RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 GJB7Q6PEY0 223 aa11.28□□□□□ -0.6
TPM3-217ENST00000504663 FAM126BQ8IXS8 530 aa11.28□□□□□ -0.6
TPM3-217ENST00000504663 ZNF710Q8N1W2 664 aa11.28□□□□□ -0.6
TPM3-217ENST00000504663 ARRDC4Q8NCT1 418 aa11.28□□□□□ -0.6
TPM3-217ENST00000504663 OR5B17Q8NGF7 314 aa11.28□□□□□ -0.6
TPM3-217ENST00000504663 CCDC127Q96BQ5 260 aa11.28□□□□□ -0.6
TPM3-217ENST00000504663 GLT1D1Q96MS3 346 aa11.28□□□□□ -0.6
TPM3-217ENST00000504663 PANX2Q96RD6 677 aa11.28□□□□□ -0.6
TPM3-217ENST00000504663 CGRRF1Q99675 332 aa11.28□□□□□ -0.6
TPM3-217ENST00000504663 INTS2Q9H0H0 1204 aaKnown RBP11.28□□□□□ -0.6
TPM3-217ENST00000504663 TRPV6Q9H1D0 765 aa11.28□□□□□ -0.6
TPM3-217ENST00000504663 AGO3Q9H9G7 860 aaKnown RBP11.28□□□□□ -0.6
TPM3-217ENST00000504663 TMEM8AQ9HCN3 771 aa11.28□□□□□ -0.6
TPM3-217ENST00000504663 ERVK-5Q9HDB9 667 aa11.28□□□□□ -0.6
TPM3-217ENST00000504663 STARD7Q9NQZ5 370 aa11.28□□□□□ -0.6
TPM3-217ENST00000504663 FAM207AQ9NSI2 230 aaPredicted RBP11.28□□□□□ -0.6
TPM3-217ENST00000504663 GCNT4Q9P109 453 aa11.28□□□□□ -0.6
TPM3-217ENST00000504663 FBXL5Q9UKA1 691 aa11.28□□□□□ -0.6
TPM3-217ENST00000504663 ALPK3Q96L96 1907 aa11.28□□□□□ -0.6
TPM3-217ENST00000504663 SCN5AQ14524 2016 aa11.27□□□□□ -0.61
TPM3-217ENST00000504663 MYCP01106 439 aaPredicted RBP11.27□□□□□ -0.61
TPM3-217ENST00000504663 CD4P01730 458 aa11.27□□□□□ -0.61
TPM3-217ENST00000504663 STAG3L1P0CL83 205 aa11.27□□□□□ -0.61
TPM3-217ENST00000504663 CXCL8P10145 99 aa11.27□□□□□ -0.61
TPM3-217ENST00000504663 GTF2H1P32780 548 aa11.27□□□□□ -0.61
TPM3-217ENST00000504663 GRM5P41594 1212 aa11.27□□□□□ -0.61
TPM3-217ENST00000504663 POU5F1Q01860 360 aaKnown RBP11.27□□□□□ -0.61
TPM3-217ENST00000504663 DSC3Q14574 896 aa11.27□□□□□ -0.61
TPM3-217ENST00000504663 GPNMBQ14956 572 aa11.27□□□□□ -0.61
TPM3-217ENST00000504663 SLC10A6Q3KNW5 377 aa11.27□□□□□ -0.61
TPM3-217ENST00000504663 HGSNATQ68CP4 663 aa11.27□□□□□ -0.61
TPM3-217ENST00000504663 IQCEQ6IPM2 695 aa11.27□□□□□ -0.61
TPM3-217ENST00000504663 PHLDB3Q6NSJ2 640 aa11.27□□□□□ -0.61
TPM3-217ENST00000504663 GBP6Q6ZN66 633 aa11.27□□□□□ -0.61
TPM3-217ENST00000504663 SV2AQ7L0J3 742 aa11.27□□□□□ -0.61
TPM3-217ENST00000504663 CATSPER4Q7RTX7 472 aa11.27□□□□□ -0.61
TPM3-217ENST00000504663 ARHGEF19Q8IW93 802 aa11.27□□□□□ -0.61
TPM3-217ENST00000504663 TAS1R2Q8TE23 839 aa11.27□□□□□ -0.61
TPM3-217ENST00000504663 CPLX3Q8WVH0 158 aa11.27□□□□□ -0.61
TPM3-217ENST00000504663 NUP58Q9BVL2 599 aa11.27□□□□□ -0.61
TPM3-217ENST00000504663 MFRPQ9BY79 579 aa11.27□□□□□ -0.61
TPM3-217ENST00000504663 EDEM3Q9BZQ6 932 aa11.27□□□□□ -0.61
TPM3-217ENST00000504663 RNF208Q9H0X6 261 aa11.27□□□□□ -0.61
TPM3-217ENST00000504663 MMRN2Q9H8L6 949 aa11.27□□□□□ -0.61
TPM3-217ENST00000504663 CEP72Q9P209 647 aa11.27□□□□□ -0.61
TPM3-217ENST00000504663 GINS2Q9Y248 185 aa11.27□□□□□ -0.61
TPM3-217ENST00000504663 MROH7Q68CQ1 1323 aa11.27□□□□□ -0.61
TPM3-217ENST00000504663 LRRC53A6NM62 1247 aa11.26□□□□□ -0.61
TPM3-217ENST00000504663 KBTBD13C9JR72 458 aa11.26□□□□□ -0.61
TPM3-217ENST00000504663 MGEA5O60502 916 aa11.26□□□□□ -0.61
TPM3-217ENST00000504663 N4BP1O75113 896 aaKnown RBP11.26□□□□□ -0.61
TPM3-217ENST00000504663 CAND2O75155 1236 aa11.26□□□□□ -0.61
TPM3-217ENST00000504663 ERLIN2O94905 339 aa11.26□□□□□ -0.61
TPM3-217ENST00000504663 NPTXRO95502 500 aa11.26□□□□□ -0.61
TPM3-217ENST00000504663 UCHL3P15374 230 aa11.26□□□□□ -0.61
TPM3-217ENST00000504663 AXLP30530 894 aa11.26□□□□□ -0.61
TPM3-217ENST00000504663 KRT9P35527 623 aa11.26□□□□□ -0.61
TPM3-217ENST00000504663 POLR2FP61218 127 aaKnown RBP11.26□□□□□ -0.61
TPM3-217ENST00000504663 ZBED6P86452 979 aa11.26□□□□□ -0.61
TPM3-217ENST00000504663 LPIN1Q14693 890 aa11.26□□□□□ -0.61
TPM3-217ENST00000504663 MTF1Q14872 753 aa11.26□□□□□ -0.61
TPM3-217ENST00000504663 DCAF4L1Q3SXM0 396 aa11.26□□□□□ -0.61
TPM3-217ENST00000504663 ZNF618Q5T7W0 954 aa11.26□□□□□ -0.61
TPM3-217ENST00000504663 KRT39Q6A163 491 aa11.26□□□□□ -0.61
TPM3-217ENST00000504663 SLC27A1Q6PCB7 646 aa11.26□□□□□ -0.61
TPM3-217ENST00000504663 RAD9BQ6WBX8 426 aa11.26□□□□□ -0.61
TPM3-217ENST00000504663 ZSCAN30Q86W11 494 aa11.26□□□□□ -0.61
TPM3-217ENST00000504663 CNGA4Q8IV77 575 aa11.26□□□□□ -0.61
TPM3-217ENST00000504663 THNSL1Q8IYQ7 743 aa11.26□□□□□ -0.61
TPM3-217ENST00000504663 C17orf53Q8N3J3 647 aaPredicted RBP11.26□□□□□ -0.61
TPM3-217ENST00000504663 SMG8Q8ND04 991 aaKnown RBP11.26□□□□□ -0.61
TPM3-217ENST00000504663 EHBP1Q8NDI1 1231 aa11.26□□□□□ -0.61
TPM3-217ENST00000504663 KIAA1524Q8TCG1 905 aa11.26□□□□□ -0.61
TPM3-217ENST00000504663 HELQQ8TDG4 1101 aa11.26□□□□□ -0.61
TPM3-217ENST00000504663 DIS3LQ8TF46 1054 aaKnown RBP11.26□□□□□ -0.61
TPM3-217ENST00000504663 U2AF1L4Q8WU68 220 aaKnown RBP11.26□□□□□ -0.61
TPM3-217ENST00000504663 LINC01599Q8WXQ3 324 aa11.26□□□□□ -0.61
TPM3-217ENST00000504663 KAT5Q92993 513 aa11.26□□□□□ -0.61
TPM3-217ENST00000504663 ELMO3Q96BJ8 720 aa11.26□□□□□ -0.61
TPM3-217ENST00000504663 IQCDQ96DY2 449 aa11.26□□□□□ -0.61
TPM3-217ENST00000504663 CCDC51Q96ER9 411 aa11.26□□□□□ -0.61
TPM3-217ENST00000504663 KREMEN1Q96MU8 473 aa11.26□□□□□ -0.61
TPM3-217ENST00000504663 SCLT1Q96NL6 688 aa11.26□□□□□ -0.61
TPM3-217ENST00000504663 NXF3Q9H4D5 531 aaKnown RBP11.26□□□□□ -0.61
TPM3-217ENST00000504663 APOBEC3GQ9HC16 384 aaKnown RBP11.26□□□□□ -0.61
TPM3-217ENST00000504663 COL4A6Q14031 1691 aa11.25□□□□□ -0.61
TPM3-217ENST00000504663 SOWAHDA6NJG2 315 aa11.25□□□□□ -0.61
TPM3-217ENST00000504663 LACTBL1A8MY62 500 aa11.25□□□□□ -0.61
TPM3-217ENST00000504663 SGPL1O95470 568 aa11.25□□□□□ -0.61
TPM3-217ENST00000504663 RPLP2P05387 115 aaKnown RBP11.25□□□□□ -0.61
TPM3-217ENST00000504663 NFICP08651 508 aa11.25□□□□□ -0.61
TPM3-217ENST00000504663 CLTAP09496 248 aa11.25□□□□□ -0.61
TPM3-217ENST00000504663 DLATP10515 647 aaKnown RBP11.25□□□□□ -0.61
TPM3-217ENST00000504663 CKBP12277 381 aa11.25□□□□□ -0.61
TPM3-217ENST00000504663 TRIM21P19474 475 aaKnown RBP11.25□□□□□ -0.61
TPM3-217ENST00000504663 THPOP40225 353 aa11.25□□□□□ -0.61
TPM3-217ENST00000504663 KCNJ6P48051 423 aa11.25□□□□□ -0.61
TPM3-217ENST00000504663 CTCFP49711 727 aaPredicted RBP11.25□□□□□ -0.61
TPM3-217ENST00000504663 OSTNP61366 133 aa11.25□□□□□ -0.61
TPM3-217ENST00000504663 XKR4Q5GH76 650 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms