RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 HARSP12081 509 aaKnown RBP8.79□□□□□ -1
TOPBP1-202ENST00000503338 SLC9A1P19634 815 aa8.79□□□□□ -1
TOPBP1-202ENST00000503338 GRM5P41594 1212 aa8.79□□□□□ -1
TOPBP1-202ENST00000503338 STAT1P42224 750 aa8.79□□□□□ -1
TOPBP1-202ENST00000503338 YARSP54577 528 aaKnown RBP8.79□□□□□ -1
TOPBP1-202ENST00000503338 MFAP3P55082 362 aa8.79□□□□□ -1
TOPBP1-202ENST00000503338 DLG4P78352 724 aa8.79□□□□□ -1
TOPBP1-202ENST00000503338 KRT83P78385 493 aa8.79□□□□□ -1
TOPBP1-202ENST00000503338 ZNF200P98182 395 aaPredicted RBP8.79□□□□□ -1
TOPBP1-202ENST00000503338 HIC1Q14526 733 aa8.79□□□□□ -1
TOPBP1-202ENST00000503338 FAM26DQ5JW98 314 aa8.79□□□□□ -1
TOPBP1-202ENST00000503338 C1orf220Q5T0J3 134 aa8.79□□□□□ -1
TOPBP1-202ENST00000503338 FBXO46Q6PJ61 603 aaPredicted RBP8.79□□□□□ -1
TOPBP1-202ENST00000503338 C15orf39Q6ZRI6 1047 aa8.79□□□□□ -1
TOPBP1-202ENST00000503338 VPS36Q86VN1 386 aa8.79□□□□□ -1
TOPBP1-202ENST00000503338 THNSL1Q8IYQ7 743 aa8.79□□□□□ -1
TOPBP1-202ENST00000503338 SLC43A3Q8NBI5 491 aa8.79□□□□□ -1
TOPBP1-202ENST00000503338 LMO3Q8TAP4 145 aa8.79□□□□□ -1
TOPBP1-202ENST00000503338 CAGE1Q8TC20 777 aa8.79□□□□□ -1
TOPBP1-202ENST00000503338 PLEKHO2Q8TD55 490 aa8.79□□□□□ -1
TOPBP1-202ENST00000503338 JAKMIP2Q96AA8 810 aa8.79□□□□□ -1
TOPBP1-202ENST00000503338 ZNF668Q96K58 619 aaPredicted RBP8.79□□□□□ -1
TOPBP1-202ENST00000503338 NT5C1BQ96P26 610 aa8.79□□□□□ -1
TOPBP1-202ENST00000503338 ACAP3Q96P50 834 aa8.79□□□□□ -1
TOPBP1-202ENST00000503338 PPP1R16BQ96T49 567 aa8.79□□□□□ -1
TOPBP1-202ENST00000503338 TRIM6Q9C030 488 aaPredicted RBP8.79□□□□□ -1
TOPBP1-202ENST00000503338 HAPLN2Q9GZV7 340 aa8.79□□□□□ -1
TOPBP1-202ENST00000503338 PDE11AQ9HCR9 933 aa8.79□□□□□ -1
TOPBP1-202ENST00000503338 LUC7LQ9NQ29 371 aaKnown RBP8.79□□□□□ -1
TOPBP1-202ENST00000503338 TOPORSQ9NS56 1045 aaPredicted RBP8.79□□□□□ -1
TOPBP1-202ENST00000503338 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.79□□□□□ -1
TOPBP1-202ENST00000503338 TSKSQ9UJT2 592 aa8.79□□□□□ -1
TOPBP1-202ENST00000503338 DERAQ9Y315 318 aa8.79□□□□□ -1
TOPBP1-202ENST00000503338 R3HCC1Q9Y3T6 440 aaKnown RBP8.79□□□□□ -1
TOPBP1-202ENST00000503338 CDY2AQ9Y6F7 541 aa8.79□□□□□ -1
TOPBP1-202ENST00000503338 MROH7Q68CQ1 1323 aa8.79□□□□□ -1
TOPBP1-202ENST00000503338 LRRC53A6NM62 1247 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 TTLL13PA6NNM8 815 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 KIF2AO00139 706 aaPredicted RBP8.78□□□□□ -1
TOPBP1-202ENST00000503338 EPHB6O15197 1021 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 XPOTO43592 962 aaKnown RBP8.78□□□□□ -1
TOPBP1-202ENST00000503338 PHACTR2O75167 634 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 RPS6KA5O75582 802 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 CAPN15O75808 1086 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 GFPT2O94808 682 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 C4BPAP04003 597 aaKnown RBP8.78□□□□□ -1
TOPBP1-202ENST00000503338 SERPING1P05155 500 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 CCDC175P0C221 793 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 SKIP12755 728 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 FERP16591 822 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 TBXAS1P24557 533 aaPredicted RBP8.78□□□□□ -1
TOPBP1-202ENST00000503338 HOXA11P31270 313 aaPredicted RBP8.78□□□□□ -1
TOPBP1-202ENST00000503338 PIK3CAP42336 1068 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 GCNT1Q02742 428 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 MGAT3Q09327 533 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 TMEM62Q0P6H9 643 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 BIRC3Q13489 604 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 RAPGEF1Q13905 1077 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 ASIC2Q16515 512 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 EEF1DP3Q658K8 133 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 DPY19L2P1Q6NXN4 242 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 DNAJC5GQ8N7S2 189 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 ZSWIM2Q8NEG5 633 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 SH3TC2Q8TF17 1288 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 DHX38Q92620 1227 aaKnown RBP8.78□□□□□ -1
TOPBP1-202ENST00000503338 TAF4BQ92750 862 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 CPB2Q96IY4 423 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 CCDC42Q96M95 316 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 SENP6Q9GZR1 1112 aaPredicted RBP8.78□□□□□ -1
TOPBP1-202ENST00000503338 RNF208Q9H0X6 261 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 UNC93B1Q9H1C4 597 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 DEF6Q9H4E7 631 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 FAM124BQ9H5Z6 455 aaPredicted RBP8.78□□□□□ -1
TOPBP1-202ENST00000503338 SIX2Q9NPC8 291 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 NLRC4Q9NPP4 1024 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 C1orf112Q9NSG2 853 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 SPTLC3Q9NUV7 552 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 DNAJC12Q9UKB3 198 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 OGDHLQ9ULD0 1010 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 PYCARDQ9ULZ3 195 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 PIN4Q9Y237 131 aaKnown RBP8.78□□□□□ -1
TOPBP1-202ENST00000503338 C2CD2Q9Y426 696 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 GRIN2DO15399 1336 aa8.78□□□□□ -1
TOPBP1-202ENST00000503338 RNF225M0QZC1 329 aaPredicted RBP8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 TLR3O15455 904 aaKnown RBP8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 CSDE1O75534 798 aaKnown RBP8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 PARNO95453 639 aaKnown RBP8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 NPTXRO95502 500 aa8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 HLA-DRAP01903 254 aa8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 ACTN1P12814 892 aa8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 CCL5P13501 91 aa8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 ZSCAN20P17040 1043 aaPredicted RBP8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 ATICP31939 592 aa8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 SOX5P35711 763 aa8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 THPOP40225 353 aa8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 TNFSF9P41273 254 aa8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 PRKCIP41743 596 aa8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 CTCFP49711 727 aaPredicted RBP8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 RAB27AP51159 221 aa8.77□□□□□ -1.01
TOPBP1-202ENST00000503338 JAM2P57087 298 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms