RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 GAS2L3Q86XJ1 694 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 DHX40Q8IX18 779 aaKnown RBP5.39□□□□□ -1.55
LMNB1-208ENST00000504788 EFCAB13Q8IY85 973 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 RNF168Q8IYW5 571 aaPredicted RBP5.39□□□□□ -1.55
LMNB1-208ENST00000504788 PHOSPHO2Q8TCD6 241 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 SNX27Q96L92 541 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 SCLT1Q96NL6 688 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 BPIFA3Q9BQP9 254 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 CWH43Q9H720 699 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 C1orf112Q9NSG2 853 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 SNTG2Q9NY99 539 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 CGNQ9P2M7 1197 aaKnown RBP5.39□□□□□ -1.55
LMNB1-208ENST00000504788 PRKAG2Q9UGJ0 569 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 RWDD2AQ9UIY3 292 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 HOOK1Q9UJC3 728 aaKnown RBP5.39□□□□□ -1.55
LMNB1-208ENST00000504788 MUC3AQ02505 3323 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 SMIM28A0A1B0GU29 152 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 ARL5CA6NH57 179 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 KIAA0391O15091 583 aaKnown RBP5.39□□□□□ -1.55
LMNB1-208ENST00000504788 EXTL3O43909 919 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 EFCAB14O75071 495 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 LRRN2O75325 713 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 DDHD2O94830 711 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 CXCL8P10145 99 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 NR2F2P24468 414 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 PBX2P40425 430 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 LIG4P49917 911 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 DLG4P78352 724 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 STRN3Q13033 797 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 PAK1Q13153 545 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 SNRNP35Q16560 246 aaKnown RBP5.39□□□□□ -1.55
LMNB1-208ENST00000504788 DCAF4L1Q3SXM0 396 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 SLFN12LQ6IEE8 588 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 ZBTB33Q86T24 672 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 TMEM173Q86WV6 379 aaPredicted RBP5.39□□□□□ -1.55
LMNB1-208ENST00000504788 ZNF280BQ86YH2 543 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 NPAS4Q8IUM7 802 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 HERC6Q8IVU3 1022 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 BRSK2Q8IWQ3 736 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 THNSL1Q8IYQ7 743 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 TDHQ8IZJ6 230 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 GPD1LQ8N335 351 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 XXYLT1Q8NBI6 393 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 C3orf58Q8NDZ4 430 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 PARD3BQ8TEW8 1205 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 NELFBQ8WX92 580 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 CLP1Q92989 425 aaKnown RBP5.39□□□□□ -1.55
LMNB1-208ENST00000504788 SLC35C1Q96A29 364 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 SAAL1Q96ER3 474 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 CCDC34Q96HJ3 373 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 SLC9A7Q96T83 725 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 GAD1Q99259 594 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 PAAF1Q9BRP4 392 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 MKNK1Q9BUB5 465 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 GTPBP4Q9BZE4 634 aaKnown RBP5.39□□□□□ -1.55
LMNB1-208ENST00000504788 DNAJC25Q9H1X3 360 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 PCIF1Q9H4Z3 704 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 TBC1D13Q9NVG8 400 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 ANKFY1Q9P2R3 1169 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 AGO2Q9UKV8 859 aaKnown RBP5.39□□□□□ -1.55
LMNB1-208ENST00000504788 YBX2Q9Y2T7 364 aaKnown RBP5.39□□□□□ -1.55
LMNB1-208ENST00000504788 GIT1Q9Y2X7 761 aa5.39□□□□□ -1.55
LMNB1-208ENST00000504788 A0A1W2PPC1 479 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 ANO9A1A5B4 782 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 GOLGA8IPA6NC78 632 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 LRRC10BA6NIK2 292 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 GOLGA8JA6NMD2 632 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 LACTBL1A8MY62 500 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 F8W810 466 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 SOX1O00570 391 aaPredicted RBP5.38□□□□□ -1.55
LMNB1-208ENST00000504788 CLTAP09496 248 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 MYOGP15173 224 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 ZSCAN20P17040 1043 aaPredicted RBP5.38□□□□□ -1.55
LMNB1-208ENST00000504788 MLH1P40692 756 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 PPP1R2P41236 205 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 STX17P56962 302 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 FKBP3Q00688 224 aaKnown RBP5.38□□□□□ -1.55
LMNB1-208ENST00000504788 ENPEPQ07075 957 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 CYP24A1Q07973 514 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 PPP3CAQ08209 521 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 CAMK1Q14012 370 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 LRIT3Q3SXY7 679 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 ANO6Q4KMQ2 910 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 MIIPQ5JXC2 388 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 ARMCX5Q6P1M9 558 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 LIMS2Q7Z4I7 341 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 TRIM59Q8IWR1 403 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 COLGALT2Q8IYK4 626 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 OR5B17Q8NGF7 314 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 LMO3Q8TAP4 145 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 ENOX1Q8TC92 643 aaKnown RBP5.38□□□□□ -1.55
LMNB1-208ENST00000504788 BCL7CQ8WUZ0 217 aaPredicted RBP5.38□□□□□ -1.55
LMNB1-208ENST00000504788 POMGNT1Q8WZA1 660 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 MSTO1Q9BUK6 570 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 VN1R3Q9BXE9 311 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 PBX4Q9BYU1 374 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 RSAD1Q9HA92 442 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 PLEKHA5Q9HAU0 1116 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 PDE11AQ9HCR9 933 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 SAMSN1Q9NSI8 373 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms