
SSBP2-211ENST00000509013 SLC2A4RGQ9NR83 387 aa6.73□□□□□ -1.33
SSBP2-211ENST00000509013 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.73□□□□□ -1.331e-9■■■■■ 44.8
SSBP2-211ENST00000509013 KANSL3Q9P2N6 904 aa6.73□□□□□ -1.33
SSBP2-211ENST00000509013 PRG3Q9Y2Y8 225 aaPredicted RBP6.73□□□□□ -1.33
SSBP2-211ENST00000509013 PCDHB2Q9Y5E7 798 aa6.73□□□□□ -1.33
SSBP2-211ENST00000509013 NCOR2Q9Y618 2525 aa6.73□□□□□ -1.33
SSBP2-211ENST00000509013 IGKV6-21A0A0C4DH24 114 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 KANSL1LA0AUZ9 987 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 PRR5-ARHGAP8B1AHC4 643 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 ANHXE9PGG2 379 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 SPTLC1O15269 473 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 MSH4O15457 936 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 AP5Z1O43299 807 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 GAS2O43903 313 aaKnown RBP6.72□□□□□ -1.33
SSBP2-211ENST00000509013 ZNF500O60304 480 aaPredicted RBP6.72□□□□□ -1.33
SSBP2-211ENST00000509013 GAS7O60861 476 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 LRRN2O75325 713 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 CIITAP33076 1130 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 KRT2P35908 639 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 OR1G1P47890 313 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 GLUD2P49448 558 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 ZNF75DP51815 510 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 AFF1P51825 1210 aaKnown RBP6.72□□□□□ -1.33
SSBP2-211ENST00000509013 JAK3P52333 1124 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 STARD6P59095 220 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 TPM4P67936 248 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 GPC5P78333 572 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 FOXK1P85037 733 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 ARHGAP8P85298 464 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 DSG1Q02413 1049 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 CSTF1Q05048 431 aaKnown RBP6.72□□□□□ -1.33
SSBP2-211ENST00000509013 HTR4Q13639 388 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 PTPAQ15257 358 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 TARBP2Q15633 366 aaKnown RBP6.72□□□□□ -1.33
SSBP2-211ENST00000509013 PFKFB3Q16875 520 aaPredicted RBP6.72□□□□□ -1.33
SSBP2-211ENST00000509013 ZNF528Q3MIS6 628 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 RILPL1Q5EBL4 403 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 XKR3Q5GH77 459 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 AXDND1Q5T1B0 1012 aaPredicted RBP6.72□□□□□ -1.33
SSBP2-211ENST00000509013 KIAA0319Q5VV43 1072 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 PALB2Q86YC2 1186 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 KSR1Q8IVT5 923 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 PLPP6Q8IY26 295 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 REXO1Q8N1G1 1221 aaKnown RBP6.72□□□□□ -1.33
SSBP2-211ENST00000509013 KRI1Q8N9T8 703 aaKnown RBP6.72□□□□□ -1.33
SSBP2-211ENST00000509013 CCDC12Q8WUD4 166 aaPredicted RBP6.72□□□□□ -1.33
SSBP2-211ENST00000509013 HDAC7Q8WUI4 952 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 ATRIPQ8WXE1 791 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 LENG9Q96B70 501 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 ZNF707Q96C28 371 aaPredicted RBP6.72□□□□□ -1.33
SSBP2-211ENST00000509013 NLRP4Q96MN2 994 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 CLIC6Q96NY7 704 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 SH2D3AQ9BRG2 576 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 HERC2P3Q9BVR0 1158 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 NIFKQ9BYG3 293 aaKnown RBP6.72□□□□□ -1.33
SSBP2-211ENST00000509013 BCO2Q9BYV7 579 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 ZMYND12Q9H0C1 365 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 NT5C3AQ9H0P0 336 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 PLEKHA4Q9H4M7 779 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 RXFP1Q9HBX9 757 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 SPATA6Q9NWH7 488 aaPredicted RBP6.72□□□□□ -1.33
SSBP2-211ENST00000509013 ZDHHC7Q9NXF8 308 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 FAM13BQ9NYF5 915 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 VPS54Q9P1Q0 977 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 KIAA1468Q9P260 1216 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 SUCLA2Q9P2R7 463 aaPredicted RBP6.72□□□□□ -1.33
SSBP2-211ENST00000509013 SEPT9Q9UHD8 586 aaPredicted RBP6.72□□□□□ -1.33
SSBP2-211ENST00000509013 FBXO4Q9UKT5 387 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 CDV3Q9UKY7 258 aaKnown RBP6.72□□□□□ -1.33
SSBP2-211ENST00000509013 NUMBLQ9Y6R0 609 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 EP300Q09472 2414 aaPredicted RBP6.72□□□□□ -1.33
SSBP2-211ENST00000509013 CNTNAP2Q9UHC6 1331 aa6.72□□□□□ -1.33
SSBP2-211ENST00000509013 EPG5Q9HCE0 2579 aa6.71□□□□□ -1.33
SSBP2-211ENST00000509013 A0A087WWV3 80 aa6.71□□□□□ -1.34
SSBP2-211ENST00000509013 ESYT2A0FGR8 921 aa6.71□□□□□ -1.34
SSBP2-211ENST00000509013 TMEM150BA6NC51 233 aa6.71□□□□□ -1.34
SSBP2-211ENST00000509013 FAM170BA6NMN3 283 aa6.71□□□□□ -1.34
SSBP2-211ENST00000509013 BIN1O00499 593 aa6.71□□□□□ -1.34
SSBP2-211ENST00000509013 ADAMTS3O15072 1205 aa6.71□□□□□ -1.34
SSBP2-211ENST00000509013 TGM5O43548 720 aa6.71□□□□□ -1.34
SSBP2-211ENST00000509013 MAFO75444 373 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms