RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, human

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42SE2-210	ENST00000506929	SLC2A4RG	Q9NR83	387 aa		4.61	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	FBXO34	Q9NWN3	711 aa		4.61	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	SORCS3	Q9UPU3	1222 aa		4.61	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	HDAC5	Q9UQL6	1122 aa		4.61	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	MYBBP1A	Q9BQG0	1328 aa	Known RBP	4.61	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	TCRBV7S2A1N4T	A0A589	114 aa		4.6	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	FZD7	O75084	574 aa		4.6	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	RPS6KA4	O75676	772 aa		4.6	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	SLC6A4	P31645	630 aa		4.6	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	WAS	P42768	502 aa		4.6	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	GDF5	P43026	501 aa		4.6	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	FLT3LG	P49771	235 aa		4.6	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	RAB27A	P51159	221 aa		4.6	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	CHN2	P52757	468 aa		4.6	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	RNASE9	P60153	205 aa	Known RBP	4.6	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	DSC2	Q02487	901 aa		4.6	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	NHLH2	Q02577	135 aa		4.6	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	FOXE3	Q13461	319 aa		4.6	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	DOK3	Q7L591	496 aa		4.6	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	CPA6	Q8N4T0	437 aa		4.6	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	CACTIN	Q8WUQ7	758 aa	Known RBP	4.6	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	TFAP2C	Q92754	450 aa		4.6	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	CHMP4C	Q96CF2	233 aa		4.6	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	C7orf25	Q9BPX7	421 aa		4.6	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	RHOBTB2	Q9BYZ6	727 aa		4.6	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	LANCL2	Q9NS86	450 aa		4.6	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	4.6	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	SRRD	Q9UH36	339 aa		4.6	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	MRFAP1	Q9Y605	127 aa		4.6	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	PRR5-ARHGAP8	B1AHC4	643 aa		4.59	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	NPIPB8	E9PQR5	432 aa		4.59	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	CYP27B1	O15528	508 aa		4.59	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	AKAP10	O43572	662 aa		4.59	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	AKAP8	O43823	692 aa	Known RBP	4.59	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	GPR32	O75388	356 aa		4.59	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	IPO13	O94829	963 aa	Known RBP	4.59	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	SNUPN	O95149	360 aa	Known RBP	4.59	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	FSHB	P01225	129 aa		4.59	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	HSP90B1	P14625	803 aa	Known RBP	4.59	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	DDC	P20711	480 aa		4.59	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	RECQL	P46063	649 aa	Predicted RBP	4.59	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	KRT85	P78386	507 aa		4.59	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	MIIP	Q5JXC2	388 aa		4.59	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	ZNF529	Q6P280	563 aa		4.59	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	USP51	Q70EK9	711 aa		4.59	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	SLC16A11	Q8NCK7	471 aa		4.59	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	IFI44	Q8TCB0	444 aa		4.59	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	CPT1C	Q8TCG5	803 aa		4.59	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	PAWR	Q96IZ0	340 aa	Known RBP	4.59	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	TMX3	Q96JJ7	454 aa		4.59	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	NDC1	Q9BTX1	674 aa		4.59	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	POGK	Q9P215	609 aa		4.59	□□□□□ -1.67
CDC42SE2-210	ENST00000506929	DRGX	A6NNA5	263 aa		4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	PRPF3	O43395	683 aa	Known RBP	4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	ENDOD1	O94919	500 aa		4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	ABLIM3	O94929	683 aa		4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	SCAF4	O95104	1147 aa	Known RBP	4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	IL33	O95760	270 aa		4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	PF4V1	P10720	104 aa		4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	NCL	P19338	710 aa	Known RBP	4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	PDC	P20941	246 aa		4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	ADK	P55263	362 aa	Known RBP	4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	CLRN1	P58418	232 aa		4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	SP140	Q13342	867 aa		4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	ZNF267	Q14586	743 aa	Predicted RBP	4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	FLYWCH1	Q4VC44	716 aa		4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	PDCD4	Q53EL6	469 aa	Known RBP	4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	RABL3	Q5HYI8	236 aa		4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	FAM102A	Q5T9C2	384 aa	Predicted RBP	4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	NAIF1	Q69YI7	327 aa	Predicted RBP	4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	EFCAB12	Q6NXP0	572 aa		4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	MED25	Q71SY5	747 aa		4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	PDZD4	Q76G19	769 aa	Predicted RBP	4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	TPH2	Q8IWU9	490 aa		4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	HSPBAP1	Q96EW2	488 aa		4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	CLPTM1L	Q96KA5	538 aa		4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	MRGPRX4	Q96LA9	322 aa		4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	VRK1	Q99986	396 aa	Predicted RBP	4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	ZNF341	Q9BYN7	854 aa		4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	GTPBP4	Q9BZE4	634 aa	Known RBP	4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	SCAND2P	Q9GZW5	306 aa	Predicted RBP	4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	CSRNP2	Q9H175	543 aa		4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	TYW1	Q9NV66	732 aa	Known RBP	4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	GPRC5B	Q9NZH0	403 aa		4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	VSX1	Q9NZR4	365 aa	Predicted RBP	4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	SLC45A2	Q9UMX9	530 aa		4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	G3BP2	Q9UN86	482 aa	Known RBP	4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	MAP3K2	Q9Y2U5	619 aa		4.58	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	AATK	Q6ZMQ8	1374 aa		4.57	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	FAM171A2	A8MVW0	826 aa		4.57	□□□□□ -1.68
CDC42SE2-210	ENST00000506929		B5MCH6	92 aa		4.57	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	CYR61	O00622	381 aa		4.57	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	NARS	O43776	548 aa	Known RBP	4.57	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	LPXN	O60711	386 aa		4.57	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	ITGB1	P05556	798 aa		4.57	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	MYB	P10242	640 aa		4.57	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	ATP5J	P18859	108 aa		4.57	□□□□□ -1.68
CDC42SE2-210	ENST00000506929	ACVRL1	P37023	503 aa		4.57	□□□□□ -1.68

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