RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 CCDC94Q9BW85 323 aaPredicted RBP11.09□□□□□ -0.63
UBE2D3-227ENST00000508818 MRPL4Q9BYD3 311 aaKnown RBP11.09□□□□□ -0.63
UBE2D3-227ENST00000508818 NT5C3AQ9H0P0 336 aa11.09□□□□□ -0.63
UBE2D3-227ENST00000508818 MFSD1Q9H3U5 465 aa11.09□□□□□ -0.63
UBE2D3-227ENST00000508818 PLEKHA4Q9H4M7 779 aa11.09□□□□□ -0.63
UBE2D3-227ENST00000508818 TOPORSQ9NS56 1045 aaPredicted RBP11.09□□□□□ -0.63
UBE2D3-227ENST00000508818 FNIP2Q9P278 1114 aa11.09□□□□□ -0.63
UBE2D3-227ENST00000508818 TDRD15B5MCY1 1934 aaKnown RBP11.09□□□□□ -0.63
UBE2D3-227ENST00000508818 C5orf42Q9H799 3197 aa11.08□□□□□ -0.64
UBE2D3-227ENST00000508818 VWA3AA6NCI4 1184 aa11.08□□□□□ -0.64
UBE2D3-227ENST00000508818 TGM5O43548 720 aa11.08□□□□□ -0.64
UBE2D3-227ENST00000508818 EFEMP2O95967 443 aa11.08□□□□□ -0.64
UBE2D3-227ENST00000508818 C1RP00736 705 aa11.08□□□□□ -0.64
UBE2D3-227ENST00000508818 RPL17P18621 184 aaKnown RBP11.08□□□□□ -0.64
UBE2D3-227ENST00000508818 NPTX2P47972 431 aa11.08□□□□□ -0.64
UBE2D3-227ENST00000508818 IL17AQ16552 155 aa11.08□□□□□ -0.64
UBE2D3-227ENST00000508818 ZNF568Q3ZCX4 644 aa11.08□□□□□ -0.64
UBE2D3-227ENST00000508818 NT5DC1Q5TFE4 455 aa11.08□□□□□ -0.64
UBE2D3-227ENST00000508818 RINT1Q6NUQ1 792 aa11.08□□□□□ -0.64
UBE2D3-227ENST00000508818 DCLRE1AQ6PJP8 1040 aa11.08□□□□□ -0.64
UBE2D3-227ENST00000508818 RNF168Q8IYW5 571 aaPredicted RBP11.08□□□□□ -0.64
UBE2D3-227ENST00000508818 KCTD17Q8N5Z5 321 aa11.08□□□□□ -0.64
UBE2D3-227ENST00000508818 RASSF8Q8NHQ8 419 aa11.08□□□□□ -0.64
UBE2D3-227ENST00000508818 PLIN2Q99541 437 aa11.08□□□□□ -0.64
UBE2D3-227ENST00000508818 PAAF1Q9BRP4 392 aa11.08□□□□□ -0.64
UBE2D3-227ENST00000508818 RUSC1Q9BVN2 902 aa11.08□□□□□ -0.64
UBE2D3-227ENST00000508818 TIPINQ9BVW5 301 aa11.08□□□□□ -0.64
UBE2D3-227ENST00000508818 TMEM134Q9H6X4 195 aa11.08□□□□□ -0.64
UBE2D3-227ENST00000508818 C17orf75Q9HAS0 396 aa11.08□□□□□ -0.64
UBE2D3-227ENST00000508818 CACNG4Q9UBN1 327 aa11.08□□□□□ -0.64
UBE2D3-227ENST00000508818 TNFSF13BQ9Y275 285 aa11.08□□□□□ -0.64
UBE2D3-227ENST00000508818 SFI1A8K8P3 1242 aa11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 PTGESO14684 152 aa11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 TRAPPC3O43617 180 aa11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 RFPL2O75678 378 aa11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 B3GAT3O94766 335 aa11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 KIF4AO95239 1232 aa11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 BRD1O95696 1058 aa11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 AVPR2P30518 371 aa11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 UBA7P41226 1012 aa11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 MATR3P43243 847 aaKnown RBP eCLIP11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 PTPN5P54829 565 aa11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 OSTNP61366 133 aa11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 ATP2C1P98194 919 aaPredicted RBP11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 NHLH1Q02575 133 aa11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 RAD51AP2Q09MP3 1159 aa11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 TDGQ13569 410 aa11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 PSMD5Q16401 504 aa11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 GLRA4Q5JXX5 417 aa11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 RTP2Q5QGT7 225 aa11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 LIN9Q5TKA1 542 aa11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 ARL6IP4Q66PJ3 421 aaKnown RBP11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 PRSS55Q6UWB4 352 aaPredicted RBP11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 C1orf186Q6ZWK4 172 aa11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 ALYREFQ86V81 257 aaKnown RBP11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 ASIC4Q96FT7 647 aa11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 CALML4Q96GE6 196 aa11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 UROC1Q96N76 676 aa11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 ACAP3Q96P50 834 aa11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 ACO2Q99798 780 aaKnown RBP11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 TARS2Q9BW92 718 aaKnown RBP11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 WDR6Q9NNW5 1121 aaKnown RBP11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 SLC38A7Q9NVC3 462 aa11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 ZDHHC7Q9NXF8 308 aa11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 IGSF9Q9P2J2 1179 aa11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 FBXL21Q9UKT6 434 aa11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 MYO10Q9HD67 2058 aa11.07□□□□□ -0.64
UBE2D3-227ENST00000508818 SLC16A4O15374 487 aa11.06□□□□□ -0.64
UBE2D3-227ENST00000508818 EDN1P05305 212 aa11.06□□□□□ -0.64
UBE2D3-227ENST00000508818 PLA2G4BP0C869 781 aa11.06□□□□□ -0.64
UBE2D3-227ENST00000508818 MCF2P10911 925 aa11.06□□□□□ -0.64
UBE2D3-227ENST00000508818 HARSP12081 509 aaKnown RBP11.06□□□□□ -0.64
UBE2D3-227ENST00000508818 GUCY2CP25092 1073 aa11.06□□□□□ -0.64
UBE2D3-227ENST00000508818 GRM5P41594 1212 aa11.06□□□□□ -0.64
UBE2D3-227ENST00000508818 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.06□□□□□ -0.64
UBE2D3-227ENST00000508818 PIK3R5Q8WYR1 880 aa11.06□□□□□ -0.64
UBE2D3-227ENST00000508818 DDX27Q96GQ7 796 aaKnown RBP11.06□□□□□ -0.64
UBE2D3-227ENST00000508818 AK8Q96MA6 479 aa11.06□□□□□ -0.64
UBE2D3-227ENST00000508818 MMTAG2Q9BU76 263 aaKnown RBP11.06□□□□□ -0.64
UBE2D3-227ENST00000508818 RHOBTB2Q9BYZ6 727 aa11.06□□□□□ -0.64
UBE2D3-227ENST00000508818 PRKD2Q9BZL6 878 aa11.06□□□□□ -0.64
UBE2D3-227ENST00000508818 IRF2BPLQ9H1B7 796 aa11.06□□□□□ -0.64
UBE2D3-227ENST00000508818 CXCL16Q9H2A7 254 aa11.06□□□□□ -0.64
UBE2D3-227ENST00000508818 KCNK12Q9HB15 430 aa11.06□□□□□ -0.64
UBE2D3-227ENST00000508818 KCND2Q9NZV8 630 aa11.06□□□□□ -0.64
UBE2D3-227ENST00000508818 ZDBF2Q9HCK1 2354 aa11.06□□□□□ -0.64
UBE2D3-227ENST00000508818 CLUHO75153 1309 aa11.06□□□□□ -0.64
UBE2D3-227ENST00000508818 PIEZO1Q92508 2521 aa11.05□□□□□ -0.64
UBE2D3-227ENST00000508818 SMIM28A0A1B0GU29 152 aa11.05□□□□□ -0.64
UBE2D3-227ENST00000508818 H0YCG3 227 aa11.05□□□□□ -0.64
UBE2D3-227ENST00000508818 STK25O00506 426 aa11.05□□□□□ -0.64
UBE2D3-227ENST00000508818 XYLBO75191 536 aa11.05□□□□□ -0.64
UBE2D3-227ENST00000508818 ZMYND10O75800 440 aa11.05□□□□□ -0.64
UBE2D3-227ENST00000508818 BMP15O95972 392 aa11.05□□□□□ -0.64
UBE2D3-227ENST00000508818 KRT18P05783 430 aaKnown RBP11.05□□□□□ -0.64
UBE2D3-227ENST00000508818 PLS3P13797 630 aa11.05□□□□□ -0.64
UBE2D3-227ENST00000508818 RFX1P22670 979 aa11.05□□□□□ -0.64
UBE2D3-227ENST00000508818 CLCNKBP51801 687 aa11.05□□□□□ -0.64
UBE2D3-227ENST00000508818 DHX8Q14562 1220 aaKnown RBP11.05□□□□□ -0.64
UBE2D3-227ENST00000508818 PPM1LQ5SGD2 360 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms