RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 UBAP2Q5T6F2 1119 aaKnown RBP16.01■□□□□ 0.15
SNF8-203ENST00000504000 CCDC174Q6PII3 467 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 LDHDQ86WU2 507 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 CEP57Q86XR8 500 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 SAMD3Q8N6K7 520 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 FBXL13Q8NEE6 735 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 ATL2Q8NHH9 583 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 GRAMD1AQ96CP6 724 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 SCLT1Q96NL6 688 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 NT5C1BQ96P26 610 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 MTFR1LQ9H019 292 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 TDRD3Q9H7E2 651 aaKnown RBP16.01■□□□□ 0.15
SNF8-203ENST00000504000 EBF2Q9HAK2 575 aa16.01■□□□□ 0.15
SNF8-203ENST00000504000 MAP3K20Q9NYL2 800 aaKnown RBP16.01■□□□□ 0.15
SNF8-203ENST00000504000 SCN9AQ15858 1988 aa16■□□□□ 0.15
SNF8-203ENST00000504000 TISP43B9A030 160 aa16■□□□□ 0.15
SNF8-203ENST00000504000 CLDN3O15551 220 aa16■□□□□ 0.15
SNF8-203ENST00000504000 KIF1CO43896 1103 aaKnown RBP16■□□□□ 0.15
SNF8-203ENST00000504000 ATP2C2O75185 946 aa16■□□□□ 0.15
SNF8-203ENST00000504000 ADRB2P07550 413 aa16■□□□□ 0.15
SNF8-203ENST00000504000 SKIV2L2P42285 1042 aaKnown RBP16■□□□□ 0.15
SNF8-203ENST00000504000 UBXN2AP68543 259 aa16■□□□□ 0.15
SNF8-203ENST00000504000 BNIP1Q12981 228 aa16■□□□□ 0.15
SNF8-203ENST00000504000 MAP4K3Q8IVH8 894 aa16■□□□□ 0.15
SNF8-203ENST00000504000 LARGE2Q8N3Y3 721 aa16■□□□□ 0.15
SNF8-203ENST00000504000 RIBC1Q8N443 379 aaPredicted RBP16■□□□□ 0.15
SNF8-203ENST00000504000 GPATCH11Q8N954 259 aa16■□□□□ 0.15
SNF8-203ENST00000504000 ACER1Q8TDN7 264 aa16■□□□□ 0.15
SNF8-203ENST00000504000 DYDC1Q8WWB3 177 aa16■□□□□ 0.15
SNF8-203ENST00000504000 SEMA4DQ92854 862 aa16■□□□□ 0.15
SNF8-203ENST00000504000 MFSD14AQ96MC6 490 aa16■□□□□ 0.15
SNF8-203ENST00000504000 MOV10L1Q9BXT6 1211 aaKnown RBP16■□□□□ 0.15
SNF8-203ENST00000504000 PRKAG3Q9UGI9 489 aa16■□□□□ 0.15
SNF8-203ENST00000504000 ARL2BPQ9Y2Y0 163 aa16■□□□□ 0.15
SNF8-203ENST00000504000 NEU2Q9Y3R4 380 aa16■□□□□ 0.15
SNF8-203ENST00000504000 UBIAD1Q9Y5Z9 338 aa16■□□□□ 0.15
SNF8-203ENST00000504000 ADGRA3Q8IWK6 1321 aa16■□□□□ 0.15
SNF8-203ENST00000504000 LOC102724159A0A0B4J2E5 919 aa15.99■□□□□ 0.15
SNF8-203ENST00000504000 ATMINO43313 823 aaPredicted RBP15.99■□□□□ 0.15
SNF8-203ENST00000504000 UNGP13051 313 aaPredicted RBP15.99■□□□□ 0.15
SNF8-203ENST00000504000 YWHABP31946 246 aaKnown RBP15.99■□□□□ 0.15
SNF8-203ENST00000504000 PWP2Q15269 919 aaKnown RBP15.99■□□□□ 0.15
SNF8-203ENST00000504000 LONRF1Q17RB8 773 aa15.99■□□□□ 0.15
SNF8-203ENST00000504000 CHADLQ6NUI6 762 aa15.99■□□□□ 0.15
SNF8-203ENST00000504000 TLDC1Q6P9B6 456 aa15.99■□□□□ 0.15
SNF8-203ENST00000504000 DHX38Q92620 1227 aaKnown RBP15.99■□□□□ 0.15
SNF8-203ENST00000504000 NTPCRQ9BSD7 190 aaKnown RBP15.99■□□□□ 0.15
SNF8-203ENST00000504000 C17orf75Q9HAS0 396 aa15.99■□□□□ 0.15
SNF8-203ENST00000504000 VEZTQ9HBM0 779 aa15.99■□□□□ 0.15
SNF8-203ENST00000504000 AGO4Q9HCK5 861 aaKnown RBP15.99■□□□□ 0.15
SNF8-203ENST00000504000 ANKEF1Q9NU02 776 aa15.99■□□□□ 0.15
SNF8-203ENST00000504000 RAB20Q9NX57 234 aa15.99■□□□□ 0.15
SNF8-203ENST00000504000 ZBTB21Q9ULJ3 1066 aa15.99■□□□□ 0.15
SNF8-203ENST00000504000 COL11A2P13942 1736 aaPredicted RBP15.99■□□□□ 0.15
SNF8-203ENST00000504000 CDH16O75309 829 aa15.99■□□□□ 0.15
SNF8-203ENST00000504000 ICAM1P05362 532 aa15.99■□□□□ 0.15
SNF8-203ENST00000504000 NQO1P15559 274 aaKnown RBP15.99■□□□□ 0.15
SNF8-203ENST00000504000 ADSSP30520 456 aa15.99■□□□□ 0.15
SNF8-203ENST00000504000 MAPK4P31152 587 aa15.99■□□□□ 0.15
SNF8-203ENST00000504000 IFNAR2P48551 515 aa15.99■□□□□ 0.15
SNF8-203ENST00000504000 MAP2K1Q02750 393 aaPredicted RBP15.99■□□□□ 0.15
SNF8-203ENST00000504000 PDE4CQ08493 712 aa15.99■□□□□ 0.15
SNF8-203ENST00000504000 CCDC15Q0P6D6 951 aa15.99■□□□□ 0.15
SNF8-203ENST00000504000 ACVR2BQ13705 512 aa15.99■□□□□ 0.15
SNF8-203ENST00000504000 STAT4Q14765 748 aa15.99■□□□□ 0.15
SNF8-203ENST00000504000 PCNX4Q63HM2 1172 aa15.99■□□□□ 0.15
SNF8-203ENST00000504000 PPP1R21Q6ZMI0 780 aa15.99■□□□□ 0.15
SNF8-203ENST00000504000 ARHGEF18Q6ZSZ5 1173 aa15.99■□□□□ 0.15
SNF8-203ENST00000504000 CCDC25Q86WR0 208 aa15.99■□□□□ 0.15
SNF8-203ENST00000504000 MCF2L2Q86YR7 1114 aa15.99■□□□□ 0.15
SNF8-203ENST00000504000 BTBD6Q96KE9 485 aa15.99■□□□□ 0.15
SNF8-203ENST00000504000 IFT74Q96LB3 600 aa15.99■□□□□ 0.15
SNF8-203ENST00000504000 MAGEB18Q96M61 343 aa15.99■□□□□ 0.15
SNF8-203ENST00000504000 DDX23Q9BUQ8 820 aaKnown RBP15.99■□□□□ 0.15
SNF8-203ENST00000504000 DCLK3Q9C098 648 aa15.99■□□□□ 0.15
SNF8-203ENST00000504000 RXFP1Q9HBX9 757 aa15.99■□□□□ 0.15
SNF8-203ENST00000504000 ABCF3Q9NUQ8 709 aa15.99■□□□□ 0.15
SNF8-203ENST00000504000 ASIC3Q9UHC3 531 aa15.99■□□□□ 0.15
SNF8-203ENST00000504000 TBX20Q9UMR3 447 aa15.99■□□□□ 0.15
SNF8-203ENST00000504000 TCP11X1B4DZS4 312 aa15.98■□□□□ 0.15
SNF8-203ENST00000504000 TBC1D12O60347 775 aa15.98■□□□□ 0.15
SNF8-203ENST00000504000 ABHD2P08910 425 aa15.98■□□□□ 0.15
SNF8-203ENST00000504000 DLATP10515 647 aaKnown RBP15.98■□□□□ 0.15
SNF8-203ENST00000504000 CNGA1P29973 690 aa15.98■□□□□ 0.15
SNF8-203ENST00000504000 SLC18A1P54219 525 aa15.98■□□□□ 0.15
SNF8-203ENST00000504000 COPS2P61201 443 aa15.98■□□□□ 0.15
SNF8-203ENST00000504000 NCALDP61601 193 aa15.98■□□□□ 0.15
SNF8-203ENST00000504000 KLF1Q13351 362 aaPredicted RBP15.98■□□□□ 0.15
SNF8-203ENST00000504000 CCNG2Q16589 344 aa15.98■□□□□ 0.15
SNF8-203ENST00000504000 AOC3Q16853 763 aa15.98■□□□□ 0.15
SNF8-203ENST00000504000 RNF43Q68DV7 783 aa15.98■□□□□ 0.15
SNF8-203ENST00000504000 SPATA21Q7Z572 469 aa15.98■□□□□ 0.15
SNF8-203ENST00000504000 CCDC89Q8N998 374 aa15.98■□□□□ 0.15
SNF8-203ENST00000504000 UHMK1Q8TAS1 419 aaKnown RBP15.98■□□□□ 0.15
SNF8-203ENST00000504000 SPIRE2Q8WWL2 714 aa15.98■□□□□ 0.15
SNF8-203ENST00000504000 PRMT6Q96LA8 375 aaPredicted RBP15.98■□□□□ 0.15
SNF8-203ENST00000504000 CCDC77Q9BR77 488 aa15.98■□□□□ 0.15
SNF8-203ENST00000504000 CCDC113Q9H0I3 377 aa15.98■□□□□ 0.15
SNF8-203ENST00000504000 CHORDC1Q9UHD1 332 aaPredicted RBP15.98■□□□□ 0.15
SNF8-203ENST00000504000 UBOX5O94941 541 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms