RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 BCO2Q9BYV7 579 aa10.21□□□□□ -0.77
UBE2D3-223ENST00000508249 PRKD2Q9BZL6 878 aa10.21□□□□□ -0.77
UBE2D3-223ENST00000508249 CHST12Q9NRB3 414 aa10.21□□□□□ -0.77
UBE2D3-223ENST00000508249 CHST7Q9NS84 486 aa10.21□□□□□ -0.77
UBE2D3-223ENST00000508249 ANKEF1Q9NU02 776 aa10.21□□□□□ -0.77
UBE2D3-223ENST00000508249 ZDHHC7Q9NXF8 308 aa10.21□□□□□ -0.77
UBE2D3-223ENST00000508249 DAXXQ9UER7 740 aaPredicted RBP10.21□□□□□ -0.77
UBE2D3-223ENST00000508249 SPAG17Q6Q759 2223 aa10.21□□□□□ -0.78
UBE2D3-223ENST00000508249 A0A087WZ62 844 aa10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 CARNS1A5YM72 827 aa10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 TMEM150BA6NC51 233 aa10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 FAM170BA6NMN3 283 aa10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 DDX11L8A8MPP1 907 aa10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 TM4SF5O14894 197 aa10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 TBC1D4O60343 1298 aa10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 MAFO75444 373 aaPredicted RBP10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 URODP06132 367 aa10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 ADH1AP07327 375 aa10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 HSP90AA1P07900 732 aaKnown RBP10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 YWHABP31946 246 aaKnown RBP10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 RPS9P46781 194 aaKnown RBP10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 DSC1Q08554 894 aa10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 MTAPQ13126 283 aa10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 UBXN2BQ14CS0 331 aa10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 ZNF174Q15697 407 aa10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 SLC44A4Q53GD3 710 aa10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 TWF2Q6IBS0 349 aaKnown RBP10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 MRPL10Q7Z7H8 261 aaKnown RBP10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 ZNF410Q86VK4 478 aa10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 COLGALT2Q8IYK4 626 aa10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 HDAC7Q8WUI4 952 aa10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 TCP11Q8WWU5 503 aa10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 NLRP7Q8WX94 980 aa10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 ATRIPQ8WXE1 791 aa10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 GJA10Q969M2 543 aa10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 EIF2AK1Q9BQI3 630 aaKnown RBP10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 FDXACB1Q9BRP7 624 aaPredicted RBP10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 POLR3CQ9BUI4 534 aaPredicted RBP10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 INO80BQ9C086 356 aaPredicted RBP10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 TMEM60Q9H2L4 133 aa10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 ZSCAN16Q9H4T2 348 aaPredicted RBP10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 AGPAT5Q9NUQ2 364 aa10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 PIN4Q9Y237 131 aaKnown RBP10.2□□□□□ -0.78
UBE2D3-223ENST00000508249 NRG2O14511 850 aaPredicted RBP10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 ASAP2O43150 1006 aa10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 DGAT1O75907 488 aa10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 SLITRK3O94933 977 aa10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 RPA1P27694 616 aa10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 MAGEA9P43362 315 aa10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 GLUD2P49448 558 aa10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 ATP2C1P98194 919 aaPredicted RBP10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 RNASELQ05823 741 aaKnown RBP10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 PTGDRQ13258 359 aa10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 ACAP1Q15027 740 aa10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 PCBP1Q15365 356 aaKnown RBP eCLIP10.19□□□□□ -0.789e-7■□□□□ 10.8
UBE2D3-223ENST00000508249 MTERF2Q49AM1 385 aa10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 N4BP2L1Q5TBK1 243 aaPredicted RBP10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 RSPO2Q6UXX9 243 aaPredicted RBP10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 DTHD1Q6ZMT9 781 aa10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 PRR23CQ6ZRP0 262 aa10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 ANO5Q75V66 913 aa10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 FGF13Q92913 245 aa10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 DYDC2Q96IM9 177 aa10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 SHDQ96IW2 340 aa10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 CHAMP1Q96JM3 812 aa10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 CEP170P1Q96L14 293 aa10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 NACC1Q96RE7 527 aa10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 TMEM121BQ9BXQ6 578 aaPredicted RBP10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 PLEKHA4Q9H4M7 779 aa10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 IFT122Q9HBG6 1241 aa10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 SEMA4GQ9NTN9 838 aa10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 STK39Q9UEW8 545 aa10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 ANGPTL2Q9UKU9 493 aa10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 CDH7Q9ULB5 785 aa10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 PRG3Q9Y2Y8 225 aaPredicted RBP10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 PCDHB2Q9Y5E7 798 aa10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 MORC2Q9Y6X9 1032 aaPredicted RBP10.19□□□□□ -0.78
UBE2D3-223ENST00000508249 CELSR3Q9NYQ7 3312 aa10.18□□□□□ -0.78
UBE2D3-223ENST00000508249 VPS37CA5D8V6 355 aaPredicted RBP10.18□□□□□ -0.78
UBE2D3-223ENST00000508249 WNT7AO00755 349 aa10.18□□□□□ -0.78
UBE2D3-223ENST00000508249 LRP3O75074 770 aa10.18□□□□□ -0.78
UBE2D3-223ENST00000508249 ZMYND10O75800 440 aa10.18□□□□□ -0.78
UBE2D3-223ENST00000508249 C1RP00736 705 aa10.18□□□□□ -0.78
UBE2D3-223ENST00000508249 POMCP01189 267 aa10.18□□□□□ -0.78
UBE2D3-223ENST00000508249 RPL17P18621 184 aaKnown RBP10.18□□□□□ -0.78
UBE2D3-223ENST00000508249 SYT1P21579 422 aa10.18□□□□□ -0.78
UBE2D3-223ENST00000508249 FSHRP23945 695 aa10.18□□□□□ -0.78
UBE2D3-223ENST00000508249 HOXA11P31270 313 aaPredicted RBP10.18□□□□□ -0.78
UBE2D3-223ENST00000508249 TOB1P50616 345 aaPredicted RBP10.18□□□□□ -0.78
UBE2D3-223ENST00000508249 RAB27AP51159 221 aa10.18□□□□□ -0.78
UBE2D3-223ENST00000508249 DMWDQ09019 674 aa10.18□□□□□ -0.78
UBE2D3-223ENST00000508249 KRT79Q5XKE5 535 aa10.18□□□□□ -0.78
UBE2D3-223ENST00000508249 LAIR1Q6GTX8 287 aa10.18□□□□□ -0.78
UBE2D3-223ENST00000508249 TPRG1Q6ZUI0 275 aa10.18□□□□□ -0.78
UBE2D3-223ENST00000508249 GRASPQ7Z6J2 395 aaPredicted RBP10.18□□□□□ -0.78
UBE2D3-223ENST00000508249 PALB2Q86YC2 1186 aa10.18□□□□□ -0.78
UBE2D3-223ENST00000508249 KSR1Q8IVT5 923 aa10.18□□□□□ -0.78
UBE2D3-223ENST00000508249 TPH2Q8IWU9 490 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms