RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 SLC38A7Q9NVC3 462 aa18.52■□□□□ 0.56
CLDND1-219ENST00000508659 PANK4Q9NVE7 773 aa18.52■□□□□ 0.56
CLDND1-219ENST00000508659 KBTBD4Q9NVX7 518 aa18.52■□□□□ 0.56
CLDND1-219ENST00000508659 TBC1D7Q9P0N9 293 aa18.52■□□□□ 0.56
CLDND1-219ENST00000508659 CACNG4Q9UBN1 327 aa18.52■□□□□ 0.56
CLDND1-219ENST00000508659 ADAM28Q9UKQ2 775 aa18.52■□□□□ 0.56
CLDND1-219ENST00000508659 KCNH3Q9ULD8 1083 aa18.52■□□□□ 0.56
CLDND1-219ENST00000508659 BARX2Q9UMQ3 279 aaPredicted RBP18.52■□□□□ 0.56
CLDND1-219ENST00000508659 SF3B1O75533 1304 aaKnown RBP eCLIP18.51■□□□□ 0.55
CLDND1-219ENST00000508659 KIF4AO95239 1232 aa18.51■□□□□ 0.55
CLDND1-219ENST00000508659 CXCL14O95715 111 aa18.51■□□□□ 0.55
CLDND1-219ENST00000508659 LTBRP36941 435 aa18.51■□□□□ 0.55
CLDND1-219ENST00000508659 ASIC1P78348 528 aa18.51■□□□□ 0.55
CLDND1-219ENST00000508659 DLX2Q07687 328 aaPredicted RBP18.51■□□□□ 0.55
CLDND1-219ENST00000508659 ALCAMQ13740 583 aa18.51■□□□□ 0.55
CLDND1-219ENST00000508659 CLUL1Q15846 466 aa18.51■□□□□ 0.55
CLDND1-219ENST00000508659 KYAT1Q16773 422 aa18.51■□□□□ 0.55
CLDND1-219ENST00000508659 PUS10Q3MIT2 529 aaKnown RBP18.51■□□□□ 0.55
CLDND1-219ENST00000508659 PTCRAQ6ISU1 281 aaPredicted RBP18.51■□□□□ 0.55
CLDND1-219ENST00000508659 LLGL2Q6P1M3 1020 aa18.51■□□□□ 0.55
CLDND1-219ENST00000508659 FUT10Q6P4F1 479 aa18.51■□□□□ 0.55
CLDND1-219ENST00000508659 ZNF720Q7Z2F6 126 aa18.51■□□□□ 0.55
CLDND1-219ENST00000508659 CEP57L1Q8IYX8 460 aa18.51■□□□□ 0.55
CLDND1-219ENST00000508659 PPP1R10Q96QC0 940 aaKnown RBP18.51■□□□□ 0.55
CLDND1-219ENST00000508659 UHRF1Q96T88 793 aaPredicted RBP18.51■□□□□ 0.55
CLDND1-219ENST00000508659 PAAF1Q9BRP4 392 aa18.51■□□□□ 0.55
CLDND1-219ENST00000508659 MSTO1Q9BUK6 570 aa18.51■□□□□ 0.55
CLDND1-219ENST00000508659 CXCL16Q9H2A7 254 aa18.51■□□□□ 0.55
CLDND1-219ENST00000508659 MRPL17Q9NRX2 175 aaKnown RBP18.51■□□□□ 0.55
CLDND1-219ENST00000508659 CNTN3Q9P232 1028 aa18.51■□□□□ 0.55
CLDND1-219ENST00000508659 EXOC7Q9UPT5 735 aa18.51■□□□□ 0.55
CLDND1-219ENST00000508659 FAM50BQ9Y247 325 aa18.51■□□□□ 0.55
CLDND1-219ENST00000508659 IRAK3Q9Y616 596 aa18.51■□□□□ 0.55
CLDND1-219ENST00000508659 DLL1O00548 723 aa18.5■□□□□ 0.55
CLDND1-219ENST00000508659 TADA2AO75478 443 aa18.5■□□□□ 0.55
CLDND1-219ENST00000508659 CXCL8P10145 99 aa18.5■□□□□ 0.55
CLDND1-219ENST00000508659 BMP1P13497 986 aa18.5■□□□□ 0.55
CLDND1-219ENST00000508659 GLUD2P49448 558 aa18.5■□□□□ 0.55
CLDND1-219ENST00000508659 COASYQ13057 564 aa18.5■□□□□ 0.55
CLDND1-219ENST00000508659 NAB2Q15742 525 aa18.5■□□□□ 0.55
CLDND1-219ENST00000508659 SEZ6Q53EL9 994 aa18.5■□□□□ 0.55
CLDND1-219ENST00000508659 KIAA1841Q6NSI8 718 aa18.5■□□□□ 0.55
CLDND1-219ENST00000508659 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.5■□□□□ 0.55
CLDND1-219ENST00000508659 HASPINQ8TF76 798 aa18.5■□□□□ 0.55
CLDND1-219ENST00000508659 RABGGTAQ92696 567 aa18.5■□□□□ 0.55
CLDND1-219ENST00000508659 UROC1Q96N76 676 aa18.5■□□□□ 0.55
CLDND1-219ENST00000508659 EMILIN2Q9BXX0 1053 aa18.5■□□□□ 0.55
CLDND1-219ENST00000508659 CD207Q9UJ71 328 aa18.5■□□□□ 0.55
CLDND1-219ENST00000508659 SSX2IPQ9Y2D8 614 aa18.5■□□□□ 0.55
CLDND1-219ENST00000508659 TDRD15B5MCY1 1934 aaKnown RBP18.5■□□□□ 0.55
CLDND1-219ENST00000508659 SMIM28A0A1B0GU29 152 aa18.49■□□□□ 0.55
CLDND1-219ENST00000508659 C2CD2LO14523 706 aa18.49■□□□□ 0.55
CLDND1-219ENST00000508659 OGTO15294 1046 aa18.49■□□□□ 0.55
CLDND1-219ENST00000508659 PPP1R37O75864 691 aa18.49■□□□□ 0.55
CLDND1-219ENST00000508659 CLTAP09496 248 aa18.49■□□□□ 0.55
CLDND1-219ENST00000508659 PFKFB1P16118 471 aa18.49■□□□□ 0.55
CLDND1-219ENST00000508659 RBM10P98175 930 aaKnown RBP18.49■□□□□ 0.55
CLDND1-219ENST00000508659 PPP2R3AQ06190 1150 aa18.49■□□□□ 0.55
CLDND1-219ENST00000508659 XKR4Q5GH76 650 aa18.49■□□□□ 0.55
CLDND1-219ENST00000508659 L1TD1Q5T7N2 865 aaKnown RBP18.49■□□□□ 0.55
CLDND1-219ENST00000508659 ADALQ6DHV7 355 aa18.49■□□□□ 0.55
CLDND1-219ENST00000508659 SLC39A4Q6P5W5 647 aa18.49■□□□□ 0.55
CLDND1-219ENST00000508659 STXBP4Q6ZWJ1 553 aa18.49■□□□□ 0.55
CLDND1-219ENST00000508659 RNF168Q8IYW5 571 aaPredicted RBP18.49■□□□□ 0.55
CLDND1-219ENST00000508659 VN1R2Q8NFZ6 395 aa18.49■□□□□ 0.55
CLDND1-219ENST00000508659 HAPLN2Q9GZV7 340 aa18.49■□□□□ 0.55
CLDND1-219ENST00000508659 PCDHB13Q9Y5F0 798 aa18.49■□□□□ 0.55
CLDND1-219ENST00000508659 HCFC2Q9Y5Z7 792 aa18.49■□□□□ 0.55
CLDND1-219ENST00000508659 A0A0B4J269 797 aa18.48■□□□□ 0.55
CLDND1-219ENST00000508659 CLASP2O75122 1294 aaKnown RBP18.48■□□□□ 0.55
CLDND1-219ENST00000508659 MYBP10242 640 aa18.48■□□□□ 0.55
CLDND1-219ENST00000508659 KCNE1P15382 129 aa18.48■□□□□ 0.55
CLDND1-219ENST00000508659 CMA1P23946 247 aa18.48■□□□□ 0.55
CLDND1-219ENST00000508659 SMAD4Q13485 552 aaKnown RBP18.48■□□□□ 0.55
CLDND1-219ENST00000508659 SLFN12LQ6IEE8 588 aa18.48■□□□□ 0.55
CLDND1-219ENST00000508659 ALKAL1Q6UXT8 129 aa18.48■□□□□ 0.55
CLDND1-219ENST00000508659 CASP10Q92851 521 aa18.48■□□□□ 0.55
CLDND1-219ENST00000508659 ZMAT2Q96NC0 199 aaKnown RBP18.48■□□□□ 0.55
CLDND1-219ENST00000508659 ACCSQ96QU6 501 aa18.48■□□□□ 0.55
CLDND1-219ENST00000508659 GOLGA2P5Q9HBQ8 144 aa18.48■□□□□ 0.55
CLDND1-219ENST00000508659 CLEC1BQ9P126 229 aa18.48■□□□□ 0.55
CLDND1-219ENST00000508659 MYO7AQ13402 2215 aa18.47■□□□□ 0.55
CLDND1-219ENST00000508659 A0A0C4DFX4 3053 aa18.47■□□□□ 0.55
CLDND1-219ENST00000508659 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.47■□□□□ 0.55
CLDND1-219ENST00000508659 A0A1B0GVL5 298 aa18.47■□□□□ 0.55
CLDND1-219ENST00000508659 TISP43B9A030 160 aa18.47■□□□□ 0.55
CLDND1-219ENST00000508659 TMEM189-UBE2V1I3L0A0 370 aa18.47■□□□□ 0.55
CLDND1-219ENST00000508659 B3GAT3O94766 335 aa18.47■□□□□ 0.55
CLDND1-219ENST00000508659 IL9P15248 144 aa18.47■□□□□ 0.55
CLDND1-219ENST00000508659 TNFSF9P41273 254 aa18.47■□□□□ 0.55
CLDND1-219ENST00000508659 AFMP43652 599 aa18.47■□□□□ 0.55
CLDND1-219ENST00000508659 CLCNKBP51801 687 aa18.47■□□□□ 0.55
CLDND1-219ENST00000508659 CASP5P51878 434 aa18.47■□□□□ 0.55
CLDND1-219ENST00000508659 ELAVL2Q12926 359 aaKnown RBP18.47■□□□□ 0.55
CLDND1-219ENST00000508659 SLC10A6Q3KNW5 377 aa18.47■□□□□ 0.55
CLDND1-219ENST00000508659 USP41Q3LFD5 358 aa18.47■□□□□ 0.55
CLDND1-219ENST00000508659 TPRNQ4KMQ1 711 aa18.47■□□□□ 0.55
CLDND1-219ENST00000508659 CNNM4Q6P4Q7 775 aa18.47■□□□□ 0.55
CLDND1-219ENST00000508659 PPFIBP1Q86W92 1011 aa18.47■□□□□ 0.55
CLDND1-219ENST00000508659 SYCP3Q8IZU3 236 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms