RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 NMT1P30419 496 aaKnown RBP9.51□□□□□ -0.89
SNCA-211ENST00000508895 PPM1AP35813 382 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 NDUFA8P51970 172 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 ZNF131P52739 623 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 COASYQ13057 564 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 SMAD4Q13485 552 aaKnown RBP9.51□□□□□ -0.89
SNCA-211ENST00000508895 SMAD2Q15796 467 aaKnown RBP9.51□□□□□ -0.89
SNCA-211ENST00000508895 AAK1Q2M2I8 961 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 KIAA0319Q5VV43 1072 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 SCARA3Q6AZY7 606 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 ANKRD54Q6NXT1 300 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 ALKAL1Q6UXT8 129 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 TMEM184AQ6ZMB5 413 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 ZBTB8OSQ8IWT0 167 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 FSIP1Q8NA03 581 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 ZSWIM2Q8NEG5 633 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 URGCPQ8TCY9 931 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 SUSD6Q92537 303 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 TMEM169Q96HH4 297 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 DRC1Q96MC2 740 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 KLHL5Q96PQ7 755 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 NTPCRQ9BSD7 190 aaKnown RBP9.51□□□□□ -0.89
SNCA-211ENST00000508895 C2orf40Q9H1Z8 148 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 TMEM134Q9H6X4 195 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 KMT5AQ9NQR1 393 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 RNF216Q9NWF9 866 aaPredicted RBP9.51□□□□□ -0.89
SNCA-211ENST00000508895 FAM13BQ9NYF5 915 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 KCNH3Q9ULD8 1083 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 TNFSF13BQ9Y275 285 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 GIT1Q9Y2X7 761 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 HCFC2Q9Y5Z7 792 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 CACNA1GO43497 2377 aa9.51□□□□□ -0.89
SNCA-211ENST00000508895 ANKRD63C9JTQ0 380 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 I3L4J1 428 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 FAM189A1O60320 539 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 KIF4AO95239 1232 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 ALDH2P05091 517 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 SPATA31D3P0C874 917 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 HARSP12081 509 aaKnown RBP9.5□□□□□ -0.89
SNCA-211ENST00000508895 SP100P23497 879 aaPredicted RBP9.5□□□□□ -0.89
SNCA-211ENST00000508895 CA8P35219 290 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 TNFSF9P41273 254 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 GUCY2FP51841 1108 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 NCKAP1LP55160 1127 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 KRT17Q04695 432 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 SPAG1Q07617 926 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 KCNA1Q09470 495 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 SMC1AQ14683 1233 aaKnown RBP9.5□□□□□ -0.89
SNCA-211ENST00000508895 PCBP1Q15365 356 aaKnown RBP eCLIP9.5□□□□□ -0.89
SNCA-211ENST00000508895 CSPP1Q1MSJ5 1256 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 TPRNQ4KMQ1 711 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 ZC2HC1CQ53FD0 456 aaPredicted RBP9.5□□□□□ -0.89
SNCA-211ENST00000508895 RTP2Q5QGT7 225 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 PRSS55Q6UWB4 352 aaPredicted RBP9.5□□□□□ -0.89
SNCA-211ENST00000508895 CLEC17AQ6ZS10 378 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 SPATA31D4Q6ZUB0 917 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 GJD3Q8N144 294 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 CNNM3Q8NE01 707 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 GLIS3Q8NEA6 775 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 STAMQ92783 540 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 C18orf25Q96B23 403 aaPredicted RBP9.5□□□□□ -0.89
SNCA-211ENST00000508895 DNAJC19Q96DA6 116 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 FAM84AQ96KN4 292 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 IFT74Q96LB3 600 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 PPP1R10Q96QC0 940 aaKnown RBP9.5□□□□□ -0.89
SNCA-211ENST00000508895 TMEM175Q9BSA9 504 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 LRFN3Q9BTN0 628 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 HERC2P3Q9BVR0 1158 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 TIPINQ9BVW5 301 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 TRIM6Q9C030 488 aaPredicted RBP9.5□□□□□ -0.89
SNCA-211ENST00000508895 TNMDQ9H2S6 317 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 CUEDC2Q9H467 287 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 KBTBD4Q9NVX7 518 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 PUF60Q9UHX1 559 aaKnown RBP9.5□□□□□ -0.89
SNCA-211ENST00000508895 ODF2LQ9ULJ1 636 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 TRIOO75962 3097 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 PHLPP2Q6ZVD8 1323 aa9.5□□□□□ -0.89
SNCA-211ENST00000508895 SMIM28A0A1B0GU29 152 aa9.49□□□□□ -0.89
SNCA-211ENST00000508895 FRMD3A2A2Y4 597 aa9.49□□□□□ -0.89
SNCA-211ENST00000508895 GADD45BO75293 160 aaPredicted RBP9.49□□□□□ -0.89
SNCA-211ENST00000508895 SOD2P04179 222 aa9.49□□□□□ -0.89
SNCA-211ENST00000508895 CASP1P29466 404 aa9.49□□□□□ -0.89
SNCA-211ENST00000508895 GRM5P41594 1212 aa9.49□□□□□ -0.89
SNCA-211ENST00000508895 SYKP43405 635 aa9.49□□□□□ -0.89
SNCA-211ENST00000508895 BRCC3P46736 316 aa9.49□□□□□ -0.89
SNCA-211ENST00000508895 CLCN4P51793 760 aa9.49□□□□□ -0.89
SNCA-211ENST00000508895 CASP5P51878 434 aa9.49□□□□□ -0.89
SNCA-211ENST00000508895 WNT7BP56706 349 aa9.49□□□□□ -0.89
SNCA-211ENST00000508895 GRIK3Q13003 919 aa9.49□□□□□ -0.89
SNCA-211ENST00000508895 DMP1Q13316 513 aaPredicted RBP9.49□□□□□ -0.89
SNCA-211ENST00000508895 PPP2R5AQ15172 486 aa9.49□□□□□ -0.89
SNCA-211ENST00000508895 SLC10A6Q3KNW5 377 aa9.49□□□□□ -0.89
SNCA-211ENST00000508895 XKR4Q5GH76 650 aa9.49□□□□□ -0.89
SNCA-211ENST00000508895 FUT10Q6P4F1 479 aa9.49□□□□□ -0.89
SNCA-211ENST00000508895 RSPO2Q6UXX9 243 aaPredicted RBP9.49□□□□□ -0.89
SNCA-211ENST00000508895 SV2BQ7L1I2 683 aa9.49□□□□□ -0.89
SNCA-211ENST00000508895 DYMQ7RTS9 669 aa9.49□□□□□ -0.89
SNCA-211ENST00000508895 HAUS6Q7Z4H7 955 aa9.49□□□□□ -0.89
SNCA-211ENST00000508895 GLYCTKQ8IVS8 523 aa9.49□□□□□ -0.89
SNCA-211ENST00000508895 GRAMD1CQ8IYS0 662 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms