RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 PDXKO00764 312 aa9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 PSMA7O14818 248 aa9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 EXOC3O60645 756 aa9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 BAIAP3O94812 1187 aa9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 NR2F2P24468 414 aa9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 PBX3P40426 434 aa9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 GRM5P41594 1212 aa9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 FOXK1P85037 733 aa9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 PAK1Q13153 545 aa9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 ADAM9Q13443 819 aa9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 PCBP1Q15365 356 aaKnown RBP eCLIP9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 DCAF4L1Q3SXM0 396 aa9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 SLFN12LQ6IEE8 588 aa9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 GPR153Q6NV75 609 aa9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 TTI2Q6NXR4 508 aa9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 LRRC55Q6ZSA7 311 aa9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 ZNF280BQ86YH2 543 aa9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 NPAS4Q8IUM7 802 aa9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 CREBRFQ8IUR6 639 aa9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 HERC6Q8IVU3 1022 aa9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 MLKLQ8NB16 471 aa9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 GSTCDQ8NEC7 633 aa9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 C18orf25Q96B23 403 aaPredicted RBP9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 ELMO3Q96BJ8 720 aa9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 CCDC127Q96BQ5 260 aa9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 CCDC51Q96ER9 411 aa9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 DHTKD1Q96HY7 919 aaPredicted RBP9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 ACAP3Q96P50 834 aa9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 CASD1Q96PB1 797 aa9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 CCDC94Q9BW85 323 aaPredicted RBP9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 PDE11AQ9HCR9 933 aa9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 TOPORSQ9NS56 1045 aaPredicted RBP9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 DMAC2Q9NW81 257 aa9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 TMEM161AQ9NX61 479 aa9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 CPSF3Q9UKF6 684 aaKnown RBP9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 UBE4BO95155 1302 aa9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 CDH23Q9H251 3354 aa9.62□□□□□ -0.87
SCAMP1-202ENST00000506858 PTPRSQ13332 1948 aa9.61□□□□□ -0.87
SCAMP1-202ENST00000506858 F8W810 466 aa9.61□□□□□ -0.87
SCAMP1-202ENST00000506858 PTGESO14684 152 aa9.61□□□□□ -0.87
SCAMP1-202ENST00000506858 CALUO43852 315 aaPredicted RBP9.61□□□□□ -0.87
SCAMP1-202ENST00000506858 EXTL3O43909 919 aa9.61□□□□□ -0.87
SCAMP1-202ENST00000506858 DGKIO75912 1065 aa9.61□□□□□ -0.87
SCAMP1-202ENST00000506858 AKAP3O75969 853 aa9.61□□□□□ -0.87
SCAMP1-202ENST00000506858 GJB5O95377 273 aa9.61□□□□□ -0.87
SCAMP1-202ENST00000506858 GARTP22102 1010 aa9.61□□□□□ -0.87
SCAMP1-202ENST00000506858 DLG4P78352 724 aa9.61□□□□□ -0.87
SCAMP1-202ENST00000506858 STIM1Q13586 685 aa9.61□□□□□ -0.87
SCAMP1-202ENST00000506858 STX1AQ16623 288 aa9.61□□□□□ -0.87
SCAMP1-202ENST00000506858 TDHQ8IZJ6 230 aa9.61□□□□□ -0.87
SCAMP1-202ENST00000506858 GPD1LQ8N335 351 aa9.61□□□□□ -0.87
SCAMP1-202ENST00000506858 XXYLT1Q8NBI6 393 aa9.61□□□□□ -0.87
SCAMP1-202ENST00000506858 TRAIPQ9BWF2 469 aa9.61□□□□□ -0.87
SCAMP1-202ENST00000506858 SRRTQ9BXP5 876 aaKnown RBP9.61□□□□□ -0.87
SCAMP1-202ENST00000506858 RPF1Q9H9Y2 349 aaKnown RBP9.61□□□□□ -0.87
SCAMP1-202ENST00000506858 CERS4Q9HA82 394 aa9.61□□□□□ -0.87
SCAMP1-202ENST00000506858 RSAD1Q9HA92 442 aa9.61□□□□□ -0.87
SCAMP1-202ENST00000506858 GOLGA2P5Q9HBQ8 144 aa9.61□□□□□ -0.87
SCAMP1-202ENST00000506858 ANO10Q9NW15 660 aa9.61□□□□□ -0.87
SCAMP1-202ENST00000506858 TRAF3IP3Q9Y228 551 aa9.61□□□□□ -0.87
SCAMP1-202ENST00000506858 YBX2Q9Y2T7 364 aaKnown RBP9.61□□□□□ -0.87
SCAMP1-202ENST00000506858 NT5C1B-RDH14C9J2C7 533 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 TLL1O43897 1013 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 DDHD2O94830 711 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 EOMESO95936 686 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 NFICP08651 508 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 CLTAP09496 248 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 BMP8BP34820 402 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 RAB27AP51159 221 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 SOX4Q06945 474 aaPredicted RBP9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 PTPRJQ12913 1337 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 MYO7AQ13402 2215 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 TRIP11Q15643 1979 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 SNRNP35Q16560 246 aaKnown RBP9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 COBLL1Q53SF7 1204 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 NOMO2Q5JPE7 1267 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 JADE1Q6IE81 842 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 EFCAB13Q8IY85 973 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 PGBD4Q96DM1 585 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 SNX27Q96L92 541 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 YME1L1Q96TA2 773 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 TSG101Q99816 390 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 PAAF1Q9BRP4 392 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 MMRN2Q9H8L6 949 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 SAMSN1Q9NSI8 373 aaKnown RBP9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 RBAKQ9NYW8 714 aaPredicted RBP9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 DNAJB4Q9UDY4 337 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 MTUS1Q9ULD2 1270 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 SMIM28A0A1B0GU29 152 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 TTC26A0AVF1 554 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 CASTOR2A6NHX0 329 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 ZNF233A6NK53 670 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 EFCAB14O75071 495 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 CSPG5O95196 566 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 KIF20AO95235 890 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 TRIM49P0CI25 452 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 TRIM49CP0CI26 452 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 CCDC192P0DO97 292 aa9.6□□□□□ -0.87
SCAMP1-202ENST00000506858 DLATP10515 647 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms