RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 ADGRA2Q96PE1 1338 aa24.17■■□□□ 1.46
PCDH1-204ENST00000503492 GOLGA6BA6NDN3 693 aa24.17■■□□□ 1.46
PCDH1-204ENST00000503492 RNF40O75150 1001 aa24.17■■□□□ 1.46
PCDH1-204ENST00000503492 MTA2O94776 668 aa24.17■■□□□ 1.46
PCDH1-204ENST00000503492 FGGP02679 453 aa24.17■■□□□ 1.46
PCDH1-204ENST00000503492 MARK3P27448 753 aa24.17■■□□□ 1.46
PCDH1-204ENST00000503492 NNTQ13423 1086 aa24.17■■□□□ 1.46
PCDH1-204ENST00000503492 GPAT2Q6NUI2 795 aa24.17■■□□□ 1.46
PCDH1-204ENST00000503492 USP50Q70EL3 339 aaPredicted RBP24.17■■□□□ 1.46
PCDH1-204ENST00000503492 TRIM50Q86XT4 487 aa24.17■■□□□ 1.46
PCDH1-204ENST00000503492 EXOC4Q96A65 974 aa24.17■■□□□ 1.46
PCDH1-204ENST00000503492 AZI2Q9H6S1 392 aa24.17■■□□□ 1.46
PCDH1-204ENST00000503492 VNN1O95497 513 aa24.16■■□□□ 1.46
PCDH1-204ENST00000503492 LDHAP00338 332 aaKnown RBP24.16■■□□□ 1.46
PCDH1-204ENST00000503492 PRPF31Q8WWY3 499 aaKnown RBP24.16■■□□□ 1.46
PCDH1-204ENST00000503492 MMP19Q99542 508 aa24.16■■□□□ 1.46
PCDH1-204ENST00000503492 TTLL13PA6NNM8 815 aa24.16■■□□□ 1.46
PCDH1-204ENST00000503492 TMEM110-MUSTN1A8MSY1 372 aa24.16■■□□□ 1.46
PCDH1-204ENST00000503492 CYP1A2P05177 515 aa24.16■■□□□ 1.46
PCDH1-204ENST00000503492 ERVK-9P63128 1117 aa24.16■■□□□ 1.46
PCDH1-204ENST00000503492 CELF3Q5SZQ8 465 aaKnown RBP24.16■■□□□ 1.46
PCDH1-204ENST00000503492 GLG1Q92896 1179 aa24.16■■□□□ 1.46
PCDH1-204ENST00000503492 FAM167AQ96KS9 214 aa24.16■■□□□ 1.46
PCDH1-204ENST00000503492 RNPC3Q96LT9 517 aaKnown RBP24.16■■□□□ 1.46
PCDH1-204ENST00000503492 MPHOSPH6Q99547 160 aaKnown RBP24.16■■□□□ 1.46
PCDH1-204ENST00000503492 BHMG1C9JSJ3 638 aaPredicted RBP24.15■■□□□ 1.46
PCDH1-204ENST00000503492 EPHX2P34913 555 aa24.15■■□□□ 1.46
PCDH1-204ENST00000503492 COPB2P35606 906 aa24.15■■□□□ 1.46
PCDH1-204ENST00000503492 PIK3CAP42336 1068 aa24.15■■□□□ 1.46
PCDH1-204ENST00000503492 ZNF211Q13398 564 aaPredicted RBP24.15■■□□□ 1.46
PCDH1-204ENST00000503492 BIRC3Q13489 604 aa24.15■■□□□ 1.46
PCDH1-204ENST00000503492 KCTD2Q14681 263 aa24.15■■□□□ 1.46
PCDH1-204ENST00000503492 SPOPLQ6IQ16 392 aa24.15■■□□□ 1.46
PCDH1-204ENST00000503492 SYT17Q9BSW7 474 aa24.15■■□□□ 1.46
PCDH1-204ENST00000503492 PRDM4Q9UKN5 801 aa24.15■■□□□ 1.46
PCDH1-204ENST00000503492 NR2E1Q9Y466 385 aa24.15■■□□□ 1.46
PCDH1-204ENST00000503492 LGR5O75473 907 aa24.15■■□□□ 1.46
PCDH1-204ENST00000503492 OSBPP22059 807 aa24.15■■□□□ 1.46
PCDH1-204ENST00000503492 MKRN4PQ13434 485 aaPredicted RBP24.15■■□□□ 1.46
PCDH1-204ENST00000503492 MESDQ14696 234 aa24.15■■□□□ 1.46
PCDH1-204ENST00000503492 SEZ6Q53EL9 994 aa24.15■■□□□ 1.46
PCDH1-204ENST00000503492 WDR44Q5JSH3 913 aa24.15■■□□□ 1.46
PCDH1-204ENST00000503492 FASTKD5Q7L8L6 764 aaKnown RBP24.15■■□□□ 1.46
PCDH1-204ENST00000503492 FBXO16Q8IX29 292 aaPredicted RBP24.15■■□□□ 1.46
PCDH1-204ENST00000503492 ZC3H15Q8WU90 426 aaKnown RBP24.15■■□□□ 1.46
PCDH1-204ENST00000503492 BBXQ8WY36 941 aaPredicted RBP24.15■■□□□ 1.46
PCDH1-204ENST00000503492 ZNF653Q96CK0 615 aa24.15■■□□□ 1.46
PCDH1-204ENST00000503492 L3MBTL3Q96JM7 780 aaPredicted RBP24.15■■□□□ 1.46
PCDH1-204ENST00000503492 FAM81BQ96LP2 452 aa24.15■■□□□ 1.46
PCDH1-204ENST00000503492 GTF3C4Q9UKN8 822 aa24.15■■□□□ 1.46
PCDH1-204ENST00000503492 CNTNAP2Q9UHC6 1331 aa24.15■■□□□ 1.46
PCDH1-204ENST00000503492 ACAD10Q6JQN1 1059 aa24.14■■□□□ 1.46
PCDH1-204ENST00000503492 KCNV1Q6PIU1 500 aa24.14■■□□□ 1.46
PCDH1-204ENST00000503492 KRT35Q92764 455 aa24.14■■□□□ 1.46
PCDH1-204ENST00000503492 NUP85Q9BW27 656 aa24.14■■□□□ 1.46
PCDH1-204ENST00000503492 AMACRQ9UHK6 382 aa24.14■■□□□ 1.46
PCDH1-204ENST00000503492 MCM3APO60318 1980 aa24.14■■□□□ 1.45
PCDH1-204ENST00000503492 ZBTB42B2RXF5 422 aa24.14■■□□□ 1.45
PCDH1-204ENST00000503492 COMTP21964 271 aa24.14■■□□□ 1.45
PCDH1-204ENST00000503492 GJA5P36382 358 aa24.14■■□□□ 1.45
PCDH1-204ENST00000503492 CLEC16AQ2KHT3 1053 aa24.14■■□□□ 1.45
PCDH1-204ENST00000503492 NAA35Q5VZE5 725 aa24.14■■□□□ 1.45
PCDH1-204ENST00000503492 DPY19L2Q6NUT2 758 aa24.14■■□□□ 1.45
PCDH1-204ENST00000503492 RPS6KC1Q96S38 1066 aa24.14■■□□□ 1.45
PCDH1-204ENST00000503492 CGRRF1Q99675 332 aa24.14■■□□□ 1.45
PCDH1-204ENST00000503492 TAF1DQ9H5J8 278 aaPredicted RBP24.14■■□□□ 1.45
PCDH1-204ENST00000503492 SLITRK6Q9H5Y7 841 aa24.14■■□□□ 1.45
PCDH1-204ENST00000503492 TRPC6Q9Y210 931 aa24.14■■□□□ 1.45
PCDH1-204ENST00000503492 MIF4GDA9UHW6 222 aaKnown RBP24.13■■□□□ 1.45
PCDH1-204ENST00000503492 NOP56O00567 594 aaKnown RBP24.13■■□□□ 1.45
PCDH1-204ENST00000503492 HARSP12081 509 aaKnown RBP24.13■■□□□ 1.45
PCDH1-204ENST00000503492 MARCKSL1P49006 195 aa24.13■■□□□ 1.45
PCDH1-204ENST00000503492 TMEM63BQ5T3F8 832 aa24.13■■□□□ 1.45
PCDH1-204ENST00000503492 WDR78Q5VTH9 848 aa24.13■■□□□ 1.45
PCDH1-204ENST00000503492 IER5Q5VY09 327 aa24.13■■□□□ 1.45
PCDH1-204ENST00000503492 ZNF564Q8TBZ8 553 aaPredicted RBP24.13■■□□□ 1.45
PCDH1-204ENST00000503492 BTBD6Q96KE9 485 aa24.13■■□□□ 1.45
PCDH1-204ENST00000503492 APOBEC3GQ9HC16 384 aaKnown RBP24.13■■□□□ 1.45
PCDH1-204ENST00000503492 PSD3Q9NYI0 1048 aa24.13■■□□□ 1.45
PCDH1-204ENST00000503492 PPME1Q9Y570 386 aa24.13■■□□□ 1.45
PCDH1-204ENST00000503492 MSCO60682 206 aa24.13■■□□□ 1.45
PCDH1-204ENST00000503492 GUCY2FP51841 1108 aa24.13■■□□□ 1.45
PCDH1-204ENST00000503492 KCTD19Q17RG1 926 aaPredicted RBP24.13■■□□□ 1.45
PCDH1-204ENST00000503492 CCDC62Q6P9F0 684 aa24.13■■□□□ 1.45
PCDH1-204ENST00000503492 OR5B17Q8NGF7 314 aa24.13■■□□□ 1.45
PCDH1-204ENST00000503492 COPS5Q92905 334 aa24.13■■□□□ 1.45
PCDH1-204ENST00000503492 CCDC113Q9H0I3 377 aa24.13■■□□□ 1.45
PCDH1-204ENST00000503492 FAM204AQ9H8W3 233 aa24.13■■□□□ 1.45
PCDH1-204ENST00000503492 ECHS1P30084 290 aa24.12■■□□□ 1.45
PCDH1-204ENST00000503492 POU5F1Q01860 360 aaKnown RBP24.12■■□□□ 1.45
PCDH1-204ENST00000503492 AADACL2Q6P093 401 aa24.12■■□□□ 1.45
PCDH1-204ENST00000503492 ZPBP2Q6X784 338 aa24.12■■□□□ 1.45
PCDH1-204ENST00000503492 CPNE8Q86YQ8 564 aa24.12■■□□□ 1.45
PCDH1-204ENST00000503492 LRRC71Q8N4P6 559 aa24.12■■□□□ 1.45
PCDH1-204ENST00000503492 ATP8B4Q8TF62 1192 aa24.12■■□□□ 1.45
PCDH1-204ENST00000503492 ZSWIM1Q9BR11 485 aa24.12■■□□□ 1.45
PCDH1-204ENST00000503492 LAMTOR4Q0VGL1 99 aa24.11■■□□□ 1.45
PCDH1-204ENST00000503492 PLCB4Q15147 1175 aa24.11■■□□□ 1.45
PCDH1-204ENST00000503492 PLPPR4Q7Z2D5 763 aa24.11■■□□□ 1.45
PCDH1-204ENST00000503492 DHX37Q8IY37 1157 aaKnown RBP24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms